RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 KANSL2Q9H9L4 492 aa24.94■■□□□ 1.58
SPNS3-203ENST00000575185 GOPCQ9HD26 462 aa24.94■■□□□ 1.58
SPNS3-203ENST00000575185 SNAI1O95863 264 aaPredicted RBP24.93■■□□□ 1.58
SPNS3-203ENST00000575185 KCNA10Q16322 511 aa24.93■■□□□ 1.58
SPNS3-203ENST00000575185 KLHDC9Q8NEP7 349 aa24.93■■□□□ 1.58
SPNS3-203ENST00000575185 TOX2Q96NM4 488 aa24.93■■□□□ 1.58
SPNS3-203ENST00000575185 TSEN34Q9BSV6 310 aaKnown RBP24.93■■□□□ 1.58
SPNS3-203ENST00000575185 ZHX1Q9UKY1 873 aaPredicted RBP24.93■■□□□ 1.58
SPNS3-203ENST00000575185 TBX21Q9UL17 535 aa24.93■■□□□ 1.58
SPNS3-203ENST00000575185 RIPK3Q9Y572 518 aa24.93■■□□□ 1.58
SPNS3-203ENST00000575185 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.92■■□□□ 1.58
SPNS3-203ENST00000575185 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.92■■□□□ 1.58
SPNS3-203ENST00000575185 DCDC2CA8MYV0 355 aa24.92■■□□□ 1.58
SPNS3-203ENST00000575185 ADCY6O43306 1168 aa24.92■■□□□ 1.58
SPNS3-203ENST00000575185 SNRNP48Q6IEG0 339 aaKnown RBP24.92■■□□□ 1.58
SPNS3-203ENST00000575185 CCSAPQ6IQ19 270 aaPredicted RBP24.92■■□□□ 1.58
SPNS3-203ENST00000575185 CTR9Q6PD62 1173 aa24.92■■□□□ 1.58
SPNS3-203ENST00000575185 SYMPKQ92797 1274 aaKnown RBP24.92■■□□□ 1.58
SPNS3-203ENST00000575185 TIFAQ96CG3 184 aa24.92■■□□□ 1.58
SPNS3-203ENST00000575185 ZNF576Q9H609 170 aa24.92■■□□□ 1.58
SPNS3-203ENST00000575185 SLC4A4Q9Y6R1 1079 aa24.92■■□□□ 1.58
SPNS3-203ENST00000575185 REV3LO60673 3130 aa24.92■■□□□ 1.58
SPNS3-203ENST00000575185 TIMP1P01033 207 aa24.91■■□□□ 1.58
SPNS3-203ENST00000575185 SIRT2Q8IXJ6 389 aa24.91■■□□□ 1.58
SPNS3-203ENST00000575185 AMOTL1Q8IY63 956 aa24.91■■□□□ 1.58
SPNS3-203ENST00000575185 NUP133Q8WUM0 1156 aa24.91■■□□□ 1.58
SPNS3-203ENST00000575185 FAM184BQ9ULE4 1060 aa24.91■■□□□ 1.58
SPNS3-203ENST00000575185 CHD7Q9P2D1 2997 aa24.9■■□□□ 1.58
SPNS3-203ENST00000575185 SYNGAP1Q96PV0 1343 aa24.9■■□□□ 1.58
SPNS3-203ENST00000575185 MOXD2PA6NHM9 499 aa24.9■■□□□ 1.58
SPNS3-203ENST00000575185 GRXCR1A8MXD5 290 aa24.9■■□□□ 1.58
SPNS3-203ENST00000575185 COPB2P35606 906 aa24.9■■□□□ 1.58
SPNS3-203ENST00000575185 PBX2P40425 430 aa24.9■■□□□ 1.58
SPNS3-203ENST00000575185 SLC4A3P48751 1232 aa24.9■■□□□ 1.58
SPNS3-203ENST00000575185 TJAP1Q5JTD0 557 aa24.9■■□□□ 1.58
SPNS3-203ENST00000575185 C16orf59Q7L2K0 433 aa24.9■■□□□ 1.58
SPNS3-203ENST00000575185 STK11IPQ8N1F8 1099 aa24.9■■□□□ 1.58
SPNS3-203ENST00000575185 SLF1Q9BQI6 1058 aa24.9■■□□□ 1.58
SPNS3-203ENST00000575185 TEX13BQ9BXU2 312 aa24.9■■□□□ 1.58
SPNS3-203ENST00000575185 DNAJC25-GNG10A0A024R161 153 aa24.89■■□□□ 1.58
SPNS3-203ENST00000575185 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.89■■□□□ 1.58
SPNS3-203ENST00000575185 PUS7LQ9H0K6 701 aaKnown RBP24.89■■□□□ 1.58
SPNS3-203ENST00000575185 ATP5JP18859 108 aa24.88■■□□□ 1.57
SPNS3-203ENST00000575185 MFSD5Q6N075 450 aa24.88■■□□□ 1.57
SPNS3-203ENST00000575185 MAMDC4Q6UXC1 1216 aa24.88■■□□□ 1.57
SPNS3-203ENST00000575185 MSL3Q8N5Y2 521 aaKnown RBP24.88■■□□□ 1.57
SPNS3-203ENST00000575185 PPM1EQ8WY54 764 aa24.88■■□□□ 1.57
SPNS3-203ENST00000575185 DDX11Q96FC9 970 aa24.88■■□□□ 1.57
SPNS3-203ENST00000575185 DDRGK1Q96HY6 314 aa24.88■■□□□ 1.57
SPNS3-203ENST00000575185 FGD4Q96M96 766 aa24.88■■□□□ 1.57
SPNS3-203ENST00000575185 HAUS7Q99871 368 aa24.88■■□□□ 1.57
SPNS3-203ENST00000575185 PBX4Q9BYU1 374 aa24.88■■□□□ 1.57
SPNS3-203ENST00000575185 RCAN3Q9UKA8 241 aa24.88■■□□□ 1.57
SPNS3-203ENST00000575185 MYO9BQ13459 2157 aa24.88■■□□□ 1.57
SPNS3-203ENST00000575185 DUSP11O75319 330 aaKnown RBP24.87■■□□□ 1.57
SPNS3-203ENST00000575185 NDUFB10O96000 172 aa24.87■■□□□ 1.57
SPNS3-203ENST00000575185 C6orf222P0C671 652 aaPredicted RBP24.87■■□□□ 1.57
SPNS3-203ENST00000575185 CSF2RAP15509 400 aa24.87■■□□□ 1.57
SPNS3-203ENST00000575185 UBE3CQ15386 1083 aa24.87■■□□□ 1.57
SPNS3-203ENST00000575185 TMEM240Q5SV17 173 aa24.87■■□□□ 1.57
SPNS3-203ENST00000575185 CPXCR1Q8N123 301 aa24.87■■□□□ 1.57
SPNS3-203ENST00000575185 GLT1D1Q96MS3 346 aa24.87■■□□□ 1.57
SPNS3-203ENST00000575185 LRRC37A2A6NM11 1700 aa24.86■■□□□ 1.57
SPNS3-203ENST00000575185 XIRP2A4UGR9 3374 aa24.86■■□□□ 1.57
SPNS3-203ENST00000575185 ASGR1P07306 291 aa24.86■■□□□ 1.57
SPNS3-203ENST00000575185 ACRP10323 421 aa24.86■■□□□ 1.57
SPNS3-203ENST00000575185 RASA1P20936 1047 aa24.86■■□□□ 1.57
SPNS3-203ENST00000575185 CST5P28325 142 aaPredicted RBP24.86■■□□□ 1.57
SPNS3-203ENST00000575185 CDK7P50613 346 aa24.86■■□□□ 1.57
SPNS3-203ENST00000575185 ACVR2BQ13705 512 aa24.86■■□□□ 1.57
SPNS3-203ENST00000575185 PPP1R12CQ9BZL4 782 aa24.86■■□□□ 1.57
SPNS3-203ENST00000575185 PRDM12Q9H4Q4 367 aa24.86■■□□□ 1.57
SPNS3-203ENST00000575185 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.86■■□□□ 1.57
SPNS3-203ENST00000575185 F5H6K3 240 aa24.85■■□□□ 1.57
SPNS3-203ENST00000575185 KLRC3Q07444 240 aa24.85■■□□□ 1.57
SPNS3-203ENST00000575185 PPIGQ13427 754 aaKnown RBP eCLIP24.85■■□□□ 1.57
SPNS3-203ENST00000575185 RASIP1Q5U651 963 aa24.85■■□□□ 1.57
SPNS3-203ENST00000575185 CCDC129Q6ZRS4 1044 aa24.85■■□□□ 1.57
SPNS3-203ENST00000575185 RAVER2Q9HCJ3 691 aaKnown RBP24.85■■□□□ 1.57
SPNS3-203ENST00000575185 ARPP21Q9UBL0 812 aaPredicted RBP24.85■■□□□ 1.57
SPNS3-203ENST00000575185 ELP1O95163 1332 aa24.85■■□□□ 1.57
SPNS3-203ENST00000575185 MROH7Q68CQ1 1323 aa24.85■■□□□ 1.57
SPNS3-203ENST00000575185 CCDC144BQ3MJ40 725 aa24.84■■□□□ 1.57
SPNS3-203ENST00000575185 RPAP2Q8IXW5 612 aaPredicted RBP24.84■■□□□ 1.57
SPNS3-203ENST00000575185 VTI1AQ96AJ9 217 aa24.84■■□□□ 1.57
SPNS3-203ENST00000575185 UPF3AQ9H1J1 476 aaKnown RBP24.84■■□□□ 1.57
SPNS3-203ENST00000575185 TNFRSF10AO00220 468 aa24.83■■□□□ 1.57
SPNS3-203ENST00000575185 ZNF365Q70YC5 407 aa24.83■■□□□ 1.57
SPNS3-203ENST00000575185 ZNF467Q7Z7K2 595 aaPredicted RBP24.83■■□□□ 1.57
SPNS3-203ENST00000575185 FAM126BQ8IXS8 530 aa24.83■■□□□ 1.57
SPNS3-203ENST00000575185 PRPF38AQ8NAV1 312 aaKnown RBP24.83■■□□□ 1.57
SPNS3-203ENST00000575185 KIFC2Q96AC6 838 aa24.83■■□□□ 1.57
SPNS3-203ENST00000575185 GAS2L1Q99501 681 aaPredicted RBP24.83■■□□□ 1.57
SPNS3-203ENST00000575185 NYAP2Q9P242 653 aa24.83■■□□□ 1.57
SPNS3-203ENST00000575185 A0A0U1RQG5 324 aaPredicted RBP24.82■■□□□ 1.56
SPNS3-203ENST00000575185 ARVCFO00192 962 aa24.82■■□□□ 1.56
SPNS3-203ENST00000575185 RAB11FIP3O75154 756 aa24.82■■□□□ 1.56
SPNS3-203ENST00000575185 HMMRO75330 724 aa24.82■■□□□ 1.56
SPNS3-203ENST00000575185 GJA9P57773 515 aa24.82■■□□□ 1.56
SPNS3-203ENST00000575185 ARMCX2Q7L311 632 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms