RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 GUCA1BQ9UMX6 200 aa21.47■■□□□ 1.03
SCARF1-206ENST00000573852 PMS1P54277 932 aaKnown RBP21.47■■□□□ 1.03
SCARF1-206ENST00000573852 UBE4AQ14139 1066 aa21.47■■□□□ 1.03
SCARF1-206ENST00000573852 ZSCAN26Q16670 478 aa21.47■■□□□ 1.03
SCARF1-206ENST00000573852 VPS18Q9P253 973 aa21.47■■□□□ 1.03
SCARF1-206ENST00000573852 COL22A1Q8NFW1 1626 aaPredicted RBP21.47■■□□□ 1.03
SCARF1-206ENST00000573852 FAM205AQ6ZU69 1335 aa21.46■■□□□ 1.03
SCARF1-206ENST00000573852 H7C1D1 291 aa21.46■■□□□ 1.03
SCARF1-206ENST00000573852 CYP2D6P10635 497 aa21.46■■□□□ 1.03
SCARF1-206ENST00000573852 LONP1P36776 959 aaKnown RBP21.46■■□□□ 1.03
SCARF1-206ENST00000573852 STAT6P42226 847 aa21.46■■□□□ 1.03
SCARF1-206ENST00000573852 RAD51AP2Q09MP3 1159 aa21.46■■□□□ 1.03
SCARF1-206ENST00000573852 ADSSL1Q8N142 457 aa21.46■■□□□ 1.03
SCARF1-206ENST00000573852 TMEM51Q9NW97 253 aa21.46■■□□□ 1.03
SCARF1-206ENST00000573852 CAVIN4Q5BKX8 364 aa21.46■■□□□ 1.03
SCARF1-206ENST00000573852 ARL6IP4Q66PJ3 421 aaKnown RBP21.46■■□□□ 1.03
SCARF1-206ENST00000573852 ANKRD18AQ8IVF6 992 aa21.46■■□□□ 1.03
SCARF1-206ENST00000573852 MB21D1Q8N884 522 aa21.46■■□□□ 1.03
SCARF1-206ENST00000573852 DCP1AQ9NPI6 582 aaPredicted RBP21.46■■□□□ 1.03
SCARF1-206ENST00000573852 LAMB2P55268 1798 aa21.46■■□□□ 1.03
SCARF1-206ENST00000573852 NAALADL2Q58DX5 795 aa21.45■■□□□ 1.02
SCARF1-206ENST00000573852 MSL3Q8N5Y2 521 aaKnown RBP21.45■■□□□ 1.02
SCARF1-206ENST00000573852 RASGRP4Q8TDF6 673 aa21.45■■□□□ 1.02
SCARF1-206ENST00000573852 NSUN4Q96CB9 384 aaKnown RBP21.45■■□□□ 1.02
SCARF1-206ENST00000573852 TFR2Q9UP52 801 aa21.45■■□□□ 1.02
SCARF1-206ENST00000573852 ITPK1Q13572 414 aa21.45■■□□□ 1.02
SCARF1-206ENST00000573852 CASP8Q14790 479 aa21.45■■□□□ 1.02
SCARF1-206ENST00000573852 OR8K1Q8NGG5 319 aa21.45■■□□□ 1.02
SCARF1-206ENST00000573852 DOT1LQ8TEK3 1739 aa21.45■■□□□ 1.02
SCARF1-206ENST00000573852 MYH14Q7Z406 1995 aaKnown RBP21.45■■□□□ 1.02
SCARF1-206ENST00000573852 PP2D1A8MPX8 630 aa21.44■■□□□ 1.02
SCARF1-206ENST00000573852 MECOMQ03112 1051 aa21.44■■□□□ 1.02
SCARF1-206ENST00000573852 RCSD1Q6JBY9 416 aa21.44■■□□□ 1.02
SCARF1-206ENST00000573852 BLIDQ8IZY5 108 aa21.44■■□□□ 1.02
SCARF1-206ENST00000573852 GPKOWQ92917 476 aaPredicted RBP eCLIP21.44■■□□□ 1.02
SCARF1-206ENST00000573852 DISC1Q9NRI5 854 aa21.44■■□□□ 1.02
SCARF1-206ENST00000573852 HDAC6Q9UBN7 1215 aa21.44■■□□□ 1.02
SCARF1-206ENST00000573852 WDR59Q6PJI9 974 aa21.44■■□□□ 1.02
SCARF1-206ENST00000573852 ZNF507Q8TCN5 953 aa21.44■■□□□ 1.02
SCARF1-206ENST00000573852 MINPP1Q9UNW1 487 aa21.44■■□□□ 1.02
SCARF1-206ENST00000573852 LGALS16A8MUM7 142 aa21.43■■□□□ 1.02
SCARF1-206ENST00000573852 ENC1O14682 589 aa21.43■■□□□ 1.02
SCARF1-206ENST00000573852 EIF3JO75822 258 aaKnown RBP21.43■■□□□ 1.02
SCARF1-206ENST00000573852 KLRK1P26718 216 aa21.43■■□□□ 1.02
SCARF1-206ENST00000573852 ERFEQ4G0M1 354 aa21.43■■□□□ 1.02
SCARF1-206ENST00000573852 TRAPPC11Q7Z392 1133 aa21.43■■□□□ 1.02
SCARF1-206ENST00000573852 DNAJC7Q99615 494 aa21.43■■□□□ 1.02
SCARF1-206ENST00000573852 FAN1Q9Y2M0 1017 aa21.43■■□□□ 1.02
SCARF1-206ENST00000573852 LUC7L2Q9Y383 392 aaKnown RBP21.43■■□□□ 1.02
SCARF1-206ENST00000573852 PES1O00541 588 aaKnown RBP21.43■■□□□ 1.02
SCARF1-206ENST00000573852 HERVK_113P62684 666 aa21.43■■□□□ 1.02
SCARF1-206ENST00000573852 BSDC1Q9NW68 430 aaPredicted RBP21.43■■□□□ 1.02
SCARF1-206ENST00000573852 ACSBG1Q96GR2 724 aa21.42■■□□□ 1.02
SCARF1-206ENST00000573852 SCN7AQ01118 1682 aa21.42■■□□□ 1.02
SCARF1-206ENST00000573852 LOC102724428A0A0B4J2F2 783 aa21.42■■□□□ 1.02
SCARF1-206ENST00000573852 PSMD14O00487 310 aa21.42■■□□□ 1.02
SCARF1-206ENST00000573852 KLRC4O43908 158 aa21.42■■□□□ 1.02
SCARF1-206ENST00000573852 CALML3P27482 149 aa21.42■■□□□ 1.02
SCARF1-206ENST00000573852 SIK1P57059 783 aa21.42■■□□□ 1.02
SCARF1-206ENST00000573852 SLC4A8Q2Y0W8 1093 aa21.42■■□□□ 1.02
SCARF1-206ENST00000573852 PLIN2Q99541 437 aa21.42■■□□□ 1.02
SCARF1-206ENST00000573852 GBP3Q9H0R5 595 aa21.42■■□□□ 1.02
SCARF1-206ENST00000573852 TMEM60Q9H2L4 133 aa21.42■■□□□ 1.02
SCARF1-206ENST00000573852 TSPY2A6NKD2 308 aa21.42■■□□□ 1.02
SCARF1-206ENST00000573852 LRRIQ3A6PVS8 624 aaPredicted RBP21.42■■□□□ 1.02
SCARF1-206ENST00000573852 TYW1BQ6NUM6 668 aa21.42■■□□□ 1.02
SCARF1-206ENST00000573852 CRNKL1Q9BZJ0 848 aaKnown RBP21.42■■□□□ 1.02
SCARF1-206ENST00000573852 CAPN11Q9UMQ6 739 aa21.42■■□□□ 1.02
SCARF1-206ENST00000573852 PCDHA4Q9UN74 947 aa21.42■■□□□ 1.02
SCARF1-206ENST00000573852 A0A1W2PQC6 194 aa21.41■■□□□ 1.02
SCARF1-206ENST00000573852 WDR93Q6P2C0 686 aa21.41■■□□□ 1.02
SCARF1-206ENST00000573852 GOLGA5Q8TBA6 731 aa21.41■■□□□ 1.02
SCARF1-206ENST00000573852 HAUS4Q9H6D7 363 aa21.41■■□□□ 1.02
SCARF1-206ENST00000573852 PDS5AQ29RF7 1337 aaKnown RBP21.41■■□□□ 1.02
SCARF1-206ENST00000573852 ZNF335Q9H4Z2 1342 aaPredicted RBP21.41■■□□□ 1.02
SCARF1-206ENST00000573852 ATP1A1P05023 1023 aaKnown RBP21.41■■□□□ 1.02
SCARF1-206ENST00000573852 EEF1GP26641 437 aaKnown RBP21.41■■□□□ 1.02
SCARF1-206ENST00000573852 DTHD1Q6ZMT9 781 aa21.41■■□□□ 1.02
SCARF1-206ENST00000573852 FBXO33Q7Z6M2 555 aa21.41■■□□□ 1.02
SCARF1-206ENST00000573852 STAG2Q8N3U4 1231 aa21.41■■□□□ 1.02
SCARF1-206ENST00000573852 LRRC15Q8TF66 581 aa21.41■■□□□ 1.02
SCARF1-206ENST00000573852 KIF5BP33176 963 aa21.4■■□□□ 1.02
SCARF1-206ENST00000573852 ACTN2P35609 894 aa21.4■■□□□ 1.02
SCARF1-206ENST00000573852 KCNB1Q14721 858 aa21.4■■□□□ 1.02
SCARF1-206ENST00000573852 CELF1Q92879 486 aaKnown RBP21.4■■□□□ 1.02
SCARF1-206ENST00000573852 MMS19Q96T76 1030 aa21.4■■□□□ 1.02
SCARF1-206ENST00000573852 SRGAP2O75044 1071 aa21.4■■□□□ 1.02
SCARF1-206ENST00000573852 TUBBP07437 444 aa21.4■■□□□ 1.02
SCARF1-206ENST00000573852 CCDC122Q5T0U0 273 aa21.4■■□□□ 1.02
SCARF1-206ENST00000573852 CCDC148Q8NFR7 591 aa21.4■■□□□ 1.02
SCARF1-206ENST00000573852 RASSF8Q8NHQ8 419 aa21.4■■□□□ 1.02
SCARF1-206ENST00000573852 TRIM47Q96LD4 638 aa21.4■■□□□ 1.02
SCARF1-206ENST00000573852 THAP9Q9H5L6 903 aa21.4■■□□□ 1.02
SCARF1-206ENST00000573852 ATP8A2Q9NTI2 1148 aa21.4■■□□□ 1.02
SCARF1-206ENST00000573852 RNF216Q9NWF9 866 aaPredicted RBP21.4■■□□□ 1.02
SCARF1-206ENST00000573852 M0R2N6 131 aa21.39■■□□□ 1.01
SCARF1-206ENST00000573852 ADAMTS2O95450 1211 aa21.39■■□□□ 1.01
SCARF1-206ENST00000573852 LAMB1P07942 1786 aa21.39■■□□□ 1.01
SCARF1-206ENST00000573852 PRDX5P30044 214 aa21.39■■□□□ 1.01
SCARF1-206ENST00000573852 SF3B3Q15393 1217 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms