RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 OLFML2BQ68BL8 750 aa15.04■□□□□ -0
NPLOC4-213ENST00000573519 LHX8Q68G74 356 aa15.04■□□□□ -0
NPLOC4-213ENST00000573519 CWC27Q6UX04 472 aaKnown RBP15.04■□□□□ -0
NPLOC4-213ENST00000573519 REPS2Q8NFH8 660 aa15.04■□□□□ -0
NPLOC4-213ENST00000573519 TEX13BQ9BXU2 312 aa15.04■□□□□ -0
NPLOC4-213ENST00000573519 DDX20Q9UHI6 824 aaKnown RBP15.04■□□□□ -0
NPLOC4-213ENST00000573519 SYNPO2Q9UMS6 1093 aa15.04■□□□□ -0
NPLOC4-213ENST00000573519 COLQQ9Y215 455 aaPredicted RBP15.04■□□□□ -0
NPLOC4-213ENST00000573519 MYH4Q9Y623 1939 aa15.04■□□□□ -0
NPLOC4-213ENST00000573519 COL11A1P12107 1806 aaPredicted RBP15.03■□□□□ -0
NPLOC4-213ENST00000573519 TMEM232C9JQI7 657 aa15.03■□□□□ -0
NPLOC4-213ENST00000573519 SLC1A4P43007 532 aa15.03■□□□□ -0
NPLOC4-213ENST00000573519 HABP4Q5JVS0 413 aaKnown RBP15.03■□□□□ -0
NPLOC4-213ENST00000573519 MAML3Q96JK9 1138 aa15.03■□□□□ -0
NPLOC4-213ENST00000573519 RAVER2Q9HCJ3 691 aaKnown RBP15.03■□□□□ -0
NPLOC4-213ENST00000573519 IL17RBQ9NRM6 502 aa15.03■□□□□ -0
NPLOC4-213ENST00000573519 TACC3Q9Y6A5 838 aa15.03■□□□□ -0
NPLOC4-213ENST00000573519 ORC4O43929 436 aa15.02■□□□□ -0
NPLOC4-213ENST00000573519 CYBAP13498 195 aa15.02■□□□□ -0
NPLOC4-213ENST00000573519 MCCP23508 829 aa15.02■□□□□ -0
NPLOC4-213ENST00000573519 PDE4AP27815 886 aa15.02■□□□□ -0
NPLOC4-213ENST00000573519 MNX1P50219 401 aaPredicted RBP15.02■□□□□ -0
NPLOC4-213ENST00000573519 STAT2P52630 851 aa15.02■□□□□ -0
NPLOC4-213ENST00000573519 PRAMEF19Q5SWL8 479 aa15.02■□□□□ -0
NPLOC4-213ENST00000573519 CHRDL2Q6WN34 429 aa15.02■□□□□ -0
NPLOC4-213ENST00000573519 C7orf61Q8IZ16 206 aa15.02■□□□□ -0
NPLOC4-213ENST00000573519 TRPV1Q8NER1 839 aa15.02■□□□□ -0
NPLOC4-213ENST00000573519 RIPK3Q9Y572 518 aa15.02■□□□□ -0
NPLOC4-213ENST00000573519 HIP1O00291 1037 aa15.01□□□□□ -0.01
NPLOC4-213ENST00000573519 MSCO60682 206 aa15.01□□□□□ -0.01
NPLOC4-213ENST00000573519 SLC34A2O95436 690 aa15.01□□□□□ -0.01
NPLOC4-213ENST00000573519 MYCNP04198 464 aaPredicted RBP15.01□□□□□ -0.01
NPLOC4-213ENST00000573519 ANO1Q5XXA6 986 aa15.01□□□□□ -0.01
NPLOC4-213ENST00000573519 MFSD6Q6ZSS7 791 aa15.01□□□□□ -0.01
NPLOC4-213ENST00000573519 KCTD1Q719H9 257 aa15.01□□□□□ -0.01
NPLOC4-213ENST00000573519 DDX11Q96FC9 970 aa15.01□□□□□ -0.01
NPLOC4-213ENST00000573519 SLC38A10Q9HBR0 1119 aa15.01□□□□□ -0.01
NPLOC4-213ENST00000573519 ZMYM6O95789 1325 aa15□□□□□ -0.01
NPLOC4-213ENST00000573519 CCDC96Q2M329 555 aa15□□□□□ -0.01
NPLOC4-213ENST00000573519 RASGRP2Q7LDG7 609 aa15□□□□□ -0.01
NPLOC4-213ENST00000573519 FAM160B2Q86V87 743 aa15□□□□□ -0.01
NPLOC4-213ENST00000573519 CHURC1Q8WUH1 139 aa15□□□□□ -0.01
NPLOC4-213ENST00000573519 GMCL1Q96IK5 515 aa15□□□□□ -0.01
NPLOC4-213ENST00000573519 HOMER2Q9NSB8 354 aa15□□□□□ -0.01
NPLOC4-213ENST00000573519 PFASO15067 1338 aa14.99□□□□□ -0.01
NPLOC4-213ENST00000573519 ZNF213O14771 459 aa14.99□□□□□ -0.01
NPLOC4-213ENST00000573519 ATP2A1O14983 1001 aa14.99□□□□□ -0.01
NPLOC4-213ENST00000573519 IGHA2P01877 340 aa14.99□□□□□ -0.01
NPLOC4-213ENST00000573519 FGRP09769 529 aa14.99□□□□□ -0.01
NPLOC4-213ENST00000573519 ZNF792Q3KQV3 632 aa14.99□□□□□ -0.01
NPLOC4-213ENST00000573519 AKNAD1Q5T1N1 836 aa14.99□□□□□ -0.01
NPLOC4-213ENST00000573519 RCSD1Q6JBY9 416 aa14.99□□□□□ -0.01
NPLOC4-213ENST00000573519 TBC1D10CQ8IV04 446 aa14.99□□□□□ -0.01
NPLOC4-213ENST00000573519 ANKRD35Q8N283 1001 aa14.99□□□□□ -0.01
NPLOC4-213ENST00000573519 STAG1Q8WVM7 1258 aa14.99□□□□□ -0.01
NPLOC4-213ENST00000573519 TINF2Q9BSI4 451 aa14.99□□□□□ -0.01
NPLOC4-213ENST00000573519 RNF41Q9H4P4 317 aaPredicted RBP14.99□□□□□ -0.01
NPLOC4-213ENST00000573519 SEPT4O43236 478 aa14.98□□□□□ -0.01
NPLOC4-213ENST00000573519 OAZ1P54368 228 aa14.98□□□□□ -0.01
NPLOC4-213ENST00000573519 SNAP25P60880 206 aa14.98□□□□□ -0.01
NPLOC4-213ENST00000573519 GJC2Q5T442 439 aaPredicted RBP14.98□□□□□ -0.01
NPLOC4-213ENST00000573519 TTC22Q5TAA0 569 aa14.98□□□□□ -0.01
NPLOC4-213ENST00000573519 CCDC174Q6PII3 467 aa14.98□□□□□ -0.01
NPLOC4-213ENST00000573519 SENP6Q9GZR1 1112 aaPredicted RBP14.98□□□□□ -0.01
NPLOC4-213ENST00000573519 FBXO40Q9UH90 709 aa14.98□□□□□ -0.01
NPLOC4-213ENST00000573519 ZMYND8Q9ULU4 1186 aaPredicted RBP14.98□□□□□ -0.01
NPLOC4-213ENST00000573519 DIS3Q9Y2L1 958 aaKnown RBP14.98□□□□□ -0.01
NPLOC4-213ENST00000573519 NEDD4P46934 1319 aa14.97□□□□□ -0.01
NPLOC4-213ENST00000573519 FRMPD2Q68DX3 1309 aaPredicted RBP14.97□□□□□ -0.01
NPLOC4-213ENST00000573519 FRMPD3Q5JV73 1810 aa14.97□□□□□ -0.01
NPLOC4-213ENST00000573519 FDX1P10109 184 aa14.97□□□□□ -0.01
NPLOC4-213ENST00000573519 TOP1P11387 765 aaKnown RBP14.97□□□□□ -0.01
NPLOC4-213ENST00000573519 PCP11498 1178 aaKnown RBP14.97□□□□□ -0.01
NPLOC4-213ENST00000573519 COL6A1P12109 1028 aa14.97□□□□□ -0.01
NPLOC4-213ENST00000573519 SYN1P17600 705 aa14.97□□□□□ -0.01
NPLOC4-213ENST00000573519 ARRDC4Q8NCT1 418 aa14.97□□□□□ -0.01
NPLOC4-213ENST00000573519 CHST13Q8NET6 341 aa14.97□□□□□ -0.01
NPLOC4-213ENST00000573519 DCAF4Q8WV16 495 aa14.97□□□□□ -0.01
NPLOC4-213ENST00000573519 ESR2Q92731 530 aa14.97□□□□□ -0.01
NPLOC4-213ENST00000573519 AGBL1Q96MI9 1066 aa14.97□□□□□ -0.01
NPLOC4-213ENST00000573519 TMEM47Q9BQJ4 181 aa14.97□□□□□ -0.01
NPLOC4-213ENST00000573519 ZKSCAN3Q9BRR0 538 aa14.97□□□□□ -0.01
NPLOC4-213ENST00000573519 RBM27Q9P2N5 1060 aaKnown RBP14.97□□□□□ -0.01
NPLOC4-213ENST00000573519 CNPY2Q9Y2B0 182 aa14.97□□□□□ -0.01
NPLOC4-213ENST00000573519 KBTBD13C9JR72 458 aa14.96□□□□□ -0.01
NPLOC4-213ENST00000573519 DNM1LO00429 736 aa14.96□□□□□ -0.01
NPLOC4-213ENST00000573519 ALAS1P13196 640 aa14.96□□□□□ -0.01
NPLOC4-213ENST00000573519 GSPT1P15170 499 aaKnown RBP14.96□□□□□ -0.01
NPLOC4-213ENST00000573519 TAL1P17542 331 aaPredicted RBP14.96□□□□□ -0.01
NPLOC4-213ENST00000573519 ATN1P54259 1190 aaPredicted RBP14.96□□□□□ -0.01
NPLOC4-213ENST00000573519 IMMTQ16891 758 aaKnown RBP14.96□□□□□ -0.01
NPLOC4-213ENST00000573519 LRRC26Q2I0M4 334 aa14.96□□□□□ -0.01
NPLOC4-213ENST00000573519 ACAD9Q9H845 621 aa14.96□□□□□ -0.01
NPLOC4-213ENST00000573519 GPCPD1Q9NPB8 672 aa14.96□□□□□ -0.01
NPLOC4-213ENST00000573519 RNF146Q9NTX7 359 aa14.96□□□□□ -0.01
NPLOC4-213ENST00000573519 TCP11L1Q9NUJ3 509 aa14.96□□□□□ -0.01
NPLOC4-213ENST00000573519 PRR12Q9ULL5 1215 aa14.96□□□□□ -0.01
NPLOC4-213ENST00000573519 PLA2G6O60733 806 aa14.95□□□□□ -0.02
NPLOC4-213ENST00000573519 RARBP10826 455 aa14.95□□□□□ -0.02
NPLOC4-213ENST00000573519 SLC16A2P36021 539 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms