RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 TRIM47Q96LD4 638 aa20.18■□□□□ 0.82
LITAF-212ENST00000573332 ARHGAP39Q9C0H5 1083 aa20.18■□□□□ 0.82
LITAF-212ENST00000573332 SPATC1LQ9H0A9 340 aa20.18■□□□□ 0.82
LITAF-212ENST00000573332 GPHNQ9NQX3 736 aaPredicted RBP20.18■□□□□ 0.82
LITAF-212ENST00000573332 ZNF214Q9UL59 606 aaPredicted RBP20.18■□□□□ 0.82
LITAF-212ENST00000573332 PRR12Q9ULL5 1215 aa20.18■□□□□ 0.82
LITAF-212ENST00000573332 A0A0G2JMZ2 1700 aa20.17■□□□□ 0.82
LITAF-212ENST00000573332 PARP1P09874 1014 aaKnown RBP20.17■□□□□ 0.82
LITAF-212ENST00000573332 RPS6KB1P23443 525 aa20.17■□□□□ 0.82
LITAF-212ENST00000573332 OAZ1P54368 228 aa20.17■□□□□ 0.82
LITAF-212ENST00000573332 PRMT2P55345 433 aa20.17■□□□□ 0.82
LITAF-212ENST00000573332 PKN2Q16513 984 aaKnown RBP20.17■□□□□ 0.82
LITAF-212ENST00000573332 MOV10L1Q9BXT6 1211 aaKnown RBP20.17■□□□□ 0.82
LITAF-212ENST00000573332 AGXT2Q9BYV1 514 aa20.17■□□□□ 0.82
LITAF-212ENST00000573332 GPCPD1Q9NPB8 672 aa20.17■□□□□ 0.82
LITAF-212ENST00000573332 ISY1Q9ULR0 285 aaKnown RBP20.17■□□□□ 0.82
LITAF-212ENST00000573332 FRMPD2Q68DX3 1309 aaPredicted RBP20.17■□□□□ 0.82
LITAF-212ENST00000573332 PALM3A6NDB9 673 aaPredicted RBP20.16■□□□□ 0.82
LITAF-212ENST00000573332 CCDC69A6NI79 296 aa20.16■□□□□ 0.82
LITAF-212ENST00000573332 DDAH1O94760 285 aa20.16■□□□□ 0.82
LITAF-212ENST00000573332 FMNL1O95466 1100 aaPredicted RBP20.16■□□□□ 0.82
LITAF-212ENST00000573332 CASTP20810 708 aaKnown RBP20.16■□□□□ 0.82
LITAF-212ENST00000573332 HOXD10P28358 340 aa20.16■□□□□ 0.82
LITAF-212ENST00000573332 IKQ13123 557 aaPredicted RBP20.16■□□□□ 0.82
LITAF-212ENST00000573332 GRM4Q14833 912 aa20.16■□□□□ 0.82
LITAF-212ENST00000573332 SYDE2Q5VT97 1194 aa20.16■□□□□ 0.82
LITAF-212ENST00000573332 SAMD1Q6SPF0 538 aaPredicted RBP20.16■□□□□ 0.82
LITAF-212ENST00000573332 RUFY3Q7L099 469 aa20.16■□□□□ 0.82
LITAF-212ENST00000573332 RIOX2Q8IUF8 465 aa20.16■□□□□ 0.82
LITAF-212ENST00000573332 ZNF654Q8IZM8 581 aa20.16■□□□□ 0.82
LITAF-212ENST00000573332 CHMP4CQ96CF2 233 aa20.16■□□□□ 0.82
LITAF-212ENST00000573332 LRRC2Q9BYS8 371 aa20.16■□□□□ 0.82
LITAF-212ENST00000573332 PORCNQ9H237 461 aa20.16■□□□□ 0.82
LITAF-212ENST00000573332 TRIM17Q9Y577 477 aa20.16■□□□□ 0.82
LITAF-212ENST00000573332 TNPO2O14787 897 aaKnown RBP20.15■□□□□ 0.82
LITAF-212ENST00000573332 SLC25A27O95847 323 aa20.15■□□□□ 0.82
LITAF-212ENST00000573332 GOLGA8HP0CJ92 632 aa20.15■□□□□ 0.82
LITAF-212ENST00000573332 COPB2P35606 906 aa20.15■□□□□ 0.82
LITAF-212ENST00000573332 STAT3P40763 770 aa20.15■□□□□ 0.82
LITAF-212ENST00000573332 COL13A1Q5TAT6 717 aaPredicted RBP20.15■□□□□ 0.82
LITAF-212ENST00000573332 NFXL1Q6ZNB6 911 aa20.15■□□□□ 0.82
LITAF-212ENST00000573332 COA7Q96BR5 231 aa20.15■□□□□ 0.82
LITAF-212ENST00000573332 TCEANC2Q96MN5 208 aa20.15■□□□□ 0.82
LITAF-212ENST00000573332 TEX13BQ9BXU2 312 aa20.15■□□□□ 0.82
LITAF-212ENST00000573332 RANBP17Q9H2T7 1088 aaKnown RBP20.15■□□□□ 0.82
LITAF-212ENST00000573332 MAD2L2Q9UI95 211 aa20.15■□□□□ 0.82
LITAF-212ENST00000573332 PARP14Q460N5 1801 aa20.15■□□□□ 0.82
LITAF-212ENST00000573332 CASP8AP2Q9UKL3 1982 aa20.15■□□□□ 0.82
LITAF-212ENST00000573332 CALM1P0DP23 149 aa20.14■□□□□ 0.81
LITAF-212ENST00000573332 CALM2P0DP24 149 aa20.14■□□□□ 0.81
LITAF-212ENST00000573332 CALM3P0DP25 149 aa20.14■□□□□ 0.81
LITAF-212ENST00000573332 CPA1P15085 419 aa20.14■□□□□ 0.81
LITAF-212ENST00000573332 SLC16A2P36021 539 aa20.14■□□□□ 0.81
LITAF-212ENST00000573332 MROH8Q9H579 483 aa20.14■□□□□ 0.81
LITAF-212ENST00000573332 SRRDQ9UH36 339 aa20.14■□□□□ 0.81
LITAF-212ENST00000573332 CTDP1Q9Y5B0 961 aaPredicted RBP20.14■□□□□ 0.81
LITAF-212ENST00000573332 SLC12A7Q9Y666 1083 aa20.14■□□□□ 0.81
LITAF-212ENST00000573332 CYP46A1Q9Y6A2 500 aa20.14■□□□□ 0.81
LITAF-212ENST00000573332 ZNF536O15090 1300 aa20.13■□□□□ 0.81
LITAF-212ENST00000573332 KLRF2D3W0D1 207 aa20.13■□□□□ 0.81
LITAF-212ENST00000573332 RCAN1P53805 252 aa20.13■□□□□ 0.81
LITAF-212ENST00000573332 PLS1Q14651 629 aa20.13■□□□□ 0.81
LITAF-212ENST00000573332 Q6ZUG5 572 aa20.13■□□□□ 0.81
LITAF-212ENST00000573332 GPR142Q7Z601 462 aa20.13■□□□□ 0.81
LITAF-212ENST00000573332 PLEKHH3Q7Z736 793 aa20.13■□□□□ 0.81
LITAF-212ENST00000573332 CCAR1Q8IX12 1150 aaKnown RBP20.13■□□□□ 0.81
LITAF-212ENST00000573332 STAG2Q8N3U4 1231 aa20.13■□□□□ 0.81
LITAF-212ENST00000573332 UBA5Q9GZZ9 404 aa20.13■□□□□ 0.81
LITAF-212ENST00000573332 GJD2Q9UKL4 321 aa20.13■□□□□ 0.81
LITAF-212ENST00000573332 PNMA2Q9UL42 364 aa20.13■□□□□ 0.81
LITAF-212ENST00000573332 PTPN22Q9Y2R2 807 aa20.13■□□□□ 0.81
LITAF-212ENST00000573332 STRNO43815 780 aa20.12■□□□□ 0.81
LITAF-212ENST00000573332 ERCC3P19447 782 aa20.12■□□□□ 0.81
LITAF-212ENST00000573332 KIF5BP33176 963 aa20.12■□□□□ 0.81
LITAF-212ENST00000573332 FBXO46Q6PJ61 603 aaPredicted RBP20.12■□□□□ 0.81
LITAF-212ENST00000573332 APOA5Q6Q788 366 aa20.12■□□□□ 0.81
LITAF-212ENST00000573332 SYNE3Q6ZMZ3 975 aa20.12■□□□□ 0.81
LITAF-212ENST00000573332 RAVER2Q9HCJ3 691 aaKnown RBP20.12■□□□□ 0.81
LITAF-212ENST00000573332 PTPREP23469 700 aa20.11■□□□□ 0.81
LITAF-212ENST00000573332 SMARCA1P28370 1054 aa20.11■□□□□ 0.81
LITAF-212ENST00000573332 EVCP57679 992 aa20.11■□□□□ 0.81
LITAF-212ENST00000573332 FGD1P98174 961 aa20.11■□□□□ 0.81
LITAF-212ENST00000573332 MORN1Q5T089 497 aa20.11■□□□□ 0.81
LITAF-212ENST00000573332 SNRNP48Q6IEG0 339 aaKnown RBP20.11■□□□□ 0.81
LITAF-212ENST00000573332 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.11■□□□□ 0.81
LITAF-212ENST00000573332 ADGRF4Q8IZF3 695 aa20.11■□□□□ 0.81
LITAF-212ENST00000573332 ABRAQ8N0Z2 381 aa20.11■□□□□ 0.81
LITAF-212ENST00000573332 CPXCR1Q8N123 301 aa20.11■□□□□ 0.81
LITAF-212ENST00000573332 CTCFLQ8NI51 663 aaPredicted RBP20.11■□□□□ 0.81
LITAF-212ENST00000573332 NUP133Q8WUM0 1156 aa20.11■□□□□ 0.81
LITAF-212ENST00000573332 ALDH8A1Q9H2A2 487 aaPredicted RBP20.11■□□□□ 0.81
LITAF-212ENST00000573332 BRPF3Q9ULD4 1205 aa20.11■□□□□ 0.81
LITAF-212ENST00000573332 SLC15A5A6NIM6 579 aa20.1■□□□□ 0.81
LITAF-212ENST00000573332 ICAM1P05362 532 aa20.1■□□□□ 0.81
LITAF-212ENST00000573332 RBM25P49756 843 aaKnown RBP20.1■□□□□ 0.81
LITAF-212ENST00000573332 GNAQP50148 359 aa20.1■□□□□ 0.81
LITAF-212ENST00000573332 IRF5Q13568 498 aa20.1■□□□□ 0.81
LITAF-212ENST00000573332 TKFCQ3LXA3 575 aa20.1■□□□□ 0.81
LITAF-212ENST00000573332 NCAPG2Q86XI2 1143 aa20.1■□□□□ 0.81
LITAF-212ENST00000573332 FANCBQ8NB91 859 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms