RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 BMS1Q14692 1282 aaKnown RBP12.68□□□□□ -0.38
RPAIN-212ENST00000573126 ARL6IP4Q66PJ3 421 aaKnown RBP12.68□□□□□ -0.38
RPAIN-212ENST00000573126 SPTY2D1Q68D10 685 aaPredicted RBP12.68□□□□□ -0.38
RPAIN-212ENST00000573126 WWC2Q6AWC2 1192 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 TMCO3Q6UWJ1 677 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 ZNF771Q7L3S4 317 aaPredicted RBP12.68□□□□□ -0.38
RPAIN-212ENST00000573126 CNGA4Q8IV77 575 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 MAPKAPK5Q8IW41 473 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 DISC1Q9NRI5 854 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 ARGLU1Q9NWB6 273 aaPredicted RBP12.68□□□□□ -0.38
RPAIN-212ENST00000573126 RWDD2AQ9UIY3 292 aa12.68□□□□□ -0.38
RPAIN-212ENST00000573126 GABPB1Q06547 395 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-212ENST00000573126 NAALADL2Q58DX5 795 aa12.67□□□□□ -0.38
RPAIN-212ENST00000573126 ZNF658Q5TYW1 1059 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-212ENST00000573126 ACRBPQ8NEB7 543 aa12.67□□□□□ -0.38
RPAIN-212ENST00000573126 C8orf37Q96NL8 207 aa12.67□□□□□ -0.38
RPAIN-212ENST00000573126 NUP88Q99567 741 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-212ENST00000573126 NAA15Q9BXJ9 866 aaKnown RBP12.67□□□□□ -0.38
RPAIN-212ENST00000573126 RTCBQ9Y3I0 505 aaKnown RBP12.67□□□□□ -0.38
RPAIN-212ENST00000573126 KCNJ18B7U540 433 aa12.67□□□□□ -0.38
RPAIN-212ENST00000573126 ABL1P00519 1130 aa12.67□□□□□ -0.38
RPAIN-212ENST00000573126 KCNJ12Q14500 433 aa12.67□□□□□ -0.38
RPAIN-212ENST00000573126 TCP11X2Q5H9J9 407 aa12.67□□□□□ -0.38
RPAIN-212ENST00000573126 DTHD1Q6ZMT9 781 aa12.67□□□□□ -0.38
RPAIN-212ENST00000573126 EEF2KMTQ96G04 330 aa12.67□□□□□ -0.38
RPAIN-212ENST00000573126 CCNL1Q9UK58 526 aaPredicted RBP12.67□□□□□ -0.38
RPAIN-212ENST00000573126 PCDHA6Q9UN73 950 aa12.67□□□□□ -0.38
RPAIN-212ENST00000573126 PCDHA8Q9Y5H6 950 aa12.67□□□□□ -0.38
RPAIN-212ENST00000573126 IRS2Q9Y4H2 1338 aa12.67□□□□□ -0.38
RPAIN-212ENST00000573126 GOLGB1Q14789 3259 aaKnown RBP12.66□□□□□ -0.38
RPAIN-212ENST00000573126 COPB1P53618 953 aaKnown RBP12.66□□□□□ -0.38
RPAIN-212ENST00000573126 GRM4Q14833 912 aa12.66□□□□□ -0.38
RPAIN-212ENST00000573126 ZNF444Q8N0Y2 327 aaPredicted RBP12.66□□□□□ -0.38
RPAIN-212ENST00000573126 PYM1Q9BRP8 204 aaKnown RBP12.66□□□□□ -0.38
RPAIN-212ENST00000573126 LIMA1Q9UHB6 759 aaKnown RBP12.66□□□□□ -0.38
RPAIN-212ENST00000573126 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
RPAIN-212ENST00000573126 LRRC10BA6NIK2 292 aa12.66□□□□□ -0.38
RPAIN-212ENST00000573126 PES1O00541 588 aaKnown RBP12.66□□□□□ -0.38
RPAIN-212ENST00000573126 KIF5CO60282 957 aa12.66□□□□□ -0.38
RPAIN-212ENST00000573126 ZRANB2O95218 330 aaKnown RBP eCLIP12.66□□□□□ -0.38
RPAIN-212ENST00000573126 TPM1P09493 284 aa12.66□□□□□ -0.38
RPAIN-212ENST00000573126 PMS1P54277 932 aaKnown RBP12.66□□□□□ -0.38
RPAIN-212ENST00000573126 ERVK-24P63145 666 aa12.66□□□□□ -0.38
RPAIN-212ENST00000573126 TERF2Q15554 542 aa12.66□□□□□ -0.38
RPAIN-212ENST00000573126 WDR66Q8TBY9 1149 aa12.66□□□□□ -0.38
RPAIN-212ENST00000573126 TMEM47Q9BQJ4 181 aa12.66□□□□□ -0.38
RPAIN-212ENST00000573126 ABHD10Q9NUJ1 306 aa12.66□□□□□ -0.38
RPAIN-212ENST00000573126 RMND1Q9NWS8 449 aa12.66□□□□□ -0.38
RPAIN-212ENST00000573126 CASZ1Q86V15 1759 aa12.65□□□□□ -0.38
RPAIN-212ENST00000573126 EP400Q96L91 3159 aa12.65□□□□□ -0.38
RPAIN-212ENST00000573126 M0R2N6 131 aa12.65□□□□□ -0.38
RPAIN-212ENST00000573126 TFRCP02786 760 aaKnown RBP12.65□□□□□ -0.38
RPAIN-212ENST00000573126 UBA7P41226 1012 aa12.65□□□□□ -0.38
RPAIN-212ENST00000573126 UBXN1Q04323 297 aa12.65□□□□□ -0.38
RPAIN-212ENST00000573126 ZNF569Q5MCW4 686 aa12.65□□□□□ -0.38
RPAIN-212ENST00000573126 AMOTL1Q8IY63 956 aa12.65□□□□□ -0.38
RPAIN-212ENST00000573126 SH3GLB2Q9NR46 395 aa12.65□□□□□ -0.38
RPAIN-212ENST00000573126 KIAA1551Q9HCM1 1747 aa12.65□□□□□ -0.38
RPAIN-212ENST00000573126 BAG3O95817 575 aa12.65□□□□□ -0.38
RPAIN-212ENST00000573126 RC3H1Q5TC82 1133 aaKnown RBP12.65□□□□□ -0.38
RPAIN-212ENST00000573126 ITIH6Q6UXX5 1313 aa12.65□□□□□ -0.38
RPAIN-212ENST00000573126 ANKRD20A12PQ8NF67 263 aa12.65□□□□□ -0.38
RPAIN-212ENST00000573126 LRRC15Q8TF66 581 aa12.65□□□□□ -0.38
RPAIN-212ENST00000573126 NGLY1Q96IV0 654 aa12.65□□□□□ -0.38
RPAIN-212ENST00000573126 BARHL2Q9NY43 387 aa12.65□□□□□ -0.38
RPAIN-212ENST00000573126 PUF60Q9UHX1 559 aaKnown RBP12.65□□□□□ -0.38
RPAIN-212ENST00000573126 STXBP3O00186 592 aa12.64□□□□□ -0.39
RPAIN-212ENST00000573126 RASA1P20936 1047 aa12.64□□□□□ -0.39
RPAIN-212ENST00000573126 KRT9P35527 623 aa12.64□□□□□ -0.39
RPAIN-212ENST00000573126 SPAG1Q07617 926 aa12.64□□□□□ -0.39
RPAIN-212ENST00000573126 RSRC2Q7L4I2 434 aaKnown RBP12.64□□□□□ -0.39
RPAIN-212ENST00000573126 IRF2BP1Q8IU81 584 aa12.64□□□□□ -0.39
RPAIN-212ENST00000573126 CCDC148Q8NFR7 591 aa12.64□□□□□ -0.39
RPAIN-212ENST00000573126 KLRF2D3W0D1 207 aa12.64□□□□□ -0.39
RPAIN-212ENST00000573126 PLA2G4AP47712 749 aa12.64□□□□□ -0.39
RPAIN-212ENST00000573126 GNAQP50148 359 aa12.64□□□□□ -0.39
RPAIN-212ENST00000573126 ADSSL1Q8N142 457 aa12.64□□□□□ -0.39
RPAIN-212ENST00000573126 GPR161Q8N6U8 529 aaKnown RBP12.64□□□□□ -0.39
RPAIN-212ENST00000573126 PARD6BQ9BYG5 372 aa12.64□□□□□ -0.39
RPAIN-212ENST00000573126 LAMB1P07942 1786 aa12.64□□□□□ -0.39
RPAIN-212ENST00000573126 KIF20AO95235 890 aa12.63□□□□□ -0.39
RPAIN-212ENST00000573126 PARP1P09874 1014 aaKnown RBP12.63□□□□□ -0.39
RPAIN-212ENST00000573126 RFC4P35249 363 aa12.63□□□□□ -0.39
RPAIN-212ENST00000573126 GRAPQ13588 217 aa12.63□□□□□ -0.39
RPAIN-212ENST00000573126 LETM2Q2VYF4 491 aa12.63□□□□□ -0.39
RPAIN-212ENST00000573126 GRAPLQ8TC17 118 aaPredicted RBP12.63□□□□□ -0.39
RPAIN-212ENST00000573126 ANKS1AQ92625 1134 aa12.63□□□□□ -0.39
RPAIN-212ENST00000573126 GOLGA1Q92805 767 aa12.63□□□□□ -0.39
RPAIN-212ENST00000573126 CCDC51Q96ER9 411 aa12.63□□□□□ -0.39
RPAIN-212ENST00000573126 SLF1Q9BQI6 1058 aa12.63□□□□□ -0.39
RPAIN-212ENST00000573126 PALM3A6NDB9 673 aaPredicted RBP12.63□□□□□ -0.39
RPAIN-212ENST00000573126 RGL2O15211 777 aa12.63□□□□□ -0.39
RPAIN-212ENST00000573126 SASH3O75995 380 aa12.63□□□□□ -0.39
RPAIN-212ENST00000573126 NAPAP54920 295 aa12.63□□□□□ -0.39
RPAIN-212ENST00000573126 KIF4BQ2VIQ3 1234 aa12.63□□□□□ -0.39
RPAIN-212ENST00000573126 CC2D1AQ6P1N0 951 aaPredicted RBP12.63□□□□□ -0.39
RPAIN-212ENST00000573126 USP17L2Q6R6M4 530 aa12.63□□□□□ -0.39
RPAIN-212ENST00000573126 SLC35F6Q8N357 371 aa12.63□□□□□ -0.39
RPAIN-212ENST00000573126 CHP1Q99653 195 aa12.63□□□□□ -0.39
RPAIN-212ENST00000573126 VAT1LQ9HCJ6 419 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms