RNA–Protein interactions for RNA: ENST00000572905.1

TOM1L1-215, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 3

Gene TOM1L1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-215ENST00000572905 LRRN2O75325 713 aa7.54□□□□□ -1.2
TOM1L1-215ENST00000572905 RAP1GAPP47736 663 aa7.54□□□□□ -1.2
TOM1L1-215ENST00000572905 IFRD2Q12894 506 aaPredicted RBP7.54□□□□□ -1.2
TOM1L1-215ENST00000572905 JAZF1Q86VZ6 243 aa7.54□□□□□ -1.2
TOM1L1-215ENST00000572905 KCNK12Q9HB15 430 aa7.54□□□□□ -1.2
TOM1L1-215ENST00000572905 ST7Q9NRC1 585 aa7.54□□□□□ -1.2
TOM1L1-215ENST00000572905 GPATCH2Q9NW75 528 aa7.54□□□□□ -1.2
TOM1L1-215ENST00000572905 KCNH3Q9ULD8 1083 aa7.54□□□□□ -1.2
TOM1L1-215ENST00000572905 TNFRSF10CO14798 259 aa7.53□□□□□ -1.2
TOM1L1-215ENST00000572905 PDPK1O15530 556 aa7.53□□□□□ -1.2
TOM1L1-215ENST00000572905 DNAJA2O60884 412 aa7.53□□□□□ -1.2
TOM1L1-215ENST00000572905 RAG1P15918 1043 aa7.53□□□□□ -1.2
TOM1L1-215ENST00000572905 LTKP29376 864 aa7.53□□□□□ -1.2
TOM1L1-215ENST00000572905 EGR3Q06889 387 aa7.53□□□□□ -1.2
TOM1L1-215ENST00000572905 RASGRF1Q13972 1273 aa7.53□□□□□ -1.2
TOM1L1-215ENST00000572905 GAB4Q2WGN9 574 aa7.53□□□□□ -1.2
TOM1L1-215ENST00000572905 ARSHQ5FYA8 562 aa7.53□□□□□ -1.2
TOM1L1-215ENST00000572905 SLFN12Q8IYM2 578 aa7.53□□□□□ -1.2
TOM1L1-215ENST00000572905 BHLHE22Q8NFJ8 381 aaPredicted RBP7.53□□□□□ -1.2
TOM1L1-215ENST00000572905 MYLIPQ8WY64 445 aa7.53□□□□□ -1.2
TOM1L1-215ENST00000572905 PPP1R16BQ96T49 567 aa7.53□□□□□ -1.2
TOM1L1-215ENST00000572905 PHAXQ9H814 394 aaKnown RBP7.53□□□□□ -1.2
TOM1L1-215ENST00000572905 CHURC1-FNTBB4DL54 471 aa7.52□□□□□ -1.21
TOM1L1-215ENST00000572905 DDAH1O94760 285 aa7.52□□□□□ -1.21
TOM1L1-215ENST00000572905 TRHRP34981 398 aaPredicted RBP7.52□□□□□ -1.21
TOM1L1-215ENST00000572905 CCNFP41002 786 aa7.52□□□□□ -1.21
TOM1L1-215ENST00000572905 NCAPHQ15003 741 aa7.52□□□□□ -1.21
TOM1L1-215ENST00000572905 TSPYL5Q86VY4 417 aaPredicted RBP7.52□□□□□ -1.21
TOM1L1-215ENST00000572905 PHACTR4Q8IZ21 702 aa7.52□□□□□ -1.21
TOM1L1-215ENST00000572905 BAHD1Q8TBE0 780 aaPredicted RBP7.52□□□□□ -1.21
TOM1L1-215ENST00000572905 RNF141Q8WVD5 230 aa7.52□□□□□ -1.21
TOM1L1-215ENST00000572905 GPR62Q9BZJ7 368 aa7.52□□□□□ -1.21
TOM1L1-215ENST00000572905 MRPL42Q9Y6G3 142 aaKnown RBP7.52□□□□□ -1.21
TOM1L1-215ENST00000572905 FAM221BA6H8Z2 402 aa7.51□□□□□ -1.21
TOM1L1-215ENST00000572905 GJB6O95452 261 aa7.51□□□□□ -1.21
TOM1L1-215ENST00000572905 TSPAN15O95858 294 aa7.51□□□□□ -1.21
TOM1L1-215ENST00000572905 ACRP10323 421 aa7.51□□□□□ -1.21
TOM1L1-215ENST00000572905 SRFP11831 508 aa7.51□□□□□ -1.21
TOM1L1-215ENST00000572905 SPOCD1Q6ZMY3 1216 aa7.51□□□□□ -1.21
TOM1L1-215ENST00000572905 UNC5AQ6ZN44 842 aa7.51□□□□□ -1.21
TOM1L1-215ENST00000572905 FAM178BQ8IXR5 827 aa7.51□□□□□ -1.21
TOM1L1-215ENST00000572905 NLGN1Q8N2Q7 840 aa7.51□□□□□ -1.21
TOM1L1-215ENST00000572905 FBXO15Q8NCQ5 510 aaPredicted RBP7.51□□□□□ -1.21
TOM1L1-215ENST00000572905 MICAL1Q8TDZ2 1067 aa7.51□□□□□ -1.21
TOM1L1-215ENST00000572905 KREMEN1Q96MU8 473 aa7.51□□□□□ -1.21
TOM1L1-215ENST00000572905 PUS7Q96PZ0 661 aaKnown RBP7.51□□□□□ -1.21
TOM1L1-215ENST00000572905 SLC9A7Q96T83 725 aa7.51□□□□□ -1.21
TOM1L1-215ENST00000572905 PCDHA11Q9Y5I1 949 aa7.51□□□□□ -1.21
TOM1L1-215ENST00000572905 HPXP02790 462 aa7.5□□□□□ -1.21
TOM1L1-215ENST00000572905 NCLP19338 710 aaKnown RBP7.5□□□□□ -1.21
TOM1L1-215ENST00000572905 LCE1DQ5T752 114 aa7.5□□□□□ -1.21
TOM1L1-215ENST00000572905 C6orf15Q6UXA7 325 aaPredicted RBP7.5□□□□□ -1.21
TOM1L1-215ENST00000572905 DHRS1Q96LJ7 313 aa7.5□□□□□ -1.21
TOM1L1-215ENST00000572905 CCDC74BQ96LY2 380 aa7.5□□□□□ -1.21
TOM1L1-215ENST00000572905 C19orf44Q9H6X5 657 aa7.5□□□□□ -1.21
TOM1L1-215ENST00000572905 DCP1AQ9NPI6 582 aaPredicted RBP7.5□□□□□ -1.21
TOM1L1-215ENST00000572905 CLSTN1O94985 981 aa7.49□□□□□ -1.21
TOM1L1-215ENST00000572905 HMGB1P09429 215 aaKnown RBP7.49□□□□□ -1.21
TOM1L1-215ENST00000572905 C1QTNF9P0C862 333 aa7.49□□□□□ -1.21
TOM1L1-215ENST00000572905 HSD3B2P26439 372 aa7.49□□□□□ -1.21
TOM1L1-215ENST00000572905 ZYXQ15942 572 aaKnown RBP7.49□□□□□ -1.21
TOM1L1-215ENST00000572905 BBS9Q3SYG4 887 aa7.49□□□□□ -1.21
TOM1L1-215ENST00000572905 MTERF2Q49AM1 385 aa7.49□□□□□ -1.21
TOM1L1-215ENST00000572905 VHLLQ6RSH7 139 aa7.49□□□□□ -1.21
TOM1L1-215ENST00000572905 EEPD1Q7L9B9 569 aa7.49□□□□□ -1.21
TOM1L1-215ENST00000572905 ST13P5Q8NFI4 369 aaPredicted RBP7.49□□□□□ -1.21
TOM1L1-215ENST00000572905 ZNF669Q96BR6 464 aaPredicted RBP7.49□□□□□ -1.21
TOM1L1-215ENST00000572905 TOX2Q96NM4 488 aa7.49□□□□□ -1.21
TOM1L1-215ENST00000572905 KIF2CQ99661 725 aa7.49□□□□□ -1.21
TOM1L1-215ENST00000572905 EPB41L4BQ9H329 900 aa7.49□□□□□ -1.21
TOM1L1-215ENST00000572905 SHISA3A0PJX4 238 aa7.48□□□□□ -1.21
TOM1L1-215ENST00000572905 B2RBV5 119 aa7.48□□□□□ -1.21
TOM1L1-215ENST00000572905 NFIBO00712 420 aa7.48□□□□□ -1.21
TOM1L1-215ENST00000572905 ENPP3O14638 875 aa7.48□□□□□ -1.21
TOM1L1-215ENST00000572905 RGS13O14921 159 aa7.48□□□□□ -1.21
TOM1L1-215ENST00000572905 ZGLP1P0C6A0 271 aa7.48□□□□□ -1.21
TOM1L1-215ENST00000572905 CFPP27918 469 aa7.48□□□□□ -1.21
TOM1L1-215ENST00000572905 GBP1P32455 592 aa7.48□□□□□ -1.21
TOM1L1-215ENST00000572905 CHMP4BP1P59074 171 aa7.48□□□□□ -1.21
TOM1L1-215ENST00000572905 ANKLE2Q86XL3 938 aa7.48□□□□□ -1.21
TOM1L1-215ENST00000572905 CILP2Q8IUL8 1156 aa7.48□□□□□ -1.21
TOM1L1-215ENST00000572905 RNPC3Q96LT9 517 aaKnown RBP7.48□□□□□ -1.21
TOM1L1-215ENST00000572905 DNAJC7Q99615 494 aa7.48□□□□□ -1.21
TOM1L1-215ENST00000572905 RNF32Q9H0A6 362 aa7.48□□□□□ -1.21
TOM1L1-215ENST00000572905 ANKRD62A6NC57 917 aa7.47□□□□□ -1.21
TOM1L1-215ENST00000572905 SLC7A5Q01650 507 aa7.47□□□□□ -1.21
TOM1L1-215ENST00000572905 TIGD5Q53EQ6 642 aa7.47□□□□□ -1.21
TOM1L1-215ENST00000572905 FBLN7Q53RD9 439 aa7.47□□□□□ -1.21
TOM1L1-215ENST00000572905 LRRC56Q8IYG6 542 aaPredicted RBP7.47□□□□□ -1.21
TOM1L1-215ENST00000572905 PDZD8Q8NEN9 1154 aa7.47□□□□□ -1.21
TOM1L1-215ENST00000572905 SYTL4Q96C24 671 aaPredicted RBP7.47□□□□□ -1.21
TOM1L1-215ENST00000572905 ASPNQ9BXN1 380 aa7.47□□□□□ -1.21
TOM1L1-215ENST00000572905 ZNF214Q9UL59 606 aaPredicted RBP7.47□□□□□ -1.21
TOM1L1-215ENST00000572905 LTBP3Q9NS15 1303 aa7.47□□□□□ -1.21
TOM1L1-215ENST00000572905 FAM86C2PA6NEL3 165 aa7.46□□□□□ -1.22
TOM1L1-215ENST00000572905 KRT1P04264 644 aa7.46□□□□□ -1.22
TOM1L1-215ENST00000572905 POLR2BP30876 1174 aaKnown RBP7.46□□□□□ -1.22
TOM1L1-215ENST00000572905 CLEC16AQ2KHT3 1053 aa7.46□□□□□ -1.22
TOM1L1-215ENST00000572905 EGFLAMQ63HQ2 1017 aa7.46□□□□□ -1.22
TOM1L1-215ENST00000572905 SH3TC2Q8TF17 1288 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms