RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 GTF3C3Q9Y5Q9 886 aa18.55■□□□□ 0.56
CHD3-215ENST00000572750 PTCH2Q9Y6C5 1203 aa18.55■□□□□ 0.56
CHD3-215ENST00000572750 VWA5AO00534 786 aa18.54■□□□□ 0.56
CHD3-215ENST00000572750 PDHBP11177 359 aa18.54■□□□□ 0.56
CHD3-215ENST00000572750 PRKCZQ05513 592 aa18.54■□□□□ 0.56
CHD3-215ENST00000572750 PLS1Q14651 629 aa18.54■□□□□ 0.56
CHD3-215ENST00000572750 ARHGEF6Q15052 776 aa18.54■□□□□ 0.56
CHD3-215ENST00000572750 MB21D1Q8N884 522 aa18.54■□□□□ 0.56
CHD3-215ENST00000572750 ANKS1AQ92625 1134 aa18.54■□□□□ 0.56
CHD3-215ENST00000572750 SENP2Q9HC62 589 aa18.54■□□□□ 0.56
CHD3-215ENST00000572750 FEM1BQ9UK73 627 aa18.54■□□□□ 0.56
CHD3-215ENST00000572750 EYSQ5T1H1 3165 aa18.54■□□□□ 0.56
CHD3-215ENST00000572750 IFIT3O14879 490 aaKnown RBP18.53■□□□□ 0.56
CHD3-215ENST00000572750 PRC1O43663 620 aa18.53■□□□□ 0.56
CHD3-215ENST00000572750 GNRH1P01148 92 aa18.53■□□□□ 0.56
CHD3-215ENST00000572750 HSPA4P34932 840 aa18.53■□□□□ 0.56
CHD3-215ENST00000572750 MNX1P50219 401 aaPredicted RBP18.53■□□□□ 0.56
CHD3-215ENST00000572750 TMEM132BQ14DG7 1078 aa18.53■□□□□ 0.56
CHD3-215ENST00000572750 ADCK5Q3MIX3 580 aa18.53■□□□□ 0.56
CHD3-215ENST00000572750 REPS2Q8NFH8 660 aa18.53■□□□□ 0.56
CHD3-215ENST00000572750 SPATC1LQ9H0A9 340 aa18.53■□□□□ 0.56
CHD3-215ENST00000572750 GPCPD1Q9NPB8 672 aa18.53■□□□□ 0.56
CHD3-215ENST00000572750 SRRDQ9UH36 339 aa18.53■□□□□ 0.56
CHD3-215ENST00000572750 GABRQQ9UN88 632 aa18.53■□□□□ 0.56
CHD3-215ENST00000572750 ADAMTS5Q9UNA0 930 aa18.53■□□□□ 0.56
CHD3-215ENST00000572750 ZNF236Q9UL36 1845 aa18.53■□□□□ 0.56
CHD3-215ENST00000572750 ERICH2A1L162 156 aa18.52■□□□□ 0.56
CHD3-215ENST00000572750 SNHG28P0DPA3 235 aa18.52■□□□□ 0.56
CHD3-215ENST00000572750 ZKSCAN1P17029 563 aaPredicted RBP18.52■□□□□ 0.56
CHD3-215ENST00000572750 MCM5P33992 734 aa18.52■□□□□ 0.56
CHD3-215ENST00000572750 CCNA1P78396 465 aa18.52■□□□□ 0.56
CHD3-215ENST00000572750 SART3Q15020 963 aaKnown RBP18.52■□□□□ 0.56
CHD3-215ENST00000572750 TMEM67Q5HYA8 995 aa18.52■□□□□ 0.56
CHD3-215ENST00000572750 WDR78Q5VTH9 848 aa18.52■□□□□ 0.56
CHD3-215ENST00000572750 TTBK2Q6IQ55 1244 aa18.52■□□□□ 0.56
CHD3-215ENST00000572750 CCAR1Q8IX12 1150 aaKnown RBP18.52■□□□□ 0.56
CHD3-215ENST00000572750 PRPF38AQ8NAV1 312 aaKnown RBP18.52■□□□□ 0.56
CHD3-215ENST00000572750 SHISA4Q96DD7 197 aa18.52■□□□□ 0.56
CHD3-215ENST00000572750 MOV10L1Q9BXT6 1211 aaKnown RBP18.52■□□□□ 0.56
CHD3-215ENST00000572750 CWC22Q9HCG8 908 aaKnown RBP18.52■□□□□ 0.56
CHD3-215ENST00000572750 GPHNQ9NQX3 736 aaPredicted RBP18.52■□□□□ 0.56
CHD3-215ENST00000572750 ZNF214Q9UL59 606 aaPredicted RBP18.52■□□□□ 0.56
CHD3-215ENST00000572750 GOLGA8HP0CJ92 632 aa18.51■□□□□ 0.55
CHD3-215ENST00000572750 MAPK4P31152 587 aa18.51■□□□□ 0.55
CHD3-215ENST00000572750 SLC16A2P36021 539 aa18.51■□□□□ 0.55
CHD3-215ENST00000572750 ZNF543Q08ER8 600 aa18.51■□□□□ 0.55
CHD3-215ENST00000572750 WTAPQ15007 396 aa18.51■□□□□ 0.55
CHD3-215ENST00000572750 GPR142Q7Z601 462 aa18.51■□□□□ 0.55
CHD3-215ENST00000572750 FAM160B2Q86V87 743 aa18.51■□□□□ 0.55
CHD3-215ENST00000572750 COA7Q96BR5 231 aa18.51■□□□□ 0.55
CHD3-215ENST00000572750 LRCH3Q96II8 777 aa18.51■□□□□ 0.55
CHD3-215ENST00000572750 LRRC2Q9BYS8 371 aa18.51■□□□□ 0.55
CHD3-215ENST00000572750 SNX14Q9Y5W7 946 aa18.51■□□□□ 0.55
CHD3-215ENST00000572750 FLT3LGP49771 235 aa18.5■□□□□ 0.55
CHD3-215ENST00000572750 SNAP25P60880 206 aa18.5■□□□□ 0.55
CHD3-215ENST00000572750 SLC9C1Q4G0N8 1177 aa18.5■□□□□ 0.55
CHD3-215ENST00000572750 CHURC1Q8WUH1 139 aa18.5■□□□□ 0.55
CHD3-215ENST00000572750 KCNB2Q92953 911 aa18.5■□□□□ 0.55
CHD3-215ENST00000572750 TCEANC2Q96MN5 208 aa18.5■□□□□ 0.55
CHD3-215ENST00000572750 NEK1Q96PY6 1258 aa18.5■□□□□ 0.55
CHD3-215ENST00000572750 LY9Q9HBG7 655 aa18.5■□□□□ 0.55
CHD3-215ENST00000572750 SLC38A10Q9HBR0 1119 aa18.5■□□□□ 0.55
CHD3-215ENST00000572750 PRR12Q9ULL5 1215 aa18.5■□□□□ 0.55
CHD3-215ENST00000572750 SH2B2O14492 632 aaPredicted RBP18.49■□□□□ 0.55
CHD3-215ENST00000572750 ERCC3P19447 782 aa18.49■□□□□ 0.55
CHD3-215ENST00000572750 HOXD10P28358 340 aa18.49■□□□□ 0.55
CHD3-215ENST00000572750 KRT32Q14532 448 aa18.49■□□□□ 0.55
CHD3-215ENST00000572750 TSGA10IPQ3SY00 556 aa18.49■□□□□ 0.55
CHD3-215ENST00000572750 SYDE2Q5VT97 1194 aa18.49■□□□□ 0.55
CHD3-215ENST00000572750 SNRNP48Q6IEG0 339 aaKnown RBP18.49■□□□□ 0.55
CHD3-215ENST00000572750 PLEKHH3Q7Z736 793 aa18.49■□□□□ 0.55
CHD3-215ENST00000572750 NCAPG2Q86XI2 1143 aa18.49■□□□□ 0.55
CHD3-215ENST00000572750 CPXCR1Q8N123 301 aa18.49■□□□□ 0.55
CHD3-215ENST00000572750 RAET1EQ8TD07 263 aa18.49■□□□□ 0.55
CHD3-215ENST00000572750 IGDCC4Q8TDY8 1250 aa18.49■□□□□ 0.55
CHD3-215ENST00000572750 SH3TC2Q8TF17 1288 aa18.49■□□□□ 0.55
CHD3-215ENST00000572750 TEX13BQ9BXU2 312 aa18.49■□□□□ 0.55
CHD3-215ENST00000572750 USP26Q9BXU7 913 aa18.49■□□□□ 0.55
CHD3-215ENST00000572750 CPVLQ9H3G5 476 aa18.49■□□□□ 0.55
CHD3-215ENST00000572750 CTDP1Q9Y5B0 961 aaPredicted RBP18.49■□□□□ 0.55
CHD3-215ENST00000572750 LAMA2P24043 3122 aaKnown RBP18.49■□□□□ 0.55
CHD3-215ENST00000572750 PLA2G6O60733 806 aa18.48■□□□□ 0.55
CHD3-215ENST00000572750 ZBED4O75132 1171 aa18.48■□□□□ 0.55
CHD3-215ENST00000572750 CPA1P15085 419 aa18.48■□□□□ 0.55
CHD3-215ENST00000572750 PRMT2P55345 433 aa18.48■□□□□ 0.55
CHD3-215ENST00000572750 SOCS4Q8WXH5 440 aa18.48■□□□□ 0.55
CHD3-215ENST00000572750 JAKMIP1Q96N16 626 aaKnown RBP18.48■□□□□ 0.55
CHD3-215ENST00000572750 RAVER2Q9HCJ3 691 aaKnown RBP18.48■□□□□ 0.55
CHD3-215ENST00000572750 MYH6P13533 1939 aa18.47■□□□□ 0.55
CHD3-215ENST00000572750 EPB41L2O43491 1005 aaKnown RBP18.47■□□□□ 0.55
CHD3-215ENST00000572750 PARP1P09874 1014 aaKnown RBP18.47■□□□□ 0.55
CHD3-215ENST00000572750 TAL1P17542 331 aaPredicted RBP18.47■□□□□ 0.55
CHD3-215ENST00000572750 STAT3P40763 770 aa18.47■□□□□ 0.55
CHD3-215ENST00000572750 SLC4A3P48751 1232 aa18.47■□□□□ 0.55
CHD3-215ENST00000572750 ASPRV1Q53RT3 343 aa18.47■□□□□ 0.55
CHD3-215ENST00000572750 GPATCH4Q5T3I0 446 aaKnown RBP18.47■□□□□ 0.55
CHD3-215ENST00000572750 CCDC174Q6PII3 467 aa18.47■□□□□ 0.55
CHD3-215ENST00000572750 BTNL9Q6UXG8 535 aa18.47■□□□□ 0.55
CHD3-215ENST00000572750 UBE2Q1Q7Z7E8 422 aa18.47■□□□□ 0.55
CHD3-215ENST00000572750 RIOX2Q8IUF8 465 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms