RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 ATP2B1P20020 1258 aa23.56■■□□□ 1.36
CHRNE-202ENST00000572438 SLC1A4P43007 532 aa23.56■■□□□ 1.36
CHRNE-202ENST00000572438 NAPAP54920 295 aa23.56■■□□□ 1.36
CHRNE-202ENST00000572438 CAMK4Q16566 473 aa23.56■■□□□ 1.36
CHRNE-202ENST00000572438 NOM1Q5C9Z4 860 aaKnown RBP23.56■■□□□ 1.36
CHRNE-202ENST00000572438 KCTD1Q719H9 257 aa23.56■■□□□ 1.36
CHRNE-202ENST00000572438 MORC2Q9Y6X9 1032 aaPredicted RBP23.56■■□□□ 1.36
CHRNE-202ENST00000572438 M0R2N6 131 aa23.55■■□□□ 1.36
CHRNE-202ENST00000572438 ADAMTS3O15072 1205 aa23.55■■□□□ 1.36
CHRNE-202ENST00000572438 CUTAO60888 179 aa23.55■■□□□ 1.36
CHRNE-202ENST00000572438 TRAPPC10P48553 1259 aa23.55■■□□□ 1.36
CHRNE-202ENST00000572438 KIF4BQ2VIQ3 1234 aa23.55■■□□□ 1.36
CHRNE-202ENST00000572438 TTBK2Q6IQ55 1244 aa23.55■■□□□ 1.36
CHRNE-202ENST00000572438 PIK3AP1Q6ZUJ8 805 aa23.55■■□□□ 1.36
CHRNE-202ENST00000572438 MIGA2Q7L4E1 593 aa23.55■■□□□ 1.36
CHRNE-202ENST00000572438 ADGRF4Q8IZF3 695 aa23.55■■□□□ 1.36
CHRNE-202ENST00000572438 KRI1Q8N9T8 703 aaKnown RBP23.55■■□□□ 1.36
CHRNE-202ENST00000572438 ZMYND12Q9H0C1 365 aa23.55■■□□□ 1.36
CHRNE-202ENST00000572438 RBSNQ9H1K0 784 aa23.55■■□□□ 1.36
CHRNE-202ENST00000572438 JMJD4Q9H9V9 463 aa23.55■■□□□ 1.36
CHRNE-202ENST00000572438 A0A1B0GVL5 298 aa23.54■■□□□ 1.36
CHRNE-202ENST00000572438 F5H6K3 240 aa23.54■■□□□ 1.36
CHRNE-202ENST00000572438 RAD21O60216 631 aa23.54■■□□□ 1.36
CHRNE-202ENST00000572438 KLRC3Q07444 240 aa23.54■■□□□ 1.36
CHRNE-202ENST00000572438 RBM43Q6ZSC3 357 aaKnown RBP23.54■■□□□ 1.36
CHRNE-202ENST00000572438 FMR1NBQ8N0W7 255 aaPredicted RBP23.54■■□□□ 1.36
CHRNE-202ENST00000572438 ZBTB21Q9ULJ3 1066 aa23.54■■□□□ 1.36
CHRNE-202ENST00000572438 H7C1D1 291 aa23.54■■□□□ 1.36
CHRNE-202ENST00000572438 KINO60870 393 aaKnown RBP23.54■■□□□ 1.36
CHRNE-202ENST00000572438 NDUFA8P51970 172 aa23.54■■□□□ 1.36
CHRNE-202ENST00000572438 GMCL1Q96IK5 515 aa23.54■■□□□ 1.36
CHRNE-202ENST00000572438 TEPSINQ96N21 525 aa23.54■■□□□ 1.36
CHRNE-202ENST00000572438 C6orf50Q9HD87 102 aa23.54■■□□□ 1.36
CHRNE-202ENST00000572438 PNMA6FA0A0J9YX94 578 aa23.53■■□□□ 1.36
CHRNE-202ENST00000572438 BMP15O95972 392 aa23.53■■□□□ 1.36
CHRNE-202ENST00000572438 TTC38Q5R3I4 469 aa23.53■■□□□ 1.36
CHRNE-202ENST00000572438 GPC2Q8N158 579 aa23.53■■□□□ 1.36
CHRNE-202ENST00000572438 FUCA2Q9BTY2 467 aa23.53■■□□□ 1.36
CHRNE-202ENST00000572438 HACL1Q9UJ83 578 aa23.53■■□□□ 1.36
CHRNE-202ENST00000572438 PCDHA6Q9UN73 950 aa23.53■■□□□ 1.36
CHRNE-202ENST00000572438 PCDHA8Q9Y5H6 950 aa23.53■■□□□ 1.36
CHRNE-202ENST00000572438 ESYT2A0FGR8 921 aa23.52■■□□□ 1.36
CHRNE-202ENST00000572438 NDUFB10O96000 172 aa23.52■■□□□ 1.36
CHRNE-202ENST00000572438 PTPREP23469 700 aa23.52■■□□□ 1.36
CHRNE-202ENST00000572438 GNA11P29992 359 aa23.52■■□□□ 1.36
CHRNE-202ENST00000572438 SLC16A2P36021 539 aa23.52■■□□□ 1.36
CHRNE-202ENST00000572438 SHC4Q6S5L8 630 aa23.52■■□□□ 1.36
CHRNE-202ENST00000572438 MTMR8Q96EF0 704 aa23.52■■□□□ 1.36
CHRNE-202ENST00000572438 ARHGEF10LQ9HCE6 1279 aa23.52■■□□□ 1.36
CHRNE-202ENST00000572438 FBXO2Q9UK22 296 aaPredicted RBP23.52■■□□□ 1.36
CHRNE-202ENST00000572438 ASTN2O75129 1339 aaPredicted RBP23.52■■□□□ 1.36
CHRNE-202ENST00000572438 A0A1W2PRG0 241 aa23.52■■□□□ 1.36
CHRNE-202ENST00000572438 SMCO2A6NFE2 343 aa23.52■■□□□ 1.36
CHRNE-202ENST00000572438 CTAGE5O15320 804 aa23.52■■□□□ 1.36
CHRNE-202ENST00000572438 PFKFB1P16118 471 aa23.52■■□□□ 1.36
CHRNE-202ENST00000572438 CAP2P40123 477 aa23.52■■□□□ 1.36
CHRNE-202ENST00000572438 RESP18Q5W5W9 173 aa23.52■■□□□ 1.36
CHRNE-202ENST00000572438 CLIC6Q96NY7 704 aa23.52■■□□□ 1.36
CHRNE-202ENST00000572438 SCAF8Q9UPN6 1271 aaKnown RBP23.52■■□□□ 1.36
CHRNE-202ENST00000572438 FAM237AA0A1B0GTK4 181 aa23.51■■□□□ 1.35
CHRNE-202ENST00000572438 CCDC194A0A1B0GVG4 234 aa23.51■■□□□ 1.35
CHRNE-202ENST00000572438 RASGRP4Q8TDF6 673 aa23.51■■□□□ 1.35
CHRNE-202ENST00000572438 GPRC5DQ9NZD1 345 aa23.51■■□□□ 1.35
CHRNE-202ENST00000572438 USP17L10C9JJH3 530 aa23.5■■□□□ 1.35
CHRNE-202ENST00000572438 WNT7AO00755 349 aa23.5■■□□□ 1.35
CHRNE-202ENST00000572438 ZBTB5O15062 677 aa23.5■■□□□ 1.35
CHRNE-202ENST00000572438 PPP1R18Q6NYC8 613 aa23.5■■□□□ 1.35
CHRNE-202ENST00000572438 CKAP2LQ8IYA6 745 aa23.5■■□□□ 1.35
CHRNE-202ENST00000572438 SRPRBQ9Y5M8 271 aaKnown RBP23.5■■□□□ 1.35
CHRNE-202ENST00000572438 CCDC192P0DO97 292 aa23.49■■□□□ 1.35
CHRNE-202ENST00000572438 ZNF174Q15697 407 aa23.49■■□□□ 1.35
CHRNE-202ENST00000572438 ZNF579Q8NAF0 562 aaKnown RBP23.49■■□□□ 1.35
CHRNE-202ENST00000572438 HPSEQ9Y251 543 aa23.49■■□□□ 1.35
CHRNE-202ENST00000572438 TMX2Q9Y320 296 aa23.49■■□□□ 1.35
CHRNE-202ENST00000572438 DICER1Q9UPY3 1922 aaKnown RBP23.49■■□□□ 1.35
CHRNE-202ENST00000572438 COA7Q96BR5 231 aa23.49■■□□□ 1.35
CHRNE-202ENST00000572438 DEFB129Q9H1M3 183 aa23.49■■□□□ 1.35
CHRNE-202ENST00000572438 UTRNP46939 3433 aa23.48■■□□□ 1.35
CHRNE-202ENST00000572438 PHF20L1A8MW92 1017 aa23.48■■□□□ 1.35
CHRNE-202ENST00000572438 PPP1R11O60927 126 aaPredicted RBP23.48■■□□□ 1.35
CHRNE-202ENST00000572438 BMP3P12645 472 aa23.48■■□□□ 1.35
CHRNE-202ENST00000572438 ECE1P42892 770 aa23.48■■□□□ 1.35
CHRNE-202ENST00000572438 KRT25Q7Z3Z0 450 aa23.48■■□□□ 1.35
CHRNE-202ENST00000572438 ACER1Q8TDN7 264 aa23.48■■□□□ 1.35
CHRNE-202ENST00000572438 PANK2Q9BZ23 570 aa23.48■■□□□ 1.35
CHRNE-202ENST00000572438 ZNF202O95125 648 aa23.47■■□□□ 1.35
CHRNE-202ENST00000572438 ASNSP08243 561 aa23.47■■□□□ 1.35
CHRNE-202ENST00000572438 NUP88Q99567 741 aaPredicted RBP23.47■■□□□ 1.35
CHRNE-202ENST00000572438 GOPCQ9HD26 462 aa23.47■■□□□ 1.35
CHRNE-202ENST00000572438 MRVI1Q9Y6F6 885 aa23.47■■□□□ 1.35
CHRNE-202ENST00000572438 ADCY7P51828 1080 aa23.47■■□□□ 1.35
CHRNE-202ENST00000572438 ATP2C1P98194 919 aaPredicted RBP23.47■■□□□ 1.35
CHRNE-202ENST00000572438 APOBEC3FQ8IUX4 373 aaKnown RBP23.47■■□□□ 1.35
CHRNE-202ENST00000572438 TRPM4Q8TD43 1214 aa23.47■■□□□ 1.35
CHRNE-202ENST00000572438 FERMT2Q96AC1 680 aa23.47■■□□□ 1.35
CHRNE-202ENST00000572438 SH2D4AQ9H788 454 aa23.47■■□□□ 1.35
CHRNE-202ENST00000572438 SYKP43405 635 aa23.46■■□□□ 1.35
CHRNE-202ENST00000572438 GRIN1Q05586 938 aa23.46■■□□□ 1.35
CHRNE-202ENST00000572438 REXO1Q8N1G1 1221 aaKnown RBP23.46■■□□□ 1.35
CHRNE-202ENST00000572438 RNF214Q8ND24 703 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms