RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 NOLC1Q14978 699 aaKnown RBP eCLIP10.11□□□□□ -0.79
TVP23A-205ENST00000572428 UNC5DQ6UXZ4 953 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 NEK10Q6ZWH5 1172 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 CDHR1Q96JP9 859 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 CAPS2Q9BXY5 557 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 RBSNQ9H1K0 784 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 TCEAL9Q9UHQ7 104 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 CDK5RAP2Q96SN8 1893 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 DICER1Q9UPY3 1922 aaKnown RBP10.11□□□□□ -0.79
TVP23A-205ENST00000572428 H0YIN7 160 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 HIP1O00291 1037 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 ATP2B4P23634 1241 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 U2AF2P26368 475 aaKnown RBP eCLIP10.11□□□□□ -0.79
TVP23A-205ENST00000572428 PDIA5Q14554 519 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 SMUG1Q53HV7 270 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 PODNQ7Z5L7 613 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 C2CD5Q86YS7 1000 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 TMEM151BQ8IW70 566 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 CCAR1Q8IX12 1150 aaKnown RBP10.11□□□□□ -0.79
TVP23A-205ENST00000572428 MTRQ99707 1265 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 RTFDC1Q9BY42 306 aaPredicted RBP10.11□□□□□ -0.79
TVP23A-205ENST00000572428 PHACTR1Q9C0D0 580 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 MAPK8IP1Q9UQF2 711 aa10.11□□□□□ -0.79
TVP23A-205ENST00000572428 C19orf81C9J6K1 198 aa10.1□□□□□ -0.79
TVP23A-205ENST00000572428 SGSM2O43147 1006 aa10.1□□□□□ -0.79
TVP23A-205ENST00000572428 ATG7O95352 703 aa10.1□□□□□ -0.79
TVP23A-205ENST00000572428 MCAMP43121 646 aa10.1□□□□□ -0.79
TVP23A-205ENST00000572428 PDCD2Q16342 344 aaPredicted RBP10.1□□□□□ -0.79
TVP23A-205ENST00000572428 SHROOM1Q2M3G4 852 aaPredicted RBP10.1□□□□□ -0.79
TVP23A-205ENST00000572428 EFCAB13Q8IY85 973 aa10.1□□□□□ -0.79
TVP23A-205ENST00000572428 ZNF483Q8TF39 744 aaPredicted RBP10.1□□□□□ -0.79
TVP23A-205ENST00000572428 TSC1Q92574 1164 aa10.1□□□□□ -0.79
TVP23A-205ENST00000572428 CNKSR1Q969H4 720 aa10.1□□□□□ -0.79
TVP23A-205ENST00000572428 BAG1Q99933 345 aaPredicted RBP10.1□□□□□ -0.79
TVP23A-205ENST00000572428 TRIM7Q9C029 511 aa10.1□□□□□ -0.79
TVP23A-205ENST00000572428 BOLA2Q9H3K6 86 aa10.1□□□□□ -0.79
TVP23A-205ENST00000572428 POLR3EQ9NVU0 708 aa10.1□□□□□ -0.79
TVP23A-205ENST00000572428 DCAF16Q9NXF7 216 aa10.1□□□□□ -0.79
TVP23A-205ENST00000572428 ZMAT5Q9UDW3 170 aaKnown RBP10.1□□□□□ -0.79
TVP23A-205ENST00000572428 TTF2Q9UNY4 1162 aaKnown RBP10.1□□□□□ -0.79
TVP23A-205ENST00000572428 PDE4BQ07343 736 aa10.1□□□□□ -0.79
TVP23A-205ENST00000572428 R3HDM1Q15032 1099 aaKnown RBP10.1□□□□□ -0.79
TVP23A-205ENST00000572428 TTC39AQ5SRH9 613 aa10.1□□□□□ -0.79
TVP23A-205ENST00000572428 LCA5Q86VQ0 697 aa10.1□□□□□ -0.79
TVP23A-205ENST00000572428 C10orf67Q8IYJ2 551 aa10.1□□□□□ -0.79
TVP23A-205ENST00000572428 KBTBD3Q8NAB2 608 aa10.1□□□□□ -0.79
TVP23A-205ENST00000572428 FAM84BQ96KN1 310 aaPredicted RBP10.1□□□□□ -0.79
TVP23A-205ENST00000572428 OGFRQ9NZT2 677 aa10.1□□□□□ -0.79
TVP23A-205ENST00000572428 CWC15Q9P013 229 aaKnown RBP10.1□□□□□ -0.79
TVP23A-205ENST00000572428 HSPA4P34932 840 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 PHKA1P46020 1223 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 SKOR2Q2VWA4 1001 aaPredicted RBP10.09□□□□□ -0.79
TVP23A-205ENST00000572428 LILRB1Q8NHL6 650 aaPredicted RBP10.09□□□□□ -0.79
TVP23A-205ENST00000572428 FAM161BQ96MY7 647 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 SH3GL3Q99963 347 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 PAG1Q9NWQ8 432 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 TMEM88BA6NKF7 163 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 CYP1A2P05177 515 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 USP4Q13107 963 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 SNX1Q13596 522 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 SCARF1Q14162 830 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 APPL2Q8NEU8 664 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 MRFAP1L1Q96HT8 127 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 BARX2Q9UMQ3 279 aaPredicted RBP10.09□□□□□ -0.79
TVP23A-205ENST00000572428 CD2APQ9Y5K6 639 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 SALL1Q9NSC2 1324 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 ECM29Q5VYK3 1845 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 EME2A4GXA9 379 aaPredicted RBP10.09□□□□□ -0.79
TVP23A-205ENST00000572428 TTLL12Q14166 644 aaPredicted RBP10.09□□□□□ -0.79
TVP23A-205ENST00000572428 TTF1Q15361 905 aaPredicted RBP10.09□□□□□ -0.79
TVP23A-205ENST00000572428 RASGRP2Q7LDG7 609 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 ARMC9Q7Z3E5 817 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 FLCNQ8NFG4 579 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 FRS2Q8WU20 508 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 PBXIP1Q96AQ6 731 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 MAP3K14Q99558 947 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 VRTNQ9H8Y1 702 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 ZNF446Q9NWS9 450 aa10.09□□□□□ -0.79
TVP23A-205ENST00000572428 B3GALNT1O75752 331 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 MRE11P49959 708 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 NEK4P51957 841 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 TRIM29Q14134 588 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 C14orf80Q86SX3 495 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 TBC1D16Q8TBP0 767 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 SH3TC2Q8TF17 1288 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 SH3KBP1Q96B97 665 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 TRPV5Q9NQA5 729 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 DIAPH3Q9NSV4 1193 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 HMG20BQ9P0W2 317 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 SCN9AQ15858 1988 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 SLC26A4O43511 780 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 IL1R1P14778 569 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 FECHP22830 423 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 KIAA0825Q8IV33 1275 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 SPC24Q8NBT2 197 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 ACAD8Q9UKU7 415 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 INTUQ9ULD6 942 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 WTIPA6NIX2 430 aaPredicted RBP10.08□□□□□ -0.8
TVP23A-205ENST00000572428 H0Y3Z8 333 aa10.08□□□□□ -0.8
TVP23A-205ENST00000572428 SNAP23O00161 211 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms