RNA–Protein interactions for RNA: ENST00000572158.5

TOM1L1-210, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TOM1L1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-210ENST00000572158 BTNL9Q6UXG8 535 aa11.33□□□□□ -0.6
TOM1L1-210ENST00000572158 SHISA4Q96DD7 197 aa11.33□□□□□ -0.6
TOM1L1-210ENST00000572158 PTPN18Q99952 460 aa11.33□□□□□ -0.6
TOM1L1-210ENST00000572158 RPAP3Q9H6T3 665 aaPredicted RBP11.33□□□□□ -0.6
TOM1L1-210ENST00000572158 RIOX1Q9H6W3 641 aa11.33□□□□□ -0.6
TOM1L1-210ENST00000572158 RBM28Q9NW13 759 aaKnown RBP11.33□□□□□ -0.6
TOM1L1-210ENST00000572158 ABT1Q9ULW3 272 aaKnown RBP11.33□□□□□ -0.6
TOM1L1-210ENST00000572158 CNTNAP5Q8WYK1 1306 aa11.33□□□□□ -0.6
TOM1L1-210ENST00000572158 PARP14Q460N5 1801 aa11.33□□□□□ -0.6
TOM1L1-210ENST00000572158 PTPDC1A2A3K4 754 aa11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 WDR46O15213 610 aaKnown RBP11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 KIF5BP33176 963 aa11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 SNAP25P60880 206 aa11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 SNAPC2Q13487 334 aa11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 PKN1Q16512 942 aa11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 GPATCH4Q5T3I0 446 aaKnown RBP11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 CATSPERGQ6ZRH7 1159 aa11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 ADGRF4Q8IZF3 695 aa11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 BRI3BPQ8WY22 251 aa11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 MTMR8Q96EF0 704 aa11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 INTS4Q96HW7 963 aaKnown RBP11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 HHIPL1Q96JK4 782 aa11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 IPO9Q96P70 1041 aaKnown RBP11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 LLPHQ9BRT6 129 aaKnown RBP11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 SPZ1Q9BXG8 430 aa11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 JMJD4Q9H9V9 463 aa11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 CREBZFQ9NS37 354 aa11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 V9GY48 417 aaPredicted RBP11.32□□□□□ -0.6
TOM1L1-210ENST00000572158 CCDC196A0A1B0GTZ2 297 aa11.31□□□□□ -0.6
TOM1L1-210ENST00000572158 RASSF10A6NK89 507 aa11.31□□□□□ -0.6
TOM1L1-210ENST00000572158 PLA2G6O60733 806 aa11.31□□□□□ -0.6
TOM1L1-210ENST00000572158 FMNL1O95466 1100 aaPredicted RBP11.31□□□□□ -0.6
TOM1L1-210ENST00000572158 SMARCA1P28370 1054 aa11.31□□□□□ -0.6
TOM1L1-210ENST00000572158 GADL1Q6ZQY3 521 aa11.31□□□□□ -0.6
TOM1L1-210ENST00000572158 PROCA1Q8NCQ7 364 aaPredicted RBP11.31□□□□□ -0.6
TOM1L1-210ENST00000572158 DDX11Q96FC9 970 aa11.31□□□□□ -0.6
TOM1L1-210ENST00000572158 AIFM3Q96NN9 605 aa11.31□□□□□ -0.6
TOM1L1-210ENST00000572158 VAT1LQ9HCJ6 419 aa11.31□□□□□ -0.6
TOM1L1-210ENST00000572158 TMOD4Q9NZQ9 345 aa11.31□□□□□ -0.6
TOM1L1-210ENST00000572158 PRR12Q9ULL5 1215 aa11.31□□□□□ -0.6
TOM1L1-210ENST00000572158 CCL15-CCL14A0A0B4J2E2 113 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 TESPA1A2RU30 521 aaPredicted RBP11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 CPLX1O14810 134 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 PRPF3O43395 683 aaKnown RBP11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 DHX16O60231 1041 aaKnown RBP11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 PPP1R11O60927 126 aaPredicted RBP11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 GJB2P29033 226 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 HOXA7P31268 230 aaPredicted RBP11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 DDIT3P35638 169 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 GNAQP50148 359 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 STAT2P52630 851 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 GTF2A2P52657 109 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 CCL15Q16663 113 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 CYP4F22Q6NT55 531 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 PIBF1Q8WXW3 757 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 PIGSQ96S52 555 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 LZTS2Q9BRK4 669 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 SLC26A6Q9BXS9 759 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 TANGO6Q9C0B7 1094 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 GJB4Q9NTQ9 266 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 FEM1BQ9UK73 627 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 ADAMTS5Q9UNA0 930 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 AGTPBP1Q9UPW5 1226 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 FARP1Q9Y4F1 1045 aaPredicted RBP11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 USP17L15C9J2P7 530 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 BTBD19C9JJ37 291 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 USP17L13C9JLJ4 530 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 USP17L11C9JVI0 530 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 USP17L18D6R9N7 530 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 USP17L22D6RA61 530 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 USP17L17D6RBQ6 530 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 USP17L19D6RCP7 530 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 USP17L20D6RJB6 530 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 PEX10O60683 326 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 FLOT1O75955 427 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 CETPP11597 493 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 USP17L24Q0WX57 530 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 SYDE2Q5VT97 1194 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 FASTKD5Q7L8L6 764 aaKnown RBP11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 FAM43AQ8N2R8 423 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 KIFC2Q96AC6 838 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 ATG4CQ96DT6 458 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 P2RX7Q99572 595 aaKnown RBP11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 SLF1Q9BQI6 1058 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 RNF26Q9BY78 433 aaPredicted RBP11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 ORC3Q9UBD5 711 aaPredicted RBP11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 PPP1R9AQ9ULJ8 1098 aa11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 ISY1Q9ULR0 285 aaKnown RBP11.3□□□□□ -0.6
TOM1L1-210ENST00000572158 SMCHD1A6NHR9 2005 aa11.29□□□□□ -0.6
TOM1L1-210ENST00000572158 ZNF536O15090 1300 aa11.29□□□□□ -0.6
TOM1L1-210ENST00000572158 STK36Q9NRP7 1315 aa11.29□□□□□ -0.6
TOM1L1-210ENST00000572158 C19orf67A6NJJ6 358 aa11.29□□□□□ -0.6
TOM1L1-210ENST00000572158 IGF2BP3O00425 579 aaKnown RBP eCLIP11.29□□□□□ -0.6
TOM1L1-210ENST00000572158 TAL1P17542 331 aaPredicted RBP11.29□□□□□ -0.6
TOM1L1-210ENST00000572158 SSRP1Q08945 709 aaKnown RBP11.29□□□□□ -0.6
TOM1L1-210ENST00000572158 COG2Q14746 738 aa11.29□□□□□ -0.6
TOM1L1-210ENST00000572158 QRICH1Q2TAL8 776 aa11.29□□□□□ -0.6
TOM1L1-210ENST00000572158 DEFB115Q30KQ5 88 aa11.29□□□□□ -0.6
TOM1L1-210ENST00000572158 TYW1BQ6NUM6 668 aa11.29□□□□□ -0.6
TOM1L1-210ENST00000572158 PRPF38AQ8NAV1 312 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms