RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 CACNA1FO60840 1977 aa18.23■□□□□ 0.51
RAB40B-206ENST00000571995 RAD17O75943 681 aa18.23■□□□□ 0.51
RAB40B-206ENST00000571995 SLFN14P0C7P3 912 aa18.23■□□□□ 0.51
RAB40B-206ENST00000571995 TAL1P17542 331 aaPredicted RBP18.23■□□□□ 0.51
RAB40B-206ENST00000571995 NONOQ15233 471 aaKnown RBP eCLIP18.23■□□□□ 0.51
RAB40B-206ENST00000571995 RBM43Q6ZSC3 357 aaKnown RBP18.23■□□□□ 0.51
RAB40B-206ENST00000571995 CABP7Q86V35 215 aa18.23■□□□□ 0.51
RAB40B-206ENST00000571995 SNX29Q8TEQ0 813 aa18.23■□□□□ 0.51
RAB40B-206ENST00000571995 JADE2Q9NQC1 790 aa18.23■□□□□ 0.51
RAB40B-206ENST00000571995 BMP6P22004 513 aa18.23■□□□□ 0.51
RAB40B-206ENST00000571995 ETF1P62495 437 aaKnown RBP18.23■□□□□ 0.51
RAB40B-206ENST00000571995 TBC1D8BQ0IIM8 1120 aa18.23■□□□□ 0.51
RAB40B-206ENST00000571995 SARM1Q6SZW1 724 aa18.23■□□□□ 0.51
RAB40B-206ENST00000571995 TBCKQ8TEA7 893 aa18.23■□□□□ 0.51
RAB40B-206ENST00000571995 GJD4Q96KN9 370 aaPredicted RBP18.23■□□□□ 0.51
RAB40B-206ENST00000571995 JCADQ9P266 1359 aa18.22■□□□□ 0.51
RAB40B-206ENST00000571995 TTBK2Q6IQ55 1244 aa18.22■□□□□ 0.51
RAB40B-206ENST00000571995 THRAP3Q9Y2W1 955 aaKnown RBP18.22■□□□□ 0.51
RAB40B-206ENST00000571995 PNPLA7Q6ZV29 1317 aa18.22■□□□□ 0.51
RAB40B-206ENST00000571995 GNA11P29992 359 aa18.22■□□□□ 0.51
RAB40B-206ENST00000571995 MORC3Q14149 939 aa18.22■□□□□ 0.51
RAB40B-206ENST00000571995 CCDC174Q6PII3 467 aa18.22■□□□□ 0.51
RAB40B-206ENST00000571995 TMEM60Q9H2L4 133 aa18.22■□□□□ 0.51
RAB40B-206ENST00000571995 ST7Q9NRC1 585 aa18.22■□□□□ 0.51
RAB40B-206ENST00000571995 TFRCP02786 760 aaKnown RBP18.22■□□□□ 0.51
RAB40B-206ENST00000571995 CHRNA5P30532 468 aa18.22■□□□□ 0.51
RAB40B-206ENST00000571995 NCAPHQ15003 741 aa18.22■□□□□ 0.51
RAB40B-206ENST00000571995 SF3B3Q15393 1217 aaKnown RBP18.22■□□□□ 0.51
RAB40B-206ENST00000571995 MIGA2Q7L4E1 593 aa18.22■□□□□ 0.51
RAB40B-206ENST00000571995 CCDC102AQ96A19 550 aa18.22■□□□□ 0.51
RAB40B-206ENST00000571995 AKR1B10O60218 316 aa18.21■□□□□ 0.51
RAB40B-206ENST00000571995 RPN1P04843 607 aaKnown RBP18.21■□□□□ 0.51
RAB40B-206ENST00000571995 VSTM4Q8IW00 320 aa18.21■□□□□ 0.51
RAB40B-206ENST00000571995 FERMT2Q96AC1 680 aa18.21■□□□□ 0.51
RAB40B-206ENST00000571995 BRIP1Q9BX63 1249 aa18.21■□□□□ 0.51
RAB40B-206ENST00000571995 NLRC4Q9NPP4 1024 aa18.21■□□□□ 0.51
RAB40B-206ENST00000571995 IMPACTQ9P2X3 320 aa18.21■□□□□ 0.51
RAB40B-206ENST00000571995 KIF2AO00139 706 aaPredicted RBP18.21■□□□□ 0.51
RAB40B-206ENST00000571995 CFBP00751 764 aa18.21■□□□□ 0.51
RAB40B-206ENST00000571995 CD44P16070 742 aaKnown RBP18.21■□□□□ 0.51
RAB40B-206ENST00000571995 KRT79Q5XKE5 535 aa18.21■□□□□ 0.51
RAB40B-206ENST00000571995 DCCP43146 1447 aa18.21■□□□□ 0.51
RAB40B-206ENST00000571995 POTEMA6NI47 508 aa18.21■□□□□ 0.5
RAB40B-206ENST00000571995 KCNJ18B7U540 433 aa18.21■□□□□ 0.5
RAB40B-206ENST00000571995 KCNJ12Q14500 433 aa18.21■□□□□ 0.5
RAB40B-206ENST00000571995 PKN1Q16512 942 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 B4DLN1 442 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 USP17L15C9J2P7 530 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 USP17L13C9JLJ4 530 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 USP17L11C9JVI0 530 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 USP17L18D6R9N7 530 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 USP17L22D6RA61 530 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 USP17L17D6RBQ6 530 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 USP17L19D6RCP7 530 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 USP17L20D6RJB6 530 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 MEIS1O00470 390 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 PPEF1O14829 653 aaPredicted RBP18.2■□□□□ 0.5
RAB40B-206ENST00000571995 ARHGAP6O43182 974 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 BMP15O95972 392 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 USP17L24Q0WX57 530 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 USP17L6PQ6QN14 398 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 KRT27Q7Z3Y8 459 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 FBXO33Q7Z6M2 555 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 TRAF5O00463 557 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 SEC23AQ15436 765 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 CALCRLQ16602 461 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 FBXO38Q6PIJ6 1188 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 ZNF384Q8TF68 577 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 ZNF512BQ96KM6 892 aaPredicted RBP18.2■□□□□ 0.5
RAB40B-206ENST00000571995 WDR24Q96S15 920 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 KCNQ5Q9NR82 932 aa18.2■□□□□ 0.5
RAB40B-206ENST00000571995 LUC7L2Q9Y383 392 aaKnown RBP18.2■□□□□ 0.5
RAB40B-206ENST00000571995 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.2■□□□□ 0.5
RAB40B-206ENST00000571995 LRRC37A3O60309 1634 aa18.19■□□□□ 0.5
RAB40B-206ENST00000571995 DDAH1O94760 285 aa18.19■□□□□ 0.5
RAB40B-206ENST00000571995 TERF1P54274 439 aa18.19■□□□□ 0.5
RAB40B-206ENST00000571995 CHMP4BP1P59074 171 aa18.19■□□□□ 0.5
RAB40B-206ENST00000571995 CCDC84Q86UT8 332 aaPredicted RBP18.19■□□□□ 0.5
RAB40B-206ENST00000571995 FAM205AQ6ZU69 1335 aa18.19■□□□□ 0.5
RAB40B-206ENST00000571995 IKBKBO14920 756 aa18.19■□□□□ 0.5
RAB40B-206ENST00000571995 PLCG2P16885 1265 aa18.19■□□□□ 0.5
RAB40B-206ENST00000571995 PPP2R3AQ06190 1150 aa18.19■□□□□ 0.5
RAB40B-206ENST00000571995 SF3B2Q13435 895 aaKnown RBP18.19■□□□□ 0.5
RAB40B-206ENST00000571995 SPATA1Q5VX52 437 aa18.19■□□□□ 0.5
RAB40B-206ENST00000571995 TIGD1Q96MW7 591 aa18.19■□□□□ 0.5
RAB40B-206ENST00000571995 A0A0U1RQJ8 604 aa18.19■□□□□ 0.5
RAB40B-206ENST00000571995 PLCG1P19174 1290 aa18.19■□□□□ 0.5
RAB40B-206ENST00000571995 HOXA13P31271 388 aaPredicted RBP18.19■□□□□ 0.5
RAB40B-206ENST00000571995 C2CD5Q86YS7 1000 aa18.19■□□□□ 0.5
RAB40B-206ENST00000571995 ATRIPQ8WXE1 791 aa18.19■□□□□ 0.5
RAB40B-206ENST00000571995 NOC4LQ9BVI4 516 aaKnown RBP18.19■□□□□ 0.5
RAB40B-206ENST00000571995 CENPHQ9H3R5 247 aa18.19■□□□□ 0.5
RAB40B-206ENST00000571995 ZMYND10O75800 440 aa18.18■□□□□ 0.5
RAB40B-206ENST00000571995 AKR1B1P15121 316 aa18.18■□□□□ 0.5
RAB40B-206ENST00000571995 GTF2F1P35269 517 aaKnown RBP eCLIP18.18■□□□□ 0.5
RAB40B-206ENST00000571995 USP8P40818 1118 aa18.18■□□□□ 0.5
RAB40B-206ENST00000571995 CYP27A1Q02318 531 aa18.18■□□□□ 0.5
RAB40B-206ENST00000571995 NCAPH2Q6IBW4 605 aa18.18■□□□□ 0.5
RAB40B-206ENST00000571995 ERO1AQ96HE7 468 aa18.18■□□□□ 0.5
RAB40B-206ENST00000571995 CDC25BP30305 580 aa18.18■□□□□ 0.5
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