RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 ANKRD2Q9GZV1 360 aa12.37□□□□□ -0.43
PCDHGA4-201ENST00000571252 SAP30BPQ9UHR5 308 aaKnown RBP12.37□□□□□ -0.43
PCDHGA4-201ENST00000571252 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.37□□□□□ -0.43
PCDHGA4-201ENST00000571252 RGPD1P0DJD0 1748 aa12.37□□□□□ -0.43
PCDHGA4-201ENST00000571252 F8W031 263 aaPredicted RBP12.37□□□□□ -0.43
PCDHGA4-201ENST00000571252 CETN3O15182 167 aa12.37□□□□□ -0.43
PCDHGA4-201ENST00000571252 VWA3BQ502W6 1294 aa12.37□□□□□ -0.43
PCDHGA4-201ENST00000571252 EPC1Q9H2F5 836 aa12.37□□□□□ -0.43
PCDHGA4-201ENST00000571252 ADAM21Q9UKJ8 722 aa12.37□□□□□ -0.43
PCDHGA4-201ENST00000571252 ZMYND10O75800 440 aa12.37□□□□□ -0.43
PCDHGA4-201ENST00000571252 KIF4AO95239 1232 aa12.37□□□□□ -0.43
PCDHGA4-201ENST00000571252 PLCG2P16885 1265 aa12.37□□□□□ -0.43
PCDHGA4-201ENST00000571252 TCP1P17987 556 aaKnown RBP12.37□□□□□ -0.43
PCDHGA4-201ENST00000571252 CCDC91Q7Z6B0 441 aa12.37□□□□□ -0.43
PCDHGA4-201ENST00000571252 EPSTI1Q96J88 318 aa12.37□□□□□ -0.43
PCDHGA4-201ENST00000571252 FUCA2Q9BTY2 467 aa12.37□□□□□ -0.43
PCDHGA4-201ENST00000571252 KLHL30Q0D2K2 578 aa12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 INF2Q27J81 1249 aa12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 HERC4Q5GLZ8 1057 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 TOGARAM2Q6ZUX3 1019 aa12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 TSKSQ9UJT2 592 aa12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 RTCBQ9Y3I0 505 aaKnown RBP12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 HYOU1Q9Y4L1 999 aa12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 UTYO14607 1347 aa12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 PTPREP23469 700 aa12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 MRPL12P52815 198 aaKnown RBP12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 USPL1Q5W0Q7 1092 aa12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 ZNF804AQ7Z570 1209 aa12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 ANKRD13CQ8N6S4 541 aa12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 EHMT1Q9H9B1 1298 aa12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 TFCP2L1Q9NZI6 479 aa12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 RPL13P26373 211 aaKnown RBP12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 CASP8Q14790 479 aa12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 ASIC2Q16515 512 aa12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 RUFY4Q6ZNE9 571 aa12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 ABCB6Q9NP58 842 aa12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 NWD1Q149M9 1564 aa12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 RFX7Q2KHR2 1363 aa12.36□□□□□ -0.43
PCDHGA4-201ENST00000571252 PRKAB2O43741 272 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 ARHGAP25P42331 645 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 IQCDQ96DY2 449 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 CABS1Q96KC9 395 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 TUBGCP2Q9BSJ2 902 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 CAPS2Q9BXY5 557 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 ZC3H12CQ9C0D7 883 aaKnown RBP12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 STMN4Q9H169 189 aaPredicted RBP12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 NALCNQ8IZF0 1738 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 RNF40O75150 1001 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 GYG1P46976 350 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 RPS6KA1Q15418 735 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 CCDC25Q86WR0 208 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 TEX11Q8IYF3 940 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 TRIM31Q9BZY9 425 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 MTRF1LQ9UGC7 380 aaKnown RBP12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 ASAP1Q9ULH1 1129 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 SAMM50Q9Y512 469 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 HEG1Q9ULI3 1381 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 TMEM110-MUSTN1A8MSY1 372 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 AP5Z1O43299 807 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 LONP1P36776 959 aaKnown RBP12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 LIG3P49916 1009 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 EXOSC10Q01780 885 aaKnown RBP12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 SFMBT2Q5VUG0 894 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 NYXQ9GZU5 481 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 BTG4Q9NY30 223 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 CDC25AP30304 524 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 RFX5P48382 616 aaPredicted RBP12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 ATP1A2P50993 1020 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 GUCY2FP51841 1108 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 ST3GAL1Q11201 340 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 HOOK3Q86VS8 718 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 NELFCDQ8IXH7 590 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 MB21D2Q8IYB1 491 aaPredicted RBP12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 GPCPD1Q9NPB8 672 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 HDAC9Q9UKV0 1011 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 MAP3K15Q6ZN16 1313 aa12.35□□□□□ -0.43
PCDHGA4-201ENST00000571252 SPDYE3A6NKU9 549 aa12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 CCT5P48643 541 aa12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 GPKOWQ92917 476 aaPredicted RBP eCLIP12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 TBC1D7Q9P0N9 293 aa12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 SAMD15Q9P1V8 674 aa12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 A0A1W2PRG0 241 aa12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 B4DLN1 442 aa12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 MFAP3LO75121 409 aa12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 FAM13AO94988 1023 aa12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 REXO1Q8N1G1 1221 aaKnown RBP12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 PNMA1Q8ND90 353 aa12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 DPF2Q92785 391 aa12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 ST7Q9NRC1 585 aa12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 CALCRLQ16602 461 aa12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 SYNE4Q8N205 404 aa12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 PAIP2Q9BPZ3 127 aaKnown RBP12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 PIH1D3Q9NQM4 214 aaKnown RBP12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 KDM6AO15550 1401 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 NDUFA10O95299 355 aa12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 EEF1GP26641 437 aaKnown RBP12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 TRAF1Q13077 416 aa12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 RABL6Q3YEC7 729 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA4-201ENST00000571252 NCAPH2Q6IBW4 605 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms