RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 CYBAP13498 195 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 CAPN2P17655 700 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 MCCP23508 829 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 SLC4A3P48751 1232 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 SNAP25P60880 206 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 ZNF792Q3KQV3 632 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 PRAMEF19Q5SWL8 479 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 AKNAD1Q5T1N1 836 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 TTC22Q5TAA0 569 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 SNRNP48Q6IEG0 339 aaKnown RBP6.4□□□□□ -1.38
CHD3-212ENST00000570758 KCTD1Q719H9 257 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 NECAB2Q7Z6G3 386 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 ANKLE1Q8NAG6 615 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 PRPF38AQ8NAV1 312 aaKnown RBP6.4□□□□□ -1.38
CHD3-212ENST00000570758 STAG1Q8WVM7 1258 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 DPF3Q92784 378 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 MAML3Q96JK9 1138 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 TMEM47Q9BQJ4 181 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 HTATIP2Q9BUP3 242 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 TEX13BQ9BXU2 312 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 SLC38A10Q9HBR0 1119 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 RAVER2Q9HCJ3 691 aaKnown RBP6.4□□□□□ -1.38
CHD3-212ENST00000570758 TOMM22Q9NS69 142 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 ISY1Q9ULR0 285 aaKnown RBP6.4□□□□□ -1.38
CHD3-212ENST00000570758 STX8Q9UNK0 236 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 MTMR7Q9Y216 660 aa6.4□□□□□ -1.38
CHD3-212ENST00000570758 BRCA2P51587 3418 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 DNAJC25-GNG10A0A024R161 153 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 ZNF213O14771 459 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 ATP2A1O14983 1001 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 TAL1P17542 331 aaPredicted RBP6.39□□□□□ -1.39
CHD3-212ENST00000570758 CNGA1P29973 690 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 COPB2P35606 906 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 SLC1A4P43007 532 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 STAT2P52630 851 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 MFAP1P55081 439 aaKnown RBP6.39□□□□□ -1.39
CHD3-212ENST00000570758 KCTD2Q14681 263 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 PPP4R3BQ5MIZ7 849 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 ANO1Q5XXA6 986 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 TTBK2Q6IQ55 1244 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 RCSD1Q6JBY9 416 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 FAM160B2Q86V87 743 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 DSCC1Q9BVC3 393 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 C11orf49Q9H6J7 331 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 TCP11L1Q9NUJ3 509 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 DDX20Q9UHI6 824 aaKnown RBP6.39□□□□□ -1.39
CHD3-212ENST00000570758 COLQQ9Y215 455 aaPredicted RBP6.39□□□□□ -1.39
CHD3-212ENST00000570758 PFASO15067 1338 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 ZNF536O15090 1300 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 NEDD4P46934 1319 aa6.39□□□□□ -1.39
CHD3-212ENST00000570758 FRMPD2Q68DX3 1309 aaPredicted RBP6.39□□□□□ -1.39
CHD3-212ENST00000570758 ALPK3Q96L96 1907 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 PLA2G6O60733 806 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 TOP1P11387 765 aaKnown RBP6.38□□□□□ -1.39
CHD3-212ENST00000570758 PCP11498 1178 aaKnown RBP6.38□□□□□ -1.39
CHD3-212ENST00000570758 COL6A1P12109 1028 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 CHMLP26374 656 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 SLC16A2P36021 539 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 OAZ1P54368 228 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 PTH1RQ03431 593 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 IKQ13123 557 aaPredicted RBP6.38□□□□□ -1.39
CHD3-212ENST00000570758 CCDC96Q2M329 555 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 CCDC174Q6PII3 467 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 MFSD6Q6ZSS7 791 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.38□□□□□ -1.39
CHD3-212ENST00000570758 SKAP1Q86WV1 359 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 C7orf61Q8IZ16 206 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 CHURC1Q8WUH1 139 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 DCAF4Q8WV16 495 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 DDX11Q96FC9 970 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 FGD4Q96M96 766 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 AGBL1Q96MI9 1066 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 ZKSCAN3Q9BRR0 538 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 GPCPD1Q9NPB8 672 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 HOMER2Q9NSB8 354 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 SLC5A4Q9NY91 659 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 PCDH10Q9P2E7 1040 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 PRR12Q9ULL5 1215 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 DIS3Q9Y2L1 958 aaKnown RBP6.38□□□□□ -1.39
CHD3-212ENST00000570758 CTDP1Q9Y5B0 961 aaPredicted RBP6.38□□□□□ -1.39
CHD3-212ENST00000570758 LAMA4Q16363 1823 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 FRMPD3Q5JV73 1810 aa6.38□□□□□ -1.39
CHD3-212ENST00000570758 ZNFX1Q9P2E3 1918 aaKnown RBP6.38□□□□□ -1.39
CHD3-212ENST00000570758 B4E1Z4 1266 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 SEPT4O43236 478 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 EVI5O60447 810 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 MSCO60682 206 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 KDM4AO75164 1064 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 SLC34A2O95436 690 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 SNAI1O95863 264 aaPredicted RBP6.37□□□□□ -1.39
CHD3-212ENST00000570758 ZNF865P0CJ78 1059 aaPredicted RBP6.37□□□□□ -1.39
CHD3-212ENST00000570758 FDX1P10109 184 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 PDHBP11177 359 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 CNTN2Q02246 1040 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 LRRC26Q2I0M4 334 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 MUM1L1Q5H9M0 696 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 HABP4Q5JVS0 413 aaKnown RBP6.37□□□□□ -1.39
CHD3-212ENST00000570758 GJC2Q5T442 439 aaPredicted RBP6.37□□□□□ -1.39
CHD3-212ENST00000570758 SYDE2Q5VT97 1194 aa6.37□□□□□ -1.39
CHD3-212ENST00000570758 BTNL9Q6UXG8 535 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms