RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 RXRAP19793 462 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 SLC1A4P43007 532 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 GNAQP50148 359 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 HUNKP57058 714 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 AKAP17AQ02040 695 aaKnown RBP7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 FSTL1Q12841 308 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 MTMR2Q13614 643 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 COL9A3Q14050 684 aaPredicted RBP7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 RRP1BQ14684 758 aaKnown RBP7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 PPP2R5BQ15173 497 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 MAP3K11Q16584 847 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 SHROOM1Q2M3G4 852 aaPredicted RBP7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 ASPRV1Q53RT3 343 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 RCSD1Q6JBY9 416 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 PADI6Q6TGC4 694 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 CCDC84Q86UT8 332 aaPredicted RBP7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 ERO1BQ86YB8 467 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 CCDC83Q8IWF9 413 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 TRIM22Q8IYM9 498 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 KRI1Q8N9T8 703 aaKnown RBP7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 GMCL1P1Q8NEA9 526 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 ANKS1AQ92625 1134 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 LPAR1Q92633 364 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 GTF3C6Q969F1 213 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 TSKSQ9UJT2 592 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 ABT1Q9ULW3 272 aaKnown RBP7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 SNCAIPQ9Y6H5 919 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 ZHX2Q9Y6X8 837 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 NID2Q14112 1375 aa7.66□□□□□ -1.18
CTDNEP1-204ENST00000570484 SPDYE5A6NIY4 337 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 UBE2Q2LH0YL09 131 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 PFKFB2O60825 505 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 LARGE1O95461 756 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 PDIA3P30101 505 aaKnown RBP7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 GUCY1A2P33402 732 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 ECE1P42892 770 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 PSEN2P49810 448 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 EVCP57679 992 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 CCT2P78371 535 aaKnown RBP7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 HMGN5P82970 282 aaKnown RBP7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 PPATQ06203 517 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 PPIL2Q13356 520 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 DOCK1Q14185 1865 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 AMHR2Q16671 573 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 ME3Q16798 604 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 GPATCH4Q5T3I0 446 aaKnown RBP7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 SLFN13Q68D06 897 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 USP17L2Q6R6M4 530 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 MOB2Q70IA6 237 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 FAM184AQ8NB25 1140 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 ZNF280CQ8ND82 737 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 NKX2-3Q8TAU0 364 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 DCAF4Q8WV16 495 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 CCDC102AQ96A19 550 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 OPTNQ96CV9 577 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 SLC10A4Q96EP9 437 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 IPO9Q96P70 1041 aaKnown RBP7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 KCNK17Q96T54 332 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 LZTS2Q9BRK4 669 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 TANGO6Q9C0B7 1094 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 KIAA1683Q9H0B3 1180 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 VCPKMTQ9H867 229 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 SENP2Q9HC62 589 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 NCOA5Q9HCD5 579 aaKnown RBP7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 SEC63Q9UGP8 760 aaKnown RBP7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 BRPF3Q9ULD4 1205 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 SMC3Q9UQE7 1217 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 TMX2Q9Y320 296 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 ADGRG1Q9Y653 693 aa7.65□□□□□ -1.18
CTDNEP1-204ENST00000570484 FRMPD2Q68DX3 1309 aaPredicted RBP7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 PASKQ96RG2 1323 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 PTPDC1A2A3K4 754 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 C19orf81C9J6K1 198 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 WDR46O15213 610 aaKnown RBP7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 ITGBL1O95965 494 aaPredicted RBP7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 NDUFB10O96000 172 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 OATP04181 439 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 PDHBP11177 359 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 BMP3P12645 472 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 NOVP48745 357 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 STAT2P52630 851 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 HMGCS2P54868 508 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 BACE1P56817 501 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 JAG1P78504 1218 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 FMR1Q06787 632 aaKnown RBP eCLIP7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 SCRN1Q12765 414 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 TROAPQ12815 778 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 SPP2Q13103 211 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 GRM4Q14833 912 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 SPICE1Q8N0Z3 855 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 NECAB1Q8N987 351 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 FANCBQ8NB91 859 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 ACER1Q8TDN7 264 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 WASF1Q92558 559 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 GMCL1Q96IK5 515 aa7.64□□□□□ -1.19
CTDNEP1-204ENST00000570484 CLMNQ96JQ2 1002 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms