RNA–Protein interactions for RNA: ENST00000570115.5

SIN3A-214, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-214ENST00000570115 CNPY2Q9Y2B0 182 aa13.23□□□□□ -0.29
SIN3A-214ENST00000570115 SYNGAP1Q96PV0 1343 aa13.22□□□□□ -0.29
SIN3A-214ENST00000570115 DNAJC25-GNG10A0A024R161 153 aa13.22□□□□□ -0.29
SIN3A-214ENST00000570115 IGKV6D-41A0A0C4DH26 115 aa13.22□□□□□ -0.29
SIN3A-214ENST00000570115 A0A1W2PQ45 241 aaPredicted RBP13.22□□□□□ -0.29
SIN3A-214ENST00000570115 A0A1W2PQY0 241 aa13.22□□□□□ -0.29
SIN3A-214ENST00000570115 MINDY4BA8MYZ0 360 aa13.22□□□□□ -0.29
SIN3A-214ENST00000570115 RNF113AO15541 343 aaKnown RBP13.22□□□□□ -0.29
SIN3A-214ENST00000570115 ADAMTS4O75173 837 aa13.22□□□□□ -0.29
SIN3A-214ENST00000570115 ZFYP08048 801 aaPredicted RBP13.22□□□□□ -0.29
SIN3A-214ENST00000570115 GNAT2P19087 354 aa13.22□□□□□ -0.29
SIN3A-214ENST00000570115 ZNF697Q5TEC3 545 aa13.22□□□□□ -0.29
SIN3A-214ENST00000570115 SNRNP48Q6IEG0 339 aaKnown RBP13.22□□□□□ -0.29
SIN3A-214ENST00000570115 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.22□□□□□ -0.295e-6■■■■■ 45.5
SIN3A-214ENST00000570115 MKL1Q969V6 931 aa13.22□□□□□ -0.29
SIN3A-214ENST00000570115 GPATCH3Q96I76 525 aa13.22□□□□□ -0.29
SIN3A-214ENST00000570115 FAM161BQ96MY7 647 aa13.22□□□□□ -0.29
SIN3A-214ENST00000570115 TSEN34Q9BSV6 310 aaKnown RBP13.22□□□□□ -0.29
SIN3A-214ENST00000570115 DCTPP1Q9H773 170 aa13.22□□□□□ -0.29
SIN3A-214ENST00000570115 ZNF287Q9HBT7 754 aa13.22□□□□□ -0.29
SIN3A-214ENST00000570115 CLIP2Q9UDT6 1046 aa13.22□□□□□ -0.29
SIN3A-214ENST00000570115 SYNPO2Q9UMS6 1093 aa13.22□□□□□ -0.29
SIN3A-214ENST00000570115 RIPK3Q9Y572 518 aa13.22□□□□□ -0.29
SIN3A-214ENST00000570115 MYH4Q9Y623 1939 aa13.21□□□□□ -0.29
SIN3A-214ENST00000570115 PRUNE2Q8WUY3 3088 aa13.21□□□□□ -0.29
SIN3A-214ENST00000570115 KIAA0355O15063 1070 aa13.21□□□□□ -0.29
SIN3A-214ENST00000570115 GPAA1O43292 621 aa13.21□□□□□ -0.29
SIN3A-214ENST00000570115 SNAI1O95863 264 aaPredicted RBP13.21□□□□□ -0.29
SIN3A-214ENST00000570115 CLTBP09497 229 aa13.21□□□□□ -0.29
SIN3A-214ENST00000570115 ITGB8P26012 769 aa13.21□□□□□ -0.29
SIN3A-214ENST00000570115 SMAD3P84022 425 aaKnown RBP13.21□□□□□ -0.29
SIN3A-214ENST00000570115 ANKRD33Q7Z3H0 272 aa13.21□□□□□ -0.29
SIN3A-214ENST00000570115 ZNF467Q7Z7K2 595 aaPredicted RBP13.21□□□□□ -0.29
SIN3A-214ENST00000570115 ZNF444Q8N0Y2 327 aaPredicted RBP13.21□□□□□ -0.29
SIN3A-214ENST00000570115 STK11IPQ8N1F8 1099 aa13.21□□□□□ -0.29
SIN3A-214ENST00000570115 DDX11Q96FC9 970 aa13.21□□□□□ -0.29
SIN3A-214ENST00000570115 EPB41L4AQ9HCS5 686 aaPredicted RBP13.21□□□□□ -0.29
SIN3A-214ENST00000570115 MTMR4Q9NYA4 1195 aa13.21□□□□□ -0.29
SIN3A-214ENST00000570115 FAM184BQ9ULE4 1060 aa13.21□□□□□ -0.29
SIN3A-214ENST00000570115 MOXD2PA6NHM9 499 aa13.2□□□□□ -0.3
SIN3A-214ENST00000570115 PATL2C9JE40 543 aaKnown RBP13.2□□□□□ -0.3
SIN3A-214ENST00000570115 ZBED4O75132 1171 aa13.2□□□□□ -0.3
SIN3A-214ENST00000570115 TDO2P48775 406 aa13.2□□□□□ -0.3
SIN3A-214ENST00000570115 TSHZ3Q63HK5 1081 aa13.2□□□□□ -0.3
SIN3A-214ENST00000570115 CCSAPQ6IQ19 270 aaPredicted RBP13.2□□□□□ -0.3
SIN3A-214ENST00000570115 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.2□□□□□ -0.34e-6■■■■■ 36.3
SIN3A-214ENST00000570115 GMCL1P1Q8NEA9 526 aa13.2□□□□□ -0.3
SIN3A-214ENST00000570115 KLHDC9Q8NEP7 349 aa13.2□□□□□ -0.3
SIN3A-214ENST00000570115 LENG1Q96BZ8 264 aaPredicted RBP13.2□□□□□ -0.3
SIN3A-214ENST00000570115 CEP95Q96GE4 821 aa13.2□□□□□ -0.3
SIN3A-214ENST00000570115 TOX2Q96NM4 488 aa13.2□□□□□ -0.3
SIN3A-214ENST00000570115 SEMA6BQ9H3T3 888 aa13.2□□□□□ -0.3
SIN3A-214ENST00000570115 SLC38A10Q9HBR0 1119 aa13.2□□□□□ -0.3
SIN3A-214ENST00000570115 FEM1BQ9UK73 627 aa13.2□□□□□ -0.3
SIN3A-214ENST00000570115 SYNRGQ9UMZ2 1314 aa13.19□□□□□ -0.3
SIN3A-214ENST00000570115 M0R2C6 588 aa13.19□□□□□ -0.3
SIN3A-214ENST00000570115 PQBP1O60828 265 aaKnown RBP13.19□□□□□ -0.3
SIN3A-214ENST00000570115 DUSP11O75319 330 aaKnown RBP13.19□□□□□ -0.3
SIN3A-214ENST00000570115 PRDM1O75626 825 aa13.19□□□□□ -0.3
SIN3A-214ENST00000570115 TTLL1O95922 423 aa13.19□□□□□ -0.3
SIN3A-214ENST00000570115 APPP05067 770 aa13.19□□□□□ -0.3
SIN3A-214ENST00000570115 ACLYP53396 1101 aa13.19□□□□□ -0.3
SIN3A-214ENST00000570115 OAZ1P54368 228 aa13.19□□□□□ -0.3
SIN3A-214ENST00000570115 LRRFIP1Q32MZ4 808 aaKnown RBP13.19□□□□□ -0.3
SIN3A-214ENST00000570115 IFNL3Q8IZI9 196 aa13.19□□□□□ -0.3
SIN3A-214ENST00000570115 CPXCR1Q8N123 301 aa13.19□□□□□ -0.3
SIN3A-214ENST00000570115 CHST13Q8NET6 341 aa13.19□□□□□ -0.3
SIN3A-214ENST00000570115 NUP133Q8WUM0 1156 aa13.19□□□□□ -0.3
SIN3A-214ENST00000570115 KIFC2Q96AC6 838 aa13.19□□□□□ -0.3
SIN3A-214ENST00000570115 CDX2Q99626 313 aaPredicted RBP13.19□□□□□ -0.3
SIN3A-214ENST00000570115 PLIN4Q96Q06 1357 aa13.19□□□□□ -0.3
SIN3A-214ENST00000570115 RAG1P15918 1043 aa13.18□□□□□ -0.3
SIN3A-214ENST00000570115 CST5P28325 142 aaPredicted RBP13.18□□□□□ -0.3
SIN3A-214ENST00000570115 EPHB4P54760 987 aa13.18□□□□□ -0.3
SIN3A-214ENST00000570115 FAAP100Q0VG06 881 aa13.18□□□□□ -0.3
SIN3A-214ENST00000570115 ACVR2BQ13705 512 aa13.18□□□□□ -0.3
SIN3A-214ENST00000570115 KCNA10Q16322 511 aa13.18□□□□□ -0.3
SIN3A-214ENST00000570115 NEDD1Q8NHV4 660 aa13.18□□□□□ -0.3
SIN3A-214ENST00000570115 TTYH1Q9H313 450 aaPredicted RBP13.18□□□□□ -0.3
SIN3A-214ENST00000570115 ABHD16BQ9H3Z7 469 aa13.18□□□□□ -0.3
SIN3A-214ENST00000570115 RAVER2Q9HCJ3 691 aaKnown RBP13.18□□□□□ -0.3
SIN3A-214ENST00000570115 STARD7Q9NQZ5 370 aa13.18□□□□□ -0.3
SIN3A-214ENST00000570115 TMEM39AQ9NV64 488 aa13.18□□□□□ -0.3
SIN3A-214ENST00000570115 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.18□□□□□ -0.3
SIN3A-214ENST00000570115 FBXO40Q9UH90 709 aa13.18□□□□□ -0.3
SIN3A-214ENST00000570115 CTDP1Q9Y5B0 961 aaPredicted RBP13.18□□□□□ -0.3
SIN3A-214ENST00000570115 MCM3APO60318 1980 aa13.18□□□□□ -0.3
SIN3A-214ENST00000570115 ELP1O95163 1332 aa13.17□□□□□ -0.3
SIN3A-214ENST00000570115 TTC41PQ6P2S7 1318 aa13.17□□□□□ -0.3
SIN3A-214ENST00000570115 DCDC2CA8MYV0 355 aa13.17□□□□□ -0.3
SIN3A-214ENST00000570115 FDX1P10109 184 aa13.17□□□□□ -0.3
SIN3A-214ENST00000570115 SLC4A3P48751 1232 aa13.17□□□□□ -0.3
SIN3A-214ENST00000570115 FPGSQ05932 587 aa13.17□□□□□ -0.3
SIN3A-214ENST00000570115 LRRC47Q8N1G4 583 aaKnown RBP13.17□□□□□ -0.3
SIN3A-214ENST00000570115 ANKRD35Q8N283 1001 aa13.17□□□□□ -0.3
SIN3A-214ENST00000570115 RNPC3Q96LT9 517 aaKnown RBP13.17□□□□□ -0.3
SIN3A-214ENST00000570115 FGD4Q96M96 766 aa13.17□□□□□ -0.3
SIN3A-214ENST00000570115 COL25A1Q9BXS0 654 aaPredicted RBP13.17□□□□□ -0.3
SIN3A-214ENST00000570115 NACAP1Q9BZK3 213 aa13.17□□□□□ -0.3
SIN3A-214ENST00000570115 ZHX1Q9UKY1 873 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms