RNA–Protein interactions for RNA: ENST00000570086.5

CMC2-222, Transcript of C-X9-C motif containing 2, human

TSL 3

Gene CMC2, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-222	ENST00000570086	TMEM88B	A6NKF7	163 aa		18.23	■□□□□ 0.51
CMC2-222	ENST00000570086	GJA5	P36382	358 aa		18.23	■□□□□ 0.51
CMC2-222	ENST00000570086	IK	Q13123	557 aa	Predicted RBP	18.23	■□□□□ 0.51
CMC2-222	ENST00000570086	SLC35G1	Q2M3R5	365 aa		18.23	■□□□□ 0.51
CMC2-222	ENST00000570086	SYDE2	Q5VT97	1194 aa		18.23	■□□□□ 0.51
CMC2-222	ENST00000570086	FASTKD5	Q7L8L6	764 aa	Known RBP	18.23	■□□□□ 0.51
CMC2-222	ENST00000570086	ADGRF4	Q8IZF3	695 aa		18.23	■□□□□ 0.51
CMC2-222	ENST00000570086	MTMR8	Q96EF0	704 aa		18.23	■□□□□ 0.51
CMC2-222	ENST00000570086	RPAP3	Q9H6T3	665 aa	Predicted RBP	18.23	■□□□□ 0.51
CMC2-222	ENST00000570086		V9GY48	417 aa	Predicted RBP	18.23	■□□□□ 0.51
CMC2-222	ENST00000570086	GTF2A2	P52657	109 aa		18.22	■□□□□ 0.51
CMC2-222	ENST00000570086	SPRYD7	Q5W111	196 aa		18.22	■□□□□ 0.51
CMC2-222	ENST00000570086	RGMB	Q6NW40	437 aa		18.22	■□□□□ 0.51
CMC2-222	ENST00000570086	TANGO6	Q9C0B7	1094 aa		18.22	■□□□□ 0.51
CMC2-222	ENST00000570086	CPVL	Q9H3G5	476 aa		18.22	■□□□□ 0.51
CMC2-222	ENST00000570086	JMJD4	Q9H9V9	463 aa		18.22	■□□□□ 0.51
CMC2-222	ENST00000570086	SEC63	Q9UGP8	760 aa	Known RBP	18.22	■□□□□ 0.51
CMC2-222	ENST00000570086	MYPN	Q86TC9	1320 aa		18.22	■□□□□ 0.51
CMC2-222	ENST00000570086	USP17L15	C9J2P7	530 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	USP17L13	C9JLJ4	530 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	USP17L11	C9JVI0	530 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	USP17L18	D6R9N7	530 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	USP17L22	D6RA61	530 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	USP17L17	D6RBQ6	530 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	USP17L19	D6RCP7	530 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	USP17L20	D6RJB6	530 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	hCG_1984214	I3L0E3	225 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	PPFIA3	O75145	1194 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	FDX1	P10109	184 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	SCG2	P13521	617 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	SLC16A2	P36021	539 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	USP17L24	Q0WX57	530 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	DGKZ	Q13574	1117 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	PKN1	Q16512	942 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	PFKFB3	Q16875	520 aa	Predicted RBP	18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	LARP1B	Q659C4	914 aa	Known RBP	18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	FAM177A1	Q8N128	213 aa	Predicted RBP	18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	ZNF713	Q8N859	430 aa	Predicted RBP	18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	PRPF38A	Q8NAV1	312 aa	Known RBP	18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	SLF1	Q9BQI6	1058 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	ALG1	Q9BT22	464 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	PRR12	Q9ULL5	1215 aa		18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	COL11A1	P12107	1806 aa	Predicted RBP	18.21	■□□□□ 0.51
CMC2-222	ENST00000570086	PNMA6F	A0A0J9YX94	578 aa		18.2	■□□□□ 0.5
CMC2-222	ENST00000570086	ZBTB5	O15062	677 aa		18.2	■□□□□ 0.5
CMC2-222	ENST00000570086	CETP	P11597	493 aa		18.2	■□□□□ 0.5
CMC2-222	ENST00000570086	XBP1	P17861	261 aa		18.2	■□□□□ 0.5
CMC2-222	ENST00000570086	HOXA7	P31268	230 aa	Predicted RBP	18.2	■□□□□ 0.5
CMC2-222	ENST00000570086	ZNF157	P51786	506 aa	Predicted RBP	18.2	■□□□□ 0.5
CMC2-222	ENST00000570086	PABPC4	Q13310	644 aa	Known RBP eCLIP	18.2	■□□□□ 0.5	1e-9	■■■□□ 15
CMC2-222	ENST00000570086	GADL1	Q6ZQY3	521 aa		18.2	■□□□□ 0.5
CMC2-222	ENST00000570086	CATSPERG	Q6ZRH7	1159 aa		18.2	■□□□□ 0.5
CMC2-222	ENST00000570086	RASAL3	Q86YV0	1011 aa		18.2	■□□□□ 0.5
CMC2-222	ENST00000570086	PIGS	Q96S52	555 aa		18.2	■□□□□ 0.5
CMC2-222	ENST00000570086	VAT1L	Q9HCJ6	419 aa		18.2	■□□□□ 0.5
CMC2-222	ENST00000570086	AGTPBP1	Q9UPW5	1226 aa		18.2	■□□□□ 0.5
CMC2-222	ENST00000570086	DTNB	O60941	627 aa		18.19	■□□□□ 0.5
CMC2-222	ENST00000570086	FLOT1	O75955	427 aa		18.19	■□□□□ 0.5
CMC2-222	ENST00000570086	SYT1	P21579	422 aa		18.19	■□□□□ 0.5
CMC2-222	ENST00000570086	TRAF1	Q13077	416 aa		18.19	■□□□□ 0.5
CMC2-222	ENST00000570086	MOGS	Q13724	837 aa		18.19	■□□□□ 0.5
CMC2-222	ENST00000570086	CCDC102A	Q96A19	550 aa		18.19	■□□□□ 0.5
CMC2-222	ENST00000570086	MS4A4A	Q96JQ5	239 aa		18.19	■□□□□ 0.5
CMC2-222	ENST00000570086	C8orf76	Q96K31	380 aa		18.19	■□□□□ 0.5
CMC2-222	ENST00000570086	RANBP17	Q9H2T7	1088 aa	Known RBP	18.19	■□□□□ 0.5
CMC2-222	ENST00000570086	SH3GLB2	Q9NR46	395 aa		18.19	■□□□□ 0.5
CMC2-222	ENST00000570086	FBXO28	Q9NVF7	368 aa		18.19	■□□□□ 0.5
CMC2-222	ENST00000570086	PPP1R9A	Q9ULJ8	1098 aa		18.19	■□□□□ 0.5
CMC2-222	ENST00000570086	ABT1	Q9ULW3	272 aa	Known RBP	18.19	■□□□□ 0.5
CMC2-222	ENST00000570086		A0A0G2JMZ2	1700 aa		18.18	■□□□□ 0.5
CMC2-222	ENST00000570086	STX6	O43752	255 aa		18.18	■□□□□ 0.5
CMC2-222	ENST00000570086	SLC10A3	P09131	477 aa		18.18	■□□□□ 0.5
CMC2-222	ENST00000570086	NUCB2	P80303	420 aa		18.18	■□□□□ 0.5
CMC2-222	ENST00000570086	TRIM29	Q14134	588 aa		18.18	■□□□□ 0.5
CMC2-222	ENST00000570086	COG2	Q14746	738 aa		18.18	■□□□□ 0.5
CMC2-222	ENST00000570086	CDC37	Q16543	378 aa	Predicted RBP	18.18	■□□□□ 0.5
CMC2-222	ENST00000570086	HOMER1	Q86YM7	354 aa		18.18	■□□□□ 0.5
CMC2-222	ENST00000570086	KIFC2	Q96AC6	838 aa		18.18	■□□□□ 0.5
CMC2-222	ENST00000570086	CHMP5	Q9NZZ3	219 aa		18.18	■□□□□ 0.5
CMC2-222	ENST00000570086	PNMA2	Q9UL42	364 aa		18.18	■□□□□ 0.5
CMC2-222	ENST00000570086	SLC45A1	Q9Y2W3	748 aa		18.18	■□□□□ 0.5
CMC2-222	ENST00000570086	hCG_1642624	A0A1W2PR95	340 aa		18.17	■□□□□ 0.5
CMC2-222	ENST00000570086	DSG3	P32926	999 aa		18.17	■□□□□ 0.5
CMC2-222	ENST00000570086	APLP1	P51693	650 aa		18.17	■□□□□ 0.5
CMC2-222	ENST00000570086	QRICH1	Q2TAL8	776 aa		18.17	■□□□□ 0.5
CMC2-222	ENST00000570086	TREML2	Q5T2D2	321 aa		18.17	■□□□□ 0.5
CMC2-222	ENST00000570086	FBXO18	Q8NFZ0	1043 aa		18.17	■□□□□ 0.5
CMC2-222	ENST00000570086	CCDC12	Q8WUD4	166 aa	Predicted RBP	18.17	■□□□□ 0.5
CMC2-222	ENST00000570086	PIBF1	Q8WXW3	757 aa		18.17	■□□□□ 0.5
CMC2-222	ENST00000570086	AIFM3	Q96NN9	605 aa		18.17	■□□□□ 0.5
CMC2-222	ENST00000570086	CREBZF	Q9NS37	354 aa		18.17	■□□□□ 0.5
CMC2-222	ENST00000570086	BARHL2	Q9NY43	387 aa		18.17	■□□□□ 0.5
CMC2-222	ENST00000570086	HOXC10	Q9NYD6	342 aa		18.17	■□□□□ 0.5
CMC2-222	ENST00000570086	CCL15-CCL14	A0A0B4J2E2	113 aa		18.16	■□□□□ 0.5
CMC2-222	ENST00000570086	TESPA1	A2RU30	521 aa	Predicted RBP	18.16	■□□□□ 0.5
CMC2-222	ENST00000570086	MANSC4	A6NHS7	340 aa	Predicted RBP	18.16	■□□□□ 0.5
CMC2-222	ENST00000570086		H3BQV1	296 aa		18.16	■□□□□ 0.5
CMC2-222	ENST00000570086	CCL15	Q16663	113 aa		18.16	■□□□□ 0.5
CMC2-222	ENST00000570086	IFFO2	Q5TF58	517 aa		18.16	■□□□□ 0.5
CMC2-222	ENST00000570086	WWC2	Q6AWC2	1192 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms