RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 RASA1P20936 1047 aa14.49□□□□□ -0.09
CAPN3-220ENST00000569827 UBE3CQ15386 1083 aa14.49□□□□□ -0.09
CAPN3-220ENST00000569827 SNRNP48Q6IEG0 339 aaKnown RBP14.49□□□□□ -0.09
CAPN3-220ENST00000569827 RNF180Q86T96 592 aa14.49□□□□□ -0.09
CAPN3-220ENST00000569827 SLF1Q9BQI6 1058 aa14.49□□□□□ -0.09
CAPN3-220ENST00000569827 TMEM39AQ9NV64 488 aa14.49□□□□□ -0.09
CAPN3-220ENST00000569827 ZHX1Q9UKY1 873 aaPredicted RBP14.49□□□□□ -0.09
CAPN3-220ENST00000569827 CHD9Q3L8U1 2897 aa14.49□□□□□ -0.09
CAPN3-220ENST00000569827 SCN5AQ14524 2016 aa14.48□□□□□ -0.09
CAPN3-220ENST00000569827 TCF20Q9UGU0 1960 aaKnown RBP14.48□□□□□ -0.09
CAPN3-220ENST00000569827 RAB11FIP3O75154 756 aa14.48□□□□□ -0.09
CAPN3-220ENST00000569827 PRDM1O75626 825 aa14.48□□□□□ -0.09
CAPN3-220ENST00000569827 SNAI1O95863 264 aaPredicted RBP14.48□□□□□ -0.09
CAPN3-220ENST00000569827 NDUFB10O96000 172 aa14.48□□□□□ -0.09
CAPN3-220ENST00000569827 AKR1A1P14550 325 aa14.48□□□□□ -0.09
CAPN3-220ENST00000569827 FOSL2P15408 326 aa14.48□□□□□ -0.09
CAPN3-220ENST00000569827 RAG1P15918 1043 aa14.48□□□□□ -0.09
CAPN3-220ENST00000569827 C20orf194Q5TEA3 1177 aa14.48□□□□□ -0.09
CAPN3-220ENST00000569827 DDRGK1Q96HY6 314 aa14.48□□□□□ -0.09
CAPN3-220ENST00000569827 RAVER2Q9HCJ3 691 aaKnown RBP14.48□□□□□ -0.09
CAPN3-220ENST00000569827 DDX19BQ9UMR2 479 aa14.48□□□□□ -0.09
CAPN3-220ENST00000569827 TACC3Q9Y6A5 838 aa14.48□□□□□ -0.09
CAPN3-220ENST00000569827 CHD7Q9P2D1 2997 aa14.48□□□□□ -0.09
CAPN3-220ENST00000569827 ROBO3Q96MS0 1386 aa14.47□□□□□ -0.09
CAPN3-220ENST00000569827 PTGS1P23219 599 aa14.47□□□□□ -0.09
CAPN3-220ENST00000569827 ACLYP53396 1101 aa14.47□□□□□ -0.09
CAPN3-220ENST00000569827 SMAD3P84022 425 aaKnown RBP14.47□□□□□ -0.09
CAPN3-220ENST00000569827 FAAP100Q0VG06 881 aa14.47□□□□□ -0.09
CAPN3-220ENST00000569827 C1orf53Q5VUE5 145 aa14.47□□□□□ -0.09
CAPN3-220ENST00000569827 LRRC47Q8N1G4 583 aaKnown RBP14.47□□□□□ -0.09
CAPN3-220ENST00000569827 USP38Q8NB14 1042 aa14.47□□□□□ -0.09
CAPN3-220ENST00000569827 KIFC2Q96AC6 838 aa14.47□□□□□ -0.09
CAPN3-220ENST00000569827 EPB41L4AQ9HCS5 686 aaPredicted RBP14.47□□□□□ -0.09
CAPN3-220ENST00000569827 STARD7Q9NQZ5 370 aa14.47□□□□□ -0.09
CAPN3-220ENST00000569827 CNPY2Q9Y2B0 182 aa14.47□□□□□ -0.09
CAPN3-220ENST00000569827 DDX49Q9Y6V7 483 aaKnown RBP14.47□□□□□ -0.09
CAPN3-220ENST00000569827 GSG1L2A8MUP6 293 aa14.46□□□□□ -0.09
CAPN3-220ENST00000569827 KIAA0355O15063 1070 aa14.46□□□□□ -0.09
CAPN3-220ENST00000569827 FPGSQ05932 587 aa14.46□□□□□ -0.09
CAPN3-220ENST00000569827 GRIN2CQ14957 1233 aa14.46□□□□□ -0.09
CAPN3-220ENST00000569827 KCNA10Q16322 511 aa14.46□□□□□ -0.09
CAPN3-220ENST00000569827 OSBP2Q969R2 916 aa14.46□□□□□ -0.09
CAPN3-220ENST00000569827 DDX11Q96FC9 970 aa14.46□□□□□ -0.09
CAPN3-220ENST00000569827 FGD4Q96M96 766 aa14.46□□□□□ -0.09
CAPN3-220ENST00000569827 STRBPQ96SI9 672 aaKnown RBP14.46□□□□□ -0.09
CAPN3-220ENST00000569827 TEX13BQ9BXU2 312 aa14.46□□□□□ -0.09
CAPN3-220ENST00000569827 MKNK2Q9HBH9 465 aa14.46□□□□□ -0.09
CAPN3-220ENST00000569827 HOMER2Q9NSB8 354 aa14.46□□□□□ -0.09
CAPN3-220ENST00000569827 ARPP21Q9UBL0 812 aaPredicted RBP14.46□□□□□ -0.09
CAPN3-220ENST00000569827 NCOR1O75376 2440 aa14.45□□□□□ -0.1
CAPN3-220ENST00000569827 GRXCR1A8MXD5 290 aa14.45□□□□□ -0.1
CAPN3-220ENST00000569827 F5H6K3 240 aa14.45□□□□□ -0.1
CAPN3-220ENST00000569827 M0R2C6 588 aa14.45□□□□□ -0.1
CAPN3-220ENST00000569827 C6orf222P0C671 652 aaPredicted RBP14.45□□□□□ -0.1
CAPN3-220ENST00000569827 KLRC3Q07444 240 aa14.45□□□□□ -0.1
CAPN3-220ENST00000569827 RASGRP2Q7LDG7 609 aa14.45□□□□□ -0.1
CAPN3-220ENST00000569827 PPP1R12CQ9BZL4 782 aa14.45□□□□□ -0.1
CAPN3-220ENST00000569827 LRRCC1Q9C099 1032 aa14.45□□□□□ -0.1
CAPN3-220ENST00000569827 CLIP2Q9UDT6 1046 aa14.45□□□□□ -0.1
CAPN3-220ENST00000569827 NRBP1Q9UHY1 535 aa14.45□□□□□ -0.1
CAPN3-220ENST00000569827 ISY1Q9ULR0 285 aaKnown RBP14.45□□□□□ -0.1
CAPN3-220ENST00000569827 DIS3Q9Y2L1 958 aaKnown RBP14.45□□□□□ -0.1
CAPN3-220ENST00000569827 DNAJC25-GNG10A0A024R161 153 aa14.44□□□□□ -0.1
CAPN3-220ENST00000569827 ACRP10323 421 aa14.44□□□□□ -0.1
CAPN3-220ENST00000569827 MS4A1P11836 297 aa14.44□□□□□ -0.1
CAPN3-220ENST00000569827 DNAJB2P25686 324 aa14.44□□□□□ -0.1
CAPN3-220ENST00000569827 PBX2P40425 430 aa14.44□□□□□ -0.1
CAPN3-220ENST00000569827 ZSCAN25Q6NSZ9 544 aa14.44□□□□□ -0.1
CAPN3-220ENST00000569827 KLHDC9Q8NEP7 349 aa14.44□□□□□ -0.1
CAPN3-220ENST00000569827 CEP95Q96GE4 821 aa14.44□□□□□ -0.1
CAPN3-220ENST00000569827 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.44□□□□□ -0.1
CAPN3-220ENST00000569827 PRDM6Q9NQX0 595 aa14.44□□□□□ -0.1
CAPN3-220ENST00000569827 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.44□□□□□ -0.1
CAPN3-220ENST00000569827 FAM184BQ9ULE4 1060 aa14.44□□□□□ -0.1
CAPN3-220ENST00000569827 DCDC2CA8MYV0 355 aa14.43□□□□□ -0.1
CAPN3-220ENST00000569827 GPAA1O43292 621 aa14.43□□□□□ -0.1
CAPN3-220ENST00000569827 TDO2P48775 406 aa14.43□□□□□ -0.1
CAPN3-220ENST00000569827 SNAP25P60880 206 aa14.43□□□□□ -0.1
CAPN3-220ENST00000569827 BEX3Q00994 111 aa14.43□□□□□ -0.1
CAPN3-220ENST00000569827 ACVR2BQ13705 512 aa14.43□□□□□ -0.1
CAPN3-220ENST00000569827 CCDC144BQ3MJ40 725 aa14.43□□□□□ -0.1
CAPN3-220ENST00000569827 CCSAPQ6IQ19 270 aaPredicted RBP14.43□□□□□ -0.1
CAPN3-220ENST00000569827 PPM1EQ8WY54 764 aa14.43□□□□□ -0.1
CAPN3-220ENST00000569827 VTI1AQ96AJ9 217 aa14.43□□□□□ -0.1
CAPN3-220ENST00000569827 SEC62Q99442 399 aaKnown RBP14.43□□□□□ -0.1
CAPN3-220ENST00000569827 NYAP2Q9P242 653 aa14.43□□□□□ -0.1
CAPN3-220ENST00000569827 TBX21Q9UL17 535 aa14.43□□□□□ -0.1
CAPN3-220ENST00000569827 CTDP1Q9Y5B0 961 aaPredicted RBP14.43□□□□□ -0.1
CAPN3-220ENST00000569827 TRIP12Q14669 1992 aaPredicted RBP14.43□□□□□ -0.1
CAPN3-220ENST00000569827 SYNGAP1Q96PV0 1343 aa14.42□□□□□ -0.1
CAPN3-220ENST00000569827 IGKV6D-41A0A0C4DH26 115 aa14.42□□□□□ -0.1
CAPN3-220ENST00000569827 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.42□□□□□ -0.1
CAPN3-220ENST00000569827 ZBED4O75132 1171 aa14.42□□□□□ -0.1
CAPN3-220ENST00000569827 APPP05067 770 aa14.42□□□□□ -0.1
CAPN3-220ENST00000569827 ASGR1P07306 291 aa14.42□□□□□ -0.1
CAPN3-220ENST00000569827 COPB2P35606 906 aa14.42□□□□□ -0.1
CAPN3-220ENST00000569827 CNTN2Q02246 1040 aa14.42□□□□□ -0.1
CAPN3-220ENST00000569827 SBK1Q52WX2 424 aa14.42□□□□□ -0.1
CAPN3-220ENST00000569827 C16orf59Q7L2K0 433 aa14.42□□□□□ -0.1
CAPN3-220ENST00000569827 ARMCX2Q7L311 632 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms