RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 MRVI1Q9Y6F6 885 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 USP17L10C9JJH3 530 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 PPP1R11O60927 126 aaPredicted RBP12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 MAP3K10Q02779 954 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 RILPL1Q5EBL4 403 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 BLIDQ8IZY5 108 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 SPICE1Q8N0Z3 855 aa12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 GLIS2Q9BZE0 524 aaPredicted RBP12.56□□□□□ -0.4
PDXDC1-216ENST00000569715 CAP2P40123 477 aa12.55□□□□□ -0.4
PDXDC1-216ENST00000569715 NAPAP54920 295 aa12.55□□□□□ -0.4
PDXDC1-216ENST00000569715 CAMK4Q16566 473 aa12.55□□□□□ -0.4
PDXDC1-216ENST00000569715 GPATCH4Q5T3I0 446 aaKnown RBP12.55□□□□□ -0.4
PDXDC1-216ENST00000569715 PIK3AP1Q6ZUJ8 805 aa12.55□□□□□ -0.4
PDXDC1-216ENST00000569715 FSIP1Q8NA03 581 aa12.55□□□□□ -0.4
PDXDC1-216ENST00000569715 PCDHA4Q9UN74 947 aa12.55□□□□□ -0.4
PDXDC1-216ENST00000569715 PHF20L1A8MW92 1017 aa12.55□□□□□ -0.4
PDXDC1-216ENST00000569715 NBPF12Q5TAG4 269 aaPredicted RBP12.55□□□□□ -0.4
PDXDC1-216ENST00000569715 GMCL1P1Q8NEA9 526 aa12.55□□□□□ -0.4
PDXDC1-216ENST00000569715 DCAF4Q8WV16 495 aa12.55□□□□□ -0.4
PDXDC1-216ENST00000569715 COA7Q96BR5 231 aa12.55□□□□□ -0.4
PDXDC1-216ENST00000569715 M0R2N6 131 aa12.55□□□□□ -0.4
PDXDC1-216ENST00000569715 ADALQ6DHV7 355 aa12.55□□□□□ -0.4
PDXDC1-216ENST00000569715 CLIC6Q96NY7 704 aa12.55□□□□□ -0.4
PDXDC1-216ENST00000569715 GGA3Q9NZ52 723 aa12.55□□□□□ -0.4
PDXDC1-216ENST00000569715 FZD1Q9UP38 647 aa12.55□□□□□ -0.4
PDXDC1-216ENST00000569715 A0A1B0GVL5 298 aa12.54□□□□□ -0.4
PDXDC1-216ENST00000569715 C9orf131Q5VYM1 1079 aa12.54□□□□□ -0.4
PDXDC1-216ENST00000569715 LRSAM1Q6UWE0 723 aa12.54□□□□□ -0.4
PDXDC1-216ENST00000569715 CCDC148Q8NFR7 591 aa12.54□□□□□ -0.4
PDXDC1-216ENST00000569715 CALML3P27482 149 aa12.54□□□□□ -0.4
PDXDC1-216ENST00000569715 GRIN1Q05586 938 aa12.54□□□□□ -0.4
PDXDC1-216ENST00000569715 SNW1Q13573 536 aaKnown RBP12.54□□□□□ -0.4
PDXDC1-216ENST00000569715 ENGASEQ8NFI3 743 aa12.54□□□□□ -0.4
PDXDC1-216ENST00000569715 MRPS27Q92552 414 aaKnown RBP12.54□□□□□ -0.4
PDXDC1-216ENST00000569715 ZMYND12Q9H0C1 365 aa12.54□□□□□ -0.4
PDXDC1-216ENST00000569715 PCDHA6Q9UN73 950 aa12.54□□□□□ -0.4
PDXDC1-216ENST00000569715 PCDHA8Q9Y5H6 950 aa12.54□□□□□ -0.4
PDXDC1-216ENST00000569715 A0A1W2PQ27 194 aa12.53□□□□□ -0.4
PDXDC1-216ENST00000569715 A0A1W2PQ64 194 aa12.53□□□□□ -0.4
PDXDC1-216ENST00000569715 A0A1W2PQD8 194 aa12.53□□□□□ -0.4
PDXDC1-216ENST00000569715 SNAP25P60880 206 aa12.53□□□□□ -0.4
PDXDC1-216ENST00000569715 ZYXQ15942 572 aaKnown RBP12.53□□□□□ -0.4
PDXDC1-216ENST00000569715 DAGLBQ8NCG7 672 aa12.53□□□□□ -0.4
PDXDC1-216ENST00000569715 GMCL1Q96IK5 515 aa12.53□□□□□ -0.4
PDXDC1-216ENST00000569715 NUP62CLQ9H1M0 184 aa12.53□□□□□ -0.4
PDXDC1-216ENST00000569715 PPP6R2O75170 966 aa12.53□□□□□ -0.4
PDXDC1-216ENST00000569715 NDUFA8P51970 172 aa12.53□□□□□ -0.4
PDXDC1-216ENST00000569715 MTMR8Q96EF0 704 aa12.53□□□□□ -0.4
PDXDC1-216ENST00000569715 ARHGEF10LQ9HCE6 1279 aa12.53□□□□□ -0.4
PDXDC1-216ENST00000569715 TMX2Q9Y320 296 aa12.53□□□□□ -0.4
PDXDC1-216ENST00000569715 SMCO2A6NFE2 343 aa12.53□□□□□ -0.4
PDXDC1-216ENST00000569715 SHC4Q6S5L8 630 aa12.53□□□□□ -0.4
PDXDC1-216ENST00000569715 CCDC73Q6ZRK6 1079 aa12.53□□□□□ -0.4
PDXDC1-216ENST00000569715 CLSTN2Q9H4D0 955 aa12.53□□□□□ -0.4
PDXDC1-216ENST00000569715 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.53□□□□□ -0.4
PDXDC1-216ENST00000569715 PNMA6FA0A0J9YX94 578 aa12.52□□□□□ -0.4
PDXDC1-216ENST00000569715 TRIM75PA6NK02 468 aa12.52□□□□□ -0.4
PDXDC1-216ENST00000569715 ZNF174Q15697 407 aa12.52□□□□□ -0.4
PDXDC1-216ENST00000569715 TTC38Q5R3I4 469 aa12.52□□□□□ -0.4
PDXDC1-216ENST00000569715 DLK2Q6UY11 383 aa12.52□□□□□ -0.4
PDXDC1-216ENST00000569715 GRPEL1Q9HAV7 217 aa12.52□□□□□ -0.4
PDXDC1-216ENST00000569715 DDX19AQ9NUU7 478 aaKnown RBP12.52□□□□□ -0.4
PDXDC1-216ENST00000569715 SSC5DA1L4H1 1573 aa12.52□□□□□ -0.4
PDXDC1-216ENST00000569715 DOCK1Q14185 1865 aa12.52□□□□□ -0.4
PDXDC1-216ENST00000569715 SMCHD1A6NHR9 2005 aa12.52□□□□□ -0.41
PDXDC1-216ENST00000569715 TMEM232C9JQI7 657 aa12.52□□□□□ -0.41
PDXDC1-216ENST00000569715 ZBTB5O15062 677 aa12.52□□□□□ -0.41
PDXDC1-216ENST00000569715 TAL1P17542 331 aaPredicted RBP12.52□□□□□ -0.41
PDXDC1-216ENST00000569715 FAM160A1Q05DH4 1040 aa12.52□□□□□ -0.41
PDXDC1-216ENST00000569715 SPECC1Q5M775 1068 aa12.52□□□□□ -0.41
PDXDC1-216ENST00000569715 CKAP2LQ8IYA6 745 aa12.52□□□□□ -0.41
PDXDC1-216ENST00000569715 FBXO2Q9UK22 296 aaPredicted RBP12.52□□□□□ -0.41
PDXDC1-216ENST00000569715 INPP5BP32019 993 aa12.52□□□□□ -0.41
PDXDC1-216ENST00000569715 QRICH1Q2TAL8 776 aa12.52□□□□□ -0.41
PDXDC1-216ENST00000569715 FMR1NBQ8N0W7 255 aaPredicted RBP12.52□□□□□ -0.41
PDXDC1-216ENST00000569715 RBSNQ9H1K0 784 aa12.52□□□□□ -0.41
PDXDC1-216ENST00000569715 NOL7Q9UMY1 257 aaKnown RBP12.52□□□□□ -0.41
PDXDC1-216ENST00000569715 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 ASNSP08243 561 aa12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 BMP3P12645 472 aa12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 XRCC6P12956 609 aaKnown RBP eCLIP12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 PFKFB1P16118 471 aa12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 CDC37Q16543 378 aaPredicted RBP12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 APOBEC3FQ8IUX4 373 aaKnown RBP12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 TMEM260Q9NX78 707 aa12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 DGKZQ13574 1117 aa12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 INF2Q27J81 1249 aa12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 FAM83BQ5T0W9 1011 aa12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 JMYQ8N9B5 988 aa12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 KRI1Q8N9T8 703 aaKnown RBP12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 CCDC12Q8WUD4 166 aaPredicted RBP12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 PANK2Q9BZ23 570 aa12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 TNMDQ9H2S6 317 aa12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 CCDC194A0A1B0GVG4 234 aa12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 CMA1P23946 247 aa12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 IKQ13123 557 aaPredicted RBP12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 GALNT17Q6IS24 598 aa12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 ZNF341Q9BYN7 854 aa12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 C6orf50Q9HD87 102 aa12.51□□□□□ -0.41
PDXDC1-216ENST00000569715 BIN2Q9UBW5 565 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms