RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 ZNF654Q8IZM8 581 aa18.69■□□□□ 0.58
USB1-215ENST00000569252 CHURC1Q8WUH1 139 aa18.69■□□□□ 0.58
USB1-215ENST00000569252 GMCL1Q96IK5 515 aa18.69■□□□□ 0.58
USB1-215ENST00000569252 RPAP3Q9H6T3 665 aaPredicted RBP18.69■□□□□ 0.58
USB1-215ENST00000569252 AGTPBP1Q9UPW5 1226 aa18.69■□□□□ 0.58
USB1-215ENST00000569252 CTDP1Q9Y5B0 961 aaPredicted RBP18.69■□□□□ 0.58
USB1-215ENST00000569252 DDAH1O94760 285 aa18.68■□□□□ 0.58
USB1-215ENST00000569252 VCAM1P19320 739 aa18.68■□□□□ 0.58
USB1-215ENST00000569252 IRX3P78415 501 aaPredicted RBP18.68■□□□□ 0.58
USB1-215ENST00000569252 APOBRQ0VD83 1088 aa18.68■□□□□ 0.58
USB1-215ENST00000569252 KIF22Q14807 665 aa18.68■□□□□ 0.58
USB1-215ENST00000569252 GPATCH4Q5T3I0 446 aaKnown RBP18.68■□□□□ 0.58
USB1-215ENST00000569252 ANKRD23Q86SG2 305 aa18.68■□□□□ 0.58
USB1-215ENST00000569252 GPHNQ9NQX3 736 aaPredicted RBP18.68■□□□□ 0.58
USB1-215ENST00000569252 HOXC10Q9NYD6 342 aa18.68■□□□□ 0.58
USB1-215ENST00000569252 RBM27Q9P2N5 1060 aaKnown RBP18.68■□□□□ 0.58
USB1-215ENST00000569252 GABRQQ9UN88 632 aa18.68■□□□□ 0.58
USB1-215ENST00000569252 CCDC196A0A1B0GTZ2 297 aa18.67■□□□□ 0.58
USB1-215ENST00000569252 FMNL1O95466 1100 aaPredicted RBP18.67■□□□□ 0.58
USB1-215ENST00000569252 MCM2P49736 904 aa18.67■□□□□ 0.58
USB1-215ENST00000569252 GNAQP50148 359 aa18.67■□□□□ 0.58
USB1-215ENST00000569252 PRKCZQ05513 592 aa18.67■□□□□ 0.58
USB1-215ENST00000569252 PPP2R5BQ15173 497 aa18.67■□□□□ 0.58
USB1-215ENST00000569252 ASPRV1Q53RT3 343 aa18.67■□□□□ 0.58
USB1-215ENST00000569252 FAM83BQ5T0W9 1011 aa18.67■□□□□ 0.58
USB1-215ENST00000569252 SAMD1Q6SPF0 538 aaPredicted RBP18.67■□□□□ 0.58
USB1-215ENST00000569252 DPF3Q92784 378 aa18.67■□□□□ 0.58
USB1-215ENST00000569252 MAP3K14Q99558 947 aa18.67■□□□□ 0.58
USB1-215ENST00000569252 KIF2CQ99661 725 aa18.67■□□□□ 0.58
USB1-215ENST00000569252 ZCCHC17Q9NP64 241 aaKnown RBP18.67■□□□□ 0.58
USB1-215ENST00000569252 SRRDQ9UH36 339 aa18.67■□□□□ 0.58
USB1-215ENST00000569252 FEM1BQ9UK73 627 aa18.67■□□□□ 0.58
USB1-215ENST00000569252 SLC45A1Q9Y2W3 748 aa18.67■□□□□ 0.58
USB1-215ENST00000569252 MYPNQ86TC9 1320 aa18.67■□□□□ 0.58
USB1-215ENST00000569252 LAMA3Q16787 3333 aa18.67■□□□□ 0.58
USB1-215ENST00000569252 TMEM232C9JQI7 657 aa18.66■□□□□ 0.58
USB1-215ENST00000569252 FLOT1O75955 427 aa18.66■□□□□ 0.58
USB1-215ENST00000569252 PDHBP11177 359 aa18.66■□□□□ 0.58
USB1-215ENST00000569252 CCL5P13501 91 aa18.66■□□□□ 0.58
USB1-215ENST00000569252 HOXA7P31268 230 aaPredicted RBP18.66■□□□□ 0.58
USB1-215ENST00000569252 AK2P54819 239 aa18.66■□□□□ 0.58
USB1-215ENST00000569252 COG2Q14746 738 aa18.66■□□□□ 0.58
USB1-215ENST00000569252 ARHGEF6Q15052 776 aa18.66■□□□□ 0.58
USB1-215ENST00000569252 GPAT2Q6NUI2 795 aa18.66■□□□□ 0.58
USB1-215ENST00000569252 CATSPERGQ6ZRH7 1159 aa18.66■□□□□ 0.58
USB1-215ENST00000569252 KCTD1Q719H9 257 aa18.66■□□□□ 0.58
USB1-215ENST00000569252 FAM160B2Q86V87 743 aa18.66■□□□□ 0.58
USB1-215ENST00000569252 ZNF274Q96GC6 653 aaPredicted RBP18.66■□□□□ 0.58
USB1-215ENST00000569252 LZTS2Q9BRK4 669 aa18.66■□□□□ 0.58
USB1-215ENST00000569252 AGXT2Q9BYV1 514 aa18.66■□□□□ 0.58
USB1-215ENST00000569252 SENP2Q9HC62 589 aa18.66■□□□□ 0.58
USB1-215ENST00000569252 GPCPD1Q9NPB8 672 aa18.66■□□□□ 0.58
USB1-215ENST00000569252 RBM28Q9NW13 759 aaKnown RBP18.66■□□□□ 0.58
USB1-215ENST00000569252 GOLGA8BA8MQT2 603 aa18.65■□□□□ 0.58
USB1-215ENST00000569252 METAP2P50579 478 aaKnown RBP eCLIP18.65■□□□□ 0.58
USB1-215ENST00000569252 STAT2P52630 851 aa18.65■□□□□ 0.58
USB1-215ENST00000569252 COL9A3Q14050 684 aaPredicted RBP18.65■□□□□ 0.58
USB1-215ENST00000569252 TOB2Q14106 344 aaPredicted RBP18.65■□□□□ 0.58
USB1-215ENST00000569252 TREML2Q5T2D2 321 aa18.65■□□□□ 0.58
USB1-215ENST00000569252 APOA5Q6Q788 366 aa18.65■□□□□ 0.58
USB1-215ENST00000569252 NOL8Q76FK4 1167 aaKnown RBP18.65■□□□□ 0.58
USB1-215ENST00000569252 MICU3Q86XE3 530 aa18.65■□□□□ 0.58
USB1-215ENST00000569252 PRPF38AQ8NAV1 312 aaKnown RBP18.65■□□□□ 0.58
USB1-215ENST00000569252 FANCBQ8NB91 859 aa18.65■□□□□ 0.58
USB1-215ENST00000569252 RAET1EQ8TD07 263 aa18.65■□□□□ 0.58
USB1-215ENST00000569252 SMCR8Q8TEV9 937 aaPredicted RBP18.65■□□□□ 0.58
USB1-215ENST00000569252 PARK7Q99497 189 aaKnown RBP18.65■□□□□ 0.58
USB1-215ENST00000569252 NUP88Q99567 741 aaPredicted RBP18.65■□□□□ 0.58
USB1-215ENST00000569252 UNC93B1Q9H1C4 597 aa18.65■□□□□ 0.58
USB1-215ENST00000569252 LIMCH1Q9UPQ0 1083 aa18.65■□□□□ 0.58
USB1-215ENST00000569252 FRMPD2Q68DX3 1309 aaPredicted RBP18.65■□□□□ 0.58
USB1-215ENST00000569252 MGAMO43451 1857 aa18.65■□□□□ 0.58
USB1-215ENST00000569252 GREB1LQ9C091 1923 aaPredicted RBP18.64■□□□□ 0.58
USB1-215ENST00000569252 GOLGA8AA7E2F4 631 aa18.64■□□□□ 0.57
USB1-215ENST00000569252 DHX16O60231 1041 aaKnown RBP18.64■□□□□ 0.57
USB1-215ENST00000569252 ELNP15502 786 aa18.64■□□□□ 0.57
USB1-215ENST00000569252 GRK4P32298 578 aa18.64■□□□□ 0.57
USB1-215ENST00000569252 RCAN1P53805 252 aa18.64■□□□□ 0.57
USB1-215ENST00000569252 ZNF543Q08ER8 600 aa18.64■□□□□ 0.57
USB1-215ENST00000569252 TROAPQ12815 778 aa18.64■□□□□ 0.57
USB1-215ENST00000569252 RTN1Q16799 776 aa18.64■□□□□ 0.57
USB1-215ENST00000569252 KIAA1755Q5JYT7 1200 aa18.64■□□□□ 0.57
USB1-215ENST00000569252 CPLX2Q6PUV4 134 aaKnown RBP18.64■□□□□ 0.57
USB1-215ENST00000569252 CCDC144CPQ8IYA2 1237 aa18.64■□□□□ 0.57
USB1-215ENST00000569252 GTF3C2Q8WUA4 911 aaPredicted RBP18.64■□□□□ 0.57
USB1-215ENST00000569252 ZSCAN31Q96LW9 406 aaPredicted RBP18.64■□□□□ 0.57
USB1-215ENST00000569252 LARP6Q9BRS8 491 aaKnown RBP18.64■□□□□ 0.57
USB1-215ENST00000569252 MYL10Q9BUA6 226 aa18.64■□□□□ 0.57
USB1-215ENST00000569252 SLKQ9H2G2 1235 aaPredicted RBP18.64■□□□□ 0.57
USB1-215ENST00000569252 BIN2Q9UBW5 565 aaPredicted RBP18.64■□□□□ 0.57
USB1-215ENST00000569252 BRPF3Q9ULD4 1205 aa18.64■□□□□ 0.57
USB1-215ENST00000569252 MYH4Q9Y623 1939 aa18.63■□□□□ 0.57
USB1-215ENST00000569252 ZBED4O75132 1171 aa18.63■□□□□ 0.57
USB1-215ENST00000569252 GOLGA8HP0CJ92 632 aa18.63■□□□□ 0.57
USB1-215ENST00000569252 SNHG28P0DPA3 235 aa18.63■□□□□ 0.57
USB1-215ENST00000569252 GRM4Q14833 912 aa18.63■□□□□ 0.57
USB1-215ENST00000569252 KIFC2Q96AC6 838 aa18.63■□□□□ 0.57
USB1-215ENST00000569252 SLF1Q9BQI6 1058 aa18.63■□□□□ 0.57
USB1-215ENST00000569252 RNF208Q9H0X6 261 aa18.63■□□□□ 0.57
USB1-215ENST00000569252 ASCC2Q9H1I8 757 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms