RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 MROH5Q6ZUA9 1318 aa7.4□□□□□ -1.22
CDH13-212ENST00000569144 LAMA2P24043 3122 aaKnown RBP7.39□□□□□ -1.23
CDH13-212ENST00000569144 TMEM265A0A087WTH1 108 aa7.39□□□□□ -1.23
CDH13-212ENST00000569144 PALM3A6NDB9 673 aaPredicted RBP7.39□□□□□ -1.23
CDH13-212ENST00000569144 TRIM75PA6NK02 468 aa7.39□□□□□ -1.23
CDH13-212ENST00000569144 LZTS3O60299 673 aaPredicted RBP7.39□□□□□ -1.23
CDH13-212ENST00000569144 CTNND1O60716 968 aaKnown RBP7.39□□□□□ -1.23
CDH13-212ENST00000569144 XRCC5P13010 732 aaKnown RBP7.39□□□□□ -1.23
CDH13-212ENST00000569144 MAP3K10Q02779 954 aa7.39□□□□□ -1.23
CDH13-212ENST00000569144 FKBP5Q13451 457 aaPredicted RBP7.39□□□□□ -1.23
CDH13-212ENST00000569144 TREML2Q5T2D2 321 aa7.39□□□□□ -1.23
CDH13-212ENST00000569144 CDC42EP5Q6NZY7 148 aa7.39□□□□□ -1.23
CDH13-212ENST00000569144 SOCS4Q8WXH5 440 aa7.39□□□□□ -1.23
CDH13-212ENST00000569144 PUS3Q9BZE2 481 aaKnown RBP7.39□□□□□ -1.23
CDH13-212ENST00000569144 PPP1R12CQ9BZL4 782 aa7.39□□□□□ -1.23
CDH13-212ENST00000569144 PRKAG2Q9UGJ0 569 aa7.39□□□□□ -1.23
CDH13-212ENST00000569144 DNMT3LQ9UJW3 386 aa7.39□□□□□ -1.23
CDH13-212ENST00000569144 NOD1Q9Y239 953 aa7.39□□□□□ -1.23
CDH13-212ENST00000569144 LRRFIP2Q9Y608 721 aaKnown RBP7.39□□□□□ -1.23
CDH13-212ENST00000569144 KIF16BQ96L93 1317 aa7.38□□□□□ -1.23
CDH13-212ENST00000569144 MYBBP1AQ9BQG0 1328 aaKnown RBP7.38□□□□□ -1.23
CDH13-212ENST00000569144 STAU1O95793 577 aaKnown RBP7.38□□□□□ -1.23
CDH13-212ENST00000569144 ZKSCAN1P17029 563 aaPredicted RBP7.38□□□□□ -1.23
CDH13-212ENST00000569144 CYP2B6P20813 491 aa7.38□□□□□ -1.23
CDH13-212ENST00000569144 CACNB2Q08289 660 aaPredicted RBP7.38□□□□□ -1.23
CDH13-212ENST00000569144 MAP3K12Q12852 859 aa7.38□□□□□ -1.23
CDH13-212ENST00000569144 CLN3Q13286 438 aa7.38□□□□□ -1.23
CDH13-212ENST00000569144 PABPC4Q13310 644 aaKnown RBP eCLIP7.38□□□□□ -1.23
CDH13-212ENST00000569144 SHHQ15465 462 aa7.38□□□□□ -1.23
CDH13-212ENST00000569144 TWISTNBQ3B726 338 aaPredicted RBP7.38□□□□□ -1.23
CDH13-212ENST00000569144 BEND3Q5T5X7 828 aa7.38□□□□□ -1.23
CDH13-212ENST00000569144 FOXD4L5Q5VV16 416 aaPredicted RBP7.38□□□□□ -1.23
CDH13-212ENST00000569144 PLEKHM2Q8IWE5 1019 aa7.38□□□□□ -1.23
CDH13-212ENST00000569144 ZFPM1Q8IX07 1006 aa7.38□□□□□ -1.23
CDH13-212ENST00000569144 USP40Q9NVE5 1235 aa7.38□□□□□ -1.23
CDH13-212ENST00000569144 MORF4L1Q9UBU8 362 aa7.38□□□□□ -1.23
CDH13-212ENST00000569144 MAFBQ9Y5Q3 323 aaPredicted RBP7.38□□□□□ -1.23
CDH13-212ENST00000569144 MAST2Q6P0Q8 1798 aa7.38□□□□□ -1.23
CDH13-212ENST00000569144 CDH23Q9H251 3354 aa7.37□□□□□ -1.23
CDH13-212ENST00000569144 GRM8O00222 908 aa7.37□□□□□ -1.23
CDH13-212ENST00000569144 APAF1O14727 1248 aa7.37□□□□□ -1.23
CDH13-212ENST00000569144 ENTPD3O75355 529 aa7.37□□□□□ -1.23
CDH13-212ENST00000569144 PDE8BO95263 885 aa7.37□□□□□ -1.23
CDH13-212ENST00000569144 CCND3P30281 292 aaPredicted RBP7.37□□□□□ -1.23
CDH13-212ENST00000569144 C9orf50Q5SZB4 431 aa7.37□□□□□ -1.23
CDH13-212ENST00000569144 VGLL2Q8N8G2 317 aa7.37□□□□□ -1.23
CDH13-212ENST00000569144 USP38Q8NB14 1042 aa7.37□□□□□ -1.23
CDH13-212ENST00000569144 WDR66Q8TBY9 1149 aa7.37□□□□□ -1.23
CDH13-212ENST00000569144 RNF217Q8TC41 542 aa7.37□□□□□ -1.23
CDH13-212ENST00000569144 TSR2Q969E8 191 aaKnown RBP7.37□□□□□ -1.23
CDH13-212ENST00000569144 IDI2Q9BXS1 227 aa7.37□□□□□ -1.23
CDH13-212ENST00000569144 SENP6Q9GZR1 1112 aaPredicted RBP7.37□□□□□ -1.23
CDH13-212ENST00000569144 ASCC2Q9H1I8 757 aaPredicted RBP7.37□□□□□ -1.23
CDH13-212ENST00000569144 ETNK1Q9HBU6 452 aa7.37□□□□□ -1.23
CDH13-212ENST00000569144 RFX7Q2KHR2 1363 aa7.36□□□□□ -1.23
CDH13-212ENST00000569144 SYNGAP1Q96PV0 1343 aa7.36□□□□□ -1.23
CDH13-212ENST00000569144 IL2RAP01589 272 aa7.36□□□□□ -1.23
CDH13-212ENST00000569144 ZEB1P37275 1124 aaPredicted RBP7.36□□□□□ -1.23
CDH13-212ENST00000569144 RGS3P49796 1198 aa7.36□□□□□ -1.23
CDH13-212ENST00000569144 RNF144AP50876 292 aaPredicted RBP7.36□□□□□ -1.23
CDH13-212ENST00000569144 RTP1P59025 263 aa7.36□□□□□ -1.23
CDH13-212ENST00000569144 PDE3AQ14432 1141 aa7.36□□□□□ -1.23
CDH13-212ENST00000569144 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.36□□□□□ -1.23
CDH13-212ENST00000569144 METTL24Q5JXM2 366 aa7.36□□□□□ -1.23
CDH13-212ENST00000569144 ERICH6Q7L0X2 663 aa7.36□□□□□ -1.23
CDH13-212ENST00000569144 CCDC84Q86UT8 332 aaPredicted RBP7.36□□□□□ -1.23
CDH13-212ENST00000569144 ATXN2LQ8WWM7 1075 aaKnown RBP7.36□□□□□ -1.23
CDH13-212ENST00000569144 USP6NLQ92738 828 aa7.36□□□□□ -1.23
CDH13-212ENST00000569144 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.36□□□□□ -1.23
CDH13-212ENST00000569144 PCDHGA11Q9Y5H2 935 aa7.36□□□□□ -1.23
CDH13-212ENST00000569144 PTPRFP10586 1907 aa7.36□□□□□ -1.23
CDH13-212ENST00000569144 DOCK1Q14185 1865 aa7.36□□□□□ -1.23
CDH13-212ENST00000569144 PLXNB2O15031 1838 aa7.36□□□□□ -1.23
CDH13-212ENST00000569144 LTBP2Q14767 1821 aa7.36□□□□□ -1.23
CDH13-212ENST00000569144 DOCK2Q92608 1830 aa7.36□□□□□ -1.23
CDH13-212ENST00000569144 TTC28Q96AY4 2481 aa7.36□□□□□ -1.23
CDH13-212ENST00000569144 MSCO60682 206 aa7.35□□□□□ -1.23
CDH13-212ENST00000569144 IFIT1P09914 478 aaKnown RBP7.35□□□□□ -1.23
CDH13-212ENST00000569144 PRDX5P30044 214 aa7.35□□□□□ -1.23
CDH13-212ENST00000569144 MAPK4P31152 587 aa7.35□□□□□ -1.23
CDH13-212ENST00000569144 GPC1P35052 558 aa7.35□□□□□ -1.23
CDH13-212ENST00000569144 RGS2P41220 211 aa7.35□□□□□ -1.23
CDH13-212ENST00000569144 HMGCS2P54868 508 aa7.35□□□□□ -1.23
CDH13-212ENST00000569144 GDF10P55107 478 aa7.35□□□□□ -1.23
CDH13-212ENST00000569144 SPP2Q13103 211 aa7.35□□□□□ -1.23
CDH13-212ENST00000569144 GRIN2CQ14957 1233 aa7.35□□□□□ -1.23
CDH13-212ENST00000569144 LRRC24Q50LG9 513 aa7.35□□□□□ -1.23
CDH13-212ENST00000569144 TRIM50Q86XT4 487 aa7.35□□□□□ -1.23
CDH13-212ENST00000569144 ZSCAN29Q8IWY8 852 aaPredicted RBP7.35□□□□□ -1.23
CDH13-212ENST00000569144 ZNF280CQ8ND82 737 aa7.35□□□□□ -1.23
CDH13-212ENST00000569144 APBA2Q99767 749 aa7.35□□□□□ -1.23
CDH13-212ENST00000569144 ESYT1Q9BSJ8 1104 aa7.35□□□□□ -1.23
CDH13-212ENST00000569144 C9orf78Q9NZ63 289 aaPredicted RBP7.35□□□□□ -1.23
CDH13-212ENST00000569144 PHIPQ8WWQ0 1821 aa7.35□□□□□ -1.23
CDH13-212ENST00000569144 LOC285556D6RIA3 1793 aa7.35□□□□□ -1.23
CDH13-212ENST00000569144 DOCK3Q8IZD9 2030 aa7.34□□□□□ -1.23
CDH13-212ENST00000569144 DDTLA6NHG4 134 aaPredicted RBP7.34□□□□□ -1.23
CDH13-212ENST00000569144 F6X3S4 739 aa7.34□□□□□ -1.23
CDH13-212ENST00000569144 DNM1LO00429 736 aa7.34□□□□□ -1.23
CDH13-212ENST00000569144 ALDH1L1O75891 902 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms