RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 PRR20EP86478 221 aa11□□□□□ -0.65
CAPN3-219ENST00000569136 PRR20CP86479 221 aa11□□□□□ -0.65
CAPN3-219ENST00000569136 PRR20DP86480 221 aa11□□□□□ -0.65
CAPN3-219ENST00000569136 PRR20BP86481 221 aa11□□□□□ -0.65
CAPN3-219ENST00000569136 PRR20AP86496 221 aa11□□□□□ -0.65
CAPN3-219ENST00000569136 CERKLQ49MI3 558 aaPredicted RBP11□□□□□ -0.65
CAPN3-219ENST00000569136 TSHZ3Q63HK5 1081 aa11□□□□□ -0.65
CAPN3-219ENST00000569136 TATDN1Q6P1N9 297 aa11□□□□□ -0.65
CAPN3-219ENST00000569136 LCORLQ8N3X6 602 aa11□□□□□ -0.65
CAPN3-219ENST00000569136 FSD1Q9BTV5 496 aa11□□□□□ -0.65
CAPN3-219ENST00000569136 PUS7LQ9H0K6 701 aaKnown RBP11□□□□□ -0.65
CAPN3-219ENST00000569136 OSBPL3Q9H4L5 887 aa11□□□□□ -0.65
CAPN3-219ENST00000569136 SWAP70Q9UH65 585 aa11□□□□□ -0.65
CAPN3-219ENST00000569136 SLC4A4Q9Y6R1 1079 aa11□□□□□ -0.65
CAPN3-219ENST00000569136 SALL3Q9BXA9 1300 aa11□□□□□ -0.65
CAPN3-219ENST00000569136 A0A0G2JLL6 359 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-219ENST00000569136 J3QL48 77 aa10.99□□□□□ -0.65
CAPN3-219ENST00000569136 TRAK2O60296 914 aa10.99□□□□□ -0.65
CAPN3-219ENST00000569136 PLCD1P51178 756 aa10.99□□□□□ -0.65
CAPN3-219ENST00000569136 SPP2Q13103 211 aa10.99□□□□□ -0.65
CAPN3-219ENST00000569136 PABPC4Q13310 644 aaKnown RBP eCLIP10.99□□□□□ -0.65
CAPN3-219ENST00000569136 TAF1CQ15572 869 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-219ENST00000569136 PRRT2Q7Z6L0 340 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-219ENST00000569136 PLEKHM2Q8IWE5 1019 aa10.99□□□□□ -0.65
CAPN3-219ENST00000569136 TRMT44Q8IYL2 757 aaKnown RBP10.99□□□□□ -0.65
CAPN3-219ENST00000569136 ZNF296Q8WUU4 475 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-219ENST00000569136 ZNF592Q92610 1267 aa10.99□□□□□ -0.65
CAPN3-219ENST00000569136 OSBP2Q969R2 916 aa10.99□□□□□ -0.65
CAPN3-219ENST00000569136 CCDC17Q96LX7 622 aa10.99□□□□□ -0.65
CAPN3-219ENST00000569136 IRX2Q9BZI1 471 aaPredicted RBP10.99□□□□□ -0.65
CAPN3-219ENST00000569136 NACAP1Q9BZK3 213 aa10.99□□□□□ -0.65
CAPN3-219ENST00000569136 ZNF287Q9HBT7 754 aa10.99□□□□□ -0.65
CAPN3-219ENST00000569136 ARAP2Q8WZ64 1704 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 FAM196BA6NMK8 535 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 USP17L12C9JPN9 530 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 USP17L21D6R901 530 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 PDHXO00330 501 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 PRKAB2O43741 272 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 TLR2O60603 784 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 FSHRP23945 695 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 BACE1P56817 501 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 SP3Q02447 781 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 GABPAQ06546 454 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 CRHR2Q13324 411 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 RRP1BQ14684 758 aaKnown RBP10.98□□□□□ -0.65
CAPN3-219ENST00000569136 ABCB5Q2M3G0 1257 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 NBPF20Q3BBV1 942 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 SBK1Q52WX2 424 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 ZMYM1Q5SVZ6 1142 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 C12orf60Q5U649 245 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 CTU1Q7Z7A3 348 aaKnown RBP10.98□□□□□ -0.65
CAPN3-219ENST00000569136 FAM43AQ8N2R8 423 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 SDR42E1Q8WUS8 393 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 ERO1AQ96HE7 468 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 HELLSQ9NRZ9 838 aa10.98□□□□□ -0.65
CAPN3-219ENST00000569136 CDV3Q9UKY7 258 aaKnown RBP10.98□□□□□ -0.65
CAPN3-219ENST00000569136 FAM187AA6NFU0 413 aa10.97□□□□□ -0.65
CAPN3-219ENST00000569136 TRIM75PA6NK02 468 aa10.97□□□□□ -0.65
CAPN3-219ENST00000569136 GSG1L2A8MUP6 293 aa10.97□□□□□ -0.65
CAPN3-219ENST00000569136 USP17L10C9JJH3 530 aa10.97□□□□□ -0.65
CAPN3-219ENST00000569136 GPAA1O43292 621 aa10.97□□□□□ -0.65
CAPN3-219ENST00000569136 GNRH1P01148 92 aa10.97□□□□□ -0.65
CAPN3-219ENST00000569136 APPP05067 770 aa10.97□□□□□ -0.65
CAPN3-219ENST00000569136 SLURP2P0DP57 97 aa10.97□□□□□ -0.65
CAPN3-219ENST00000569136 USP14P54578 494 aa10.97□□□□□ -0.65
CAPN3-219ENST00000569136 IRX6P78412 446 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-219ENST00000569136 MOGSQ13724 837 aa10.97□□□□□ -0.65
CAPN3-219ENST00000569136 KIF22Q14807 665 aa10.97□□□□□ -0.65
CAPN3-219ENST00000569136 SLFNL1Q499Z3 407 aa10.97□□□□□ -0.65
CAPN3-219ENST00000569136 GPAT2Q6NUI2 795 aa10.97□□□□□ -0.65
CAPN3-219ENST00000569136 CTR9Q6PD62 1173 aa10.97□□□□□ -0.65
CAPN3-219ENST00000569136 KCTD15Q96SI1 283 aaPredicted RBP10.97□□□□□ -0.65
CAPN3-219ENST00000569136 PARK7Q99497 189 aaKnown RBP10.97□□□□□ -0.65
CAPN3-219ENST00000569136 R3HDMLQ9H3Y0 253 aa10.97□□□□□ -0.65
CAPN3-219ENST00000569136 DNAJC18Q9H819 358 aa10.97□□□□□ -0.65
CAPN3-219ENST00000569136 TOR4AQ9NXH8 423 aa10.97□□□□□ -0.65
CAPN3-219ENST00000569136 TMOD4Q9NZQ9 345 aa10.97□□□□□ -0.65
CAPN3-219ENST00000569136 HIP1O00291 1037 aa10.96□□□□□ -0.65
CAPN3-219ENST00000569136 ADH1CP00326 375 aa10.96□□□□□ -0.65
CAPN3-219ENST00000569136 GH2P01242 217 aa10.96□□□□□ -0.65
CAPN3-219ENST00000569136 SLC3A2P08195 630 aaKnown RBP10.96□□□□□ -0.65
CAPN3-219ENST00000569136 SHMT1P34896 483 aa10.96□□□□□ -0.65
CAPN3-219ENST00000569136 DGKZQ13574 1117 aa10.96□□□□□ -0.65
CAPN3-219ENST00000569136 MCMDC2Q4G0Z9 681 aa10.96□□□□□ -0.65
CAPN3-219ENST00000569136 USP17L2Q6R6M4 530 aa10.96□□□□□ -0.65
CAPN3-219ENST00000569136 GADL1Q6ZQY3 521 aa10.96□□□□□ -0.65
CAPN3-219ENST00000569136 ARPP21Q9UBL0 812 aaPredicted RBP10.96□□□□□ -0.65
CAPN3-219ENST00000569136 ZBTB21Q9ULJ3 1066 aa10.96□□□□□ -0.65
CAPN3-219ENST00000569136 AGTPBP1Q9UPW5 1226 aa10.96□□□□□ -0.65
CAPN3-219ENST00000569136 AKAP11Q9UKA4 1901 aa10.96□□□□□ -0.66
CAPN3-219ENST00000569136 MYH2Q9UKX2 1941 aa10.96□□□□□ -0.66
CAPN3-219ENST00000569136 CHGBP05060 677 aa10.95□□□□□ -0.66
CAPN3-219ENST00000569136 HOXD10P28358 340 aa10.95□□□□□ -0.66
CAPN3-219ENST00000569136 HOXA7P31268 230 aaPredicted RBP10.95□□□□□ -0.66
CAPN3-219ENST00000569136 SOX11P35716 441 aa10.95□□□□□ -0.66
CAPN3-219ENST00000569136 CDK8P49336 464 aa10.95□□□□□ -0.66
CAPN3-219ENST00000569136 MFAP1P55081 439 aaKnown RBP10.95□□□□□ -0.66
CAPN3-219ENST00000569136 MCCD1P59942 119 aaPredicted RBP10.95□□□□□ -0.66
CAPN3-219ENST00000569136 RAB3GAP1Q15042 981 aa10.95□□□□□ -0.66
CAPN3-219ENST00000569136 SLC4A8Q2Y0W8 1093 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms