RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 PRO3102Q9H379 93 aa9.29□□□□□ -0.92
CDH3-209ENST00000569080 SLC38A10Q9HBR0 1119 aa9.29□□□□□ -0.92
CDH3-209ENST00000569080 CWC22Q9HCG8 908 aaKnown RBP9.29□□□□□ -0.92
CDH3-209ENST00000569080 RIPK3Q9Y572 518 aa9.29□□□□□ -0.92
CDH3-209ENST00000569080 TSPY2A6NKD2 308 aa9.28□□□□□ -0.92
CDH3-209ENST00000569080 RAD21O60216 631 aa9.28□□□□□ -0.92
CDH3-209ENST00000569080 STAT3P40763 770 aa9.28□□□□□ -0.92
CDH3-209ENST00000569080 ZNF792Q3KQV3 632 aa9.28□□□□□ -0.92
CDH3-209ENST00000569080 HABP4Q5JVS0 413 aaKnown RBP9.28□□□□□ -0.92
CDH3-209ENST00000569080 MFSD14CQ5VZR4 134 aa9.28□□□□□ -0.92
CDH3-209ENST00000569080 SLFN13Q68D06 897 aa9.28□□□□□ -0.92
CDH3-209ENST00000569080 SAMD1Q6SPF0 538 aaPredicted RBP9.28□□□□□ -0.92
CDH3-209ENST00000569080 NECAB2Q7Z6G3 386 aa9.28□□□□□ -0.92
CDH3-209ENST00000569080 PRPF38AQ8NAV1 312 aaKnown RBP9.28□□□□□ -0.92
CDH3-209ENST00000569080 RILPL2Q969X0 211 aa9.28□□□□□ -0.92
CDH3-209ENST00000569080 MAML3Q96JK9 1138 aa9.28□□□□□ -0.92
CDH3-209ENST00000569080 FGD4Q96M96 766 aa9.28□□□□□ -0.92
CDH3-209ENST00000569080 DDX20Q9UHI6 824 aaKnown RBP9.28□□□□□ -0.92
CDH3-209ENST00000569080 ZNF536O15090 1300 aa9.28□□□□□ -0.92
CDH3-209ENST00000569080 NEDD4P46934 1319 aa9.28□□□□□ -0.92
CDH3-209ENST00000569080 MCM3APO60318 1980 aa9.27□□□□□ -0.93
CDH3-209ENST00000569080 DNAJC25-GNG10A0A024R161 153 aa9.27□□□□□ -0.93
CDH3-209ENST00000569080 PGK2P07205 417 aa9.27□□□□□ -0.93
CDH3-209ENST00000569080 FCER1AP12319 257 aa9.27□□□□□ -0.93
CDH3-209ENST00000569080 BMP3P12645 472 aa9.27□□□□□ -0.93
CDH3-209ENST00000569080 COPB2P35606 906 aa9.27□□□□□ -0.93
CDH3-209ENST00000569080 OAZ1P54368 228 aa9.27□□□□□ -0.93
CDH3-209ENST00000569080 HAND2P61296 217 aa9.27□□□□□ -0.93
CDH3-209ENST00000569080 TTC22Q5TAA0 569 aa9.27□□□□□ -0.93
CDH3-209ENST00000569080 SNRNP48Q6IEG0 339 aaKnown RBP9.27□□□□□ -0.93
CDH3-209ENST00000569080 RCSD1Q6JBY9 416 aa9.27□□□□□ -0.93
CDH3-209ENST00000569080 DPP9Q86TI2 863 aa9.27□□□□□ -0.93
CDH3-209ENST00000569080 STAG1Q8WVM7 1258 aa9.27□□□□□ -0.93
CDH3-209ENST00000569080 MMP19Q99542 508 aa9.27□□□□□ -0.93
CDH3-209ENST00000569080 C11orf49Q9H6J7 331 aa9.27□□□□□ -0.93
CDH3-209ENST00000569080 FEM1BQ9UK73 627 aa9.27□□□□□ -0.93
CDH3-209ENST00000569080 STX8Q9UNK0 236 aa9.27□□□□□ -0.93
CDH3-209ENST00000569080 COLQQ9Y215 455 aaPredicted RBP9.27□□□□□ -0.93
CDH3-209ENST00000569080 LTBP2Q14767 1821 aa9.26□□□□□ -0.93
CDH3-209ENST00000569080 SMCHD1A6NHR9 2005 aa9.26□□□□□ -0.93
CDH3-209ENST00000569080 SEPT4O43236 478 aa9.26□□□□□ -0.93
CDH3-209ENST00000569080 RANBP6O60518 1105 aaKnown RBP9.26□□□□□ -0.93
CDH3-209ENST00000569080 MSCO60682 206 aa9.26□□□□□ -0.93
CDH3-209ENST00000569080 PLA2G6O60733 806 aa9.26□□□□□ -0.93
CDH3-209ENST00000569080 PCP11498 1178 aaKnown RBP9.26□□□□□ -0.93
CDH3-209ENST00000569080 STAT2P52630 851 aa9.26□□□□□ -0.93
CDH3-209ENST00000569080 PPP4R3BQ5MIZ7 849 aa9.26□□□□□ -0.93
CDH3-209ENST00000569080 CWC27Q6UX04 472 aaKnown RBP9.26□□□□□ -0.93
CDH3-209ENST00000569080 DPF3Q92784 378 aa9.26□□□□□ -0.93
CDH3-209ENST00000569080 KIFC2Q96AC6 838 aa9.26□□□□□ -0.93
CDH3-209ENST00000569080 RAVER2Q9HCJ3 691 aaKnown RBP9.26□□□□□ -0.93
CDH3-209ENST00000569080 TCP11L1Q9NUJ3 509 aa9.26□□□□□ -0.93
CDH3-209ENST00000569080 DIS3Q9Y2L1 958 aaKnown RBP9.26□□□□□ -0.93
CDH3-209ENST00000569080 TMEM232C9JQI7 657 aa9.25□□□□□ -0.93
CDH3-209ENST00000569080 DNM1LO00429 736 aa9.25□□□□□ -0.93
CDH3-209ENST00000569080 SNHG28P0DPA3 235 aa9.25□□□□□ -0.93
CDH3-209ENST00000569080 MCCP23508 829 aa9.25□□□□□ -0.93
CDH3-209ENST00000569080 SLC1A4P43007 532 aa9.25□□□□□ -0.93
CDH3-209ENST00000569080 FXR1P51114 621 aaKnown RBP eCLIP9.25□□□□□ -0.93
CDH3-209ENST00000569080 KCTD2Q14681 263 aa9.25□□□□□ -0.93
CDH3-209ENST00000569080 PRAMEF19Q5SWL8 479 aa9.25□□□□□ -0.93
CDH3-209ENST00000569080 AKNAD1Q5T1N1 836 aa9.25□□□□□ -0.93
CDH3-209ENST00000569080 CHRDL2Q6WN34 429 aa9.25□□□□□ -0.93
CDH3-209ENST00000569080 KCTD1Q719H9 257 aa9.25□□□□□ -0.93
CDH3-209ENST00000569080 FAM160B2Q86V87 743 aa9.25□□□□□ -0.93
CDH3-209ENST00000569080 CPXCR1Q8N123 301 aa9.25□□□□□ -0.93
CDH3-209ENST00000569080 TMEM47Q9BQJ4 181 aa9.25□□□□□ -0.93
CDH3-209ENST00000569080 TINF2Q9BSI4 451 aa9.25□□□□□ -0.93
CDH3-209ENST00000569080 DSCC1Q9BVC3 393 aa9.25□□□□□ -0.93
CDH3-209ENST00000569080 DIAPH3Q9NSV4 1193 aa9.25□□□□□ -0.93
CDH3-209ENST00000569080 NRBP1Q9UHY1 535 aa9.25□□□□□ -0.93
CDH3-209ENST00000569080 ASTN1O14525 1302 aa9.25□□□□□ -0.93
CDH3-209ENST00000569080 HIP1O00291 1037 aa9.24□□□□□ -0.93
CDH3-209ENST00000569080 EVI5O60447 810 aa9.24□□□□□ -0.93
CDH3-209ENST00000569080 ZBED4O75132 1171 aa9.24□□□□□ -0.93
CDH3-209ENST00000569080 ZNF865P0CJ78 1059 aaPredicted RBP9.24□□□□□ -0.93
CDH3-209ENST00000569080 FDX1P10109 184 aa9.24□□□□□ -0.93
CDH3-209ENST00000569080 PDHBP11177 359 aa9.24□□□□□ -0.93
CDH3-209ENST00000569080 TOP1P11387 765 aaKnown RBP9.24□□□□□ -0.93
CDH3-209ENST00000569080 TAL1P17542 331 aaPredicted RBP9.24□□□□□ -0.93
CDH3-209ENST00000569080 MFAP1P55081 439 aaKnown RBP9.24□□□□□ -0.93
CDH3-209ENST00000569080 LRRC26Q2I0M4 334 aa9.24□□□□□ -0.93
CDH3-209ENST00000569080 RRP12Q5JTH9 1297 aaKnown RBP9.24□□□□□ -0.93
CDH3-209ENST00000569080 ANO1Q5XXA6 986 aa9.24□□□□□ -0.93
CDH3-209ENST00000569080 MAMDC4Q6UXC1 1216 aa9.24□□□□□ -0.93
CDH3-209ENST00000569080 BTNL9Q6UXG8 535 aa9.24□□□□□ -0.93
CDH3-209ENST00000569080 ZNF467Q7Z7K2 595 aaPredicted RBP9.24□□□□□ -0.93
CDH3-209ENST00000569080 C7orf61Q8IZ16 206 aa9.24□□□□□ -0.93
CDH3-209ENST00000569080 DCAF4Q8WV16 495 aa9.24□□□□□ -0.93
CDH3-209ENST00000569080 SLC5A4Q9NY91 659 aa9.24□□□□□ -0.93
CDH3-209ENST00000569080 PCDH10Q9P2E7 1040 aa9.24□□□□□ -0.93
CDH3-209ENST00000569080 RBM27Q9P2N5 1060 aaKnown RBP9.24□□□□□ -0.93
CDH3-209ENST00000569080 PRR12Q9ULL5 1215 aa9.24□□□□□ -0.93
CDH3-209ENST00000569080 NR2E3Q9Y5X4 410 aa9.24□□□□□ -0.93
CDH3-209ENST00000569080 RAD50Q92878 1312 aa9.24□□□□□ -0.93
CDH3-209ENST00000569080 SYNGAP1Q96PV0 1343 aa9.24□□□□□ -0.93
CDH3-209ENST00000569080 ADCY6O43306 1168 aa9.23□□□□□ -0.93
CDH3-209ENST00000569080 SNAI1O95863 264 aaPredicted RBP9.23□□□□□ -0.93
CDH3-209ENST00000569080 CNGA1P29973 690 aa9.23□□□□□ -0.93
CDH3-209ENST00000569080 TTBK2Q6IQ55 1244 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms