RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 KRTAP4-8Q9BYQ9 185 aa5.33□□□□□ -1.56
HMGB1P6-201ENST00000569046 SP110Q9HB58 689 aa5.33□□□□□ -1.56
HMGB1P6-201ENST00000569046 CHST7Q9NS84 486 aa5.33□□□□□ -1.56
HMGB1P6-201ENST00000569046 STRIP2Q9ULQ0 834 aa5.33□□□□□ -1.56
HMGB1P6-201ENST00000569046 ZNF451Q9Y4E5 1061 aa5.33□□□□□ -1.56
HMGB1P6-201ENST00000569046 TMEM82A0PJX8 343 aa5.32□□□□□ -1.56
HMGB1P6-201ENST00000569046 ETFBP38117 255 aa5.32□□□□□ -1.56
HMGB1P6-201ENST00000569046 ZNF445P59923 1031 aa5.32□□□□□ -1.56
HMGB1P6-201ENST00000569046 MCF2L2Q86YR7 1114 aa5.32□□□□□ -1.56
HMGB1P6-201ENST00000569046 SMARCC1Q92922 1105 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P6-201ENST00000569046 BRF1Q92994 677 aa5.32□□□□□ -1.56
HMGB1P6-201ENST00000569046 G6PC3Q9BUM1 346 aa5.32□□□□□ -1.56
HMGB1P6-201ENST00000569046 GP6Q9HCN6 339 aa5.32□□□□□ -1.56
HMGB1P6-201ENST00000569046 TCFL5Q9UL49 500 aa5.32□□□□□ -1.56
HMGB1P6-201ENST00000569046 AQRO60306 1485 aaKnown RBP eCLIP5.32□□□□□ -1.56
HMGB1P6-201ENST00000569046 BIN1O00499 593 aa5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 SMAD7O15105 426 aaKnown RBP5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 FKTNO75072 461 aa5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 SYPP08247 313 aa5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 CD247P20963 164 aa5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 RPL10P27635 214 aaKnown RBP5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 DNAJA1P31689 397 aaKnown RBP5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 TRHRP34981 398 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 PCBP3P57721 371 aaKnown RBP5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 ARID5AQ03989 594 aa5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 GNL2Q13823 731 aaKnown RBP5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 GNPTABQ3T906 1256 aa5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 TIGD5Q53EQ6 642 aa5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 CRTC3Q6UUV7 619 aa5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 RNF111Q6ZNA4 994 aa5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 VPS37DQ86XT2 251 aa5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 LINC00116Q8NCU8 138 aa5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 LINC01599Q8WXQ3 324 aa5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 FAM168AQ92567 244 aa5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 HAUS7Q99871 368 aa5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 PHAXQ9H814 394 aaKnown RBP5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 SLC12A7Q9Y666 1083 aa5.31□□□□□ -1.56
HMGB1P6-201ENST00000569046 ZNF503-AS2A6NEH8 195 aa5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 H0Y8X5 98 aa5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 EFEMP2O95967 443 aa5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 HPXP02790 462 aa5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 SSBP05455 408 aaKnown RBP eCLIP5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 AFMP43652 599 aa5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 CEBPAP49715 358 aaPredicted RBP5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 SLC7A5Q01650 507 aa5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 SLC43A3Q8NBI5 491 aa5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 ASIC4Q96FT7 647 aa5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 KIRREL1Q96J84 757 aa5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 FGD4Q96M96 766 aa5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 GMLQ99445 158 aa5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 KLHL25Q9H0H3 589 aa5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 C19orf44Q9H6X5 657 aa5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 ZNF408Q9H9D4 720 aa5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 PRR13Q9NZ81 148 aa5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 SUSD2Q9UGT4 822 aa5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 RNF114Q9Y508 228 aa5.3□□□□□ -1.56
HMGB1P6-201ENST00000569046 TOPBP1Q92547 1522 aa5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 IFT140Q96RY7 1462 aa5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 NOTOA8MTQ0 251 aa5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 EPHX1P07099 455 aa5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 VAV1P15498 845 aa5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 BMP8BP34820 402 aa5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 RTP2Q5QGT7 225 aa5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 NOL9Q5SY16 702 aaKnown RBP5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 KIAA1211LQ6NV74 962 aa5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 VHLLQ6RSH7 139 aa5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 WAPLQ7Z5K2 1190 aa5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 ZSWIM9Q86XI8 627 aa5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 FIBCD1Q8N539 461 aa5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 PDZD8Q8NEN9 1154 aa5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 CCDC120Q96HB5 630 aa5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 FMNL2Q96PY5 1086 aa5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 DSCC1Q9BVC3 393 aa5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 FHOD1Q9Y613 1164 aa5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 TARBP1Q13395 1621 aaKnown RBP5.29□□□□□ -1.56
HMGB1P6-201ENST00000569046 TOP2AP11388 1531 aaKnown RBP5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 PAX4O43316 350 aa5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 ZNF205O95201 554 aa5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 GSNP06396 782 aa5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 KCNMB1Q16558 191 aa5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 NAALADL2Q58DX5 795 aa5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 HEATR6Q6AI08 1181 aaKnown RBP5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 ZNF513Q8N8E2 541 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 ADCY4Q8NFM4 1077 aa5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 ABHD4Q8TB40 342 aa5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 MICAL1Q8TDZ2 1067 aa5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 MYLIPQ8WY64 445 aa5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 DHX38Q92620 1227 aaKnown RBP5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 LIN37Q96GY3 246 aaPredicted RBP5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 HHIPL1Q96JK4 782 aa5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 SLC12A9Q9BXP2 914 aa5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 NOL6Q9H6R4 1146 aaKnown RBP5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 AP5S1Q9NUS5 200 aa5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 APEX2Q9UBZ4 518 aa5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 PRKAG3Q9UGI9 489 aa5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 ZMYM5Q9UJ78 669 aa5.28□□□□□ -1.56
HMGB1P6-201ENST00000569046 SSU72P8A0A1W2PR75 194 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms