RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 NAP1L2Q9ULW6 460 aaPredicted RBP19.53■□□□□ 0.72
COMMD4-224ENST00000568877 ADAMTS5Q9UNA0 930 aa19.53■□□□□ 0.72
COMMD4-224ENST00000568877 PCNTO95613 3336 aa19.53■□□□□ 0.72
COMMD4-224ENST00000568877 RXRAP19793 462 aa19.52■□□□□ 0.72
COMMD4-224ENST00000568877 KIF5BP33176 963 aa19.52■□□□□ 0.72
COMMD4-224ENST00000568877 SLC16A2P36021 539 aa19.52■□□□□ 0.72
COMMD4-224ENST00000568877 RCAN1P53805 252 aa19.52■□□□□ 0.72
COMMD4-224ENST00000568877 C17orf99Q6UX52 265 aa19.52■□□□□ 0.72
COMMD4-224ENST00000568877 MICU3Q86XE3 530 aa19.52■□□□□ 0.72
COMMD4-224ENST00000568877 CCDC144CPQ8IYA2 1237 aa19.52■□□□□ 0.72
COMMD4-224ENST00000568877 LARP6Q9BRS8 491 aaKnown RBP19.52■□□□□ 0.72
COMMD4-224ENST00000568877 UBA5Q9GZZ9 404 aa19.52■□□□□ 0.72
COMMD4-224ENST00000568877 RBPJLQ9UBG7 517 aa19.52■□□□□ 0.72
COMMD4-224ENST00000568877 CPA4Q9UI42 421 aa19.52■□□□□ 0.72
COMMD4-224ENST00000568877 PRR12Q9ULL5 1215 aa19.52■□□□□ 0.72
COMMD4-224ENST00000568877 GOLGA8BA8MQT2 603 aa19.51■□□□□ 0.71
COMMD4-224ENST00000568877 KLRF2D3W0D1 207 aa19.51■□□□□ 0.71
COMMD4-224ENST00000568877 VWA5AO00534 786 aa19.51■□□□□ 0.71
COMMD4-224ENST00000568877 SYDE2Q5VT97 1194 aa19.51■□□□□ 0.71
COMMD4-224ENST00000568877 POTEEQ6S8J3 1075 aa19.51■□□□□ 0.71
COMMD4-224ENST00000568877 ANKRD13CQ8N6S4 541 aa19.51■□□□□ 0.71
COMMD4-224ENST00000568877 RABGAP1Q9Y3P9 1069 aa19.51■□□□□ 0.71
COMMD4-224ENST00000568877 GOLGA8AA7E2F4 631 aa19.5■□□□□ 0.71
COMMD4-224ENST00000568877 ZBED4O75132 1171 aa19.5■□□□□ 0.71
COMMD4-224ENST00000568877 HSPA1AP0DMV8 641 aaKnown RBP19.5■□□□□ 0.71
COMMD4-224ENST00000568877 HSPA1BP0DMV9 641 aaKnown RBP19.5■□□□□ 0.71
COMMD4-224ENST00000568877 FDX1P10109 184 aa19.5■□□□□ 0.71
COMMD4-224ENST00000568877 BCRP11274 1271 aa19.5■□□□□ 0.71
COMMD4-224ENST00000568877 PDIA3P30101 505 aaKnown RBP19.5■□□□□ 0.71
COMMD4-224ENST00000568877 METAP2P50579 478 aaKnown RBP eCLIP19.5■□□□□ 0.71
COMMD4-224ENST00000568877 MB21D1Q8N884 522 aa19.5■□□□□ 0.71
COMMD4-224ENST00000568877 IL27Q8NEV9 243 aa19.5■□□□□ 0.71
COMMD4-224ENST00000568877 ZNF274Q96GC6 653 aaPredicted RBP19.5■□□□□ 0.71
COMMD4-224ENST00000568877 PAGR1Q9BTK6 254 aa19.5■□□□□ 0.71
COMMD4-224ENST00000568877 CPVLQ9H3G5 476 aa19.5■□□□□ 0.71
COMMD4-224ENST00000568877 TSKSQ9UJT2 592 aa19.5■□□□□ 0.71
COMMD4-224ENST00000568877 HPS5Q9UPZ3 1129 aa19.5■□□□□ 0.71
COMMD4-224ENST00000568877 CNMDO75829 334 aa19.49■□□□□ 0.71
COMMD4-224ENST00000568877 GNAQP50148 359 aa19.49■□□□□ 0.71
COMMD4-224ENST00000568877 PPP2R5BQ15173 497 aa19.49■□□□□ 0.71
COMMD4-224ENST00000568877 RTN1Q16799 776 aa19.49■□□□□ 0.71
COMMD4-224ENST00000568877 FAM110CQ1W6H9 321 aa19.49■□□□□ 0.71
COMMD4-224ENST00000568877 GPRC5AQ8NFJ5 357 aa19.49■□□□□ 0.71
COMMD4-224ENST00000568877 SLC38A10Q9HBR0 1119 aa19.49■□□□□ 0.71
COMMD4-224ENST00000568877 TXNRD2Q9NNW7 524 aa19.49■□□□□ 0.71
COMMD4-224ENST00000568877 RBM28Q9NW13 759 aaKnown RBP19.49■□□□□ 0.71
COMMD4-224ENST00000568877 BTBD7Q9P203 1132 aa19.49■□□□□ 0.71
COMMD4-224ENST00000568877 MORF4L1Q9UBU8 362 aa19.49■□□□□ 0.71
COMMD4-224ENST00000568877 TPCN1Q9ULQ1 816 aa19.49■□□□□ 0.71
COMMD4-224ENST00000568877 RLFQ13129 1914 aa19.49■□□□□ 0.71
COMMD4-224ENST00000568877 GPR25O00155 361 aa19.48■□□□□ 0.71
COMMD4-224ENST00000568877 ST18O60284 1047 aa19.48■□□□□ 0.71
COMMD4-224ENST00000568877 PEX10O60683 326 aa19.48■□□□□ 0.71
COMMD4-224ENST00000568877 NOM1Q5C9Z4 860 aaKnown RBP19.48■□□□□ 0.71
COMMD4-224ENST00000568877 ADGRF4Q8IZF3 695 aa19.48■□□□□ 0.71
COMMD4-224ENST00000568877 REPS2Q8NFH8 660 aa19.48■□□□□ 0.71
COMMD4-224ENST00000568877 LZTS2Q9BRK4 669 aa19.48■□□□□ 0.71
COMMD4-224ENST00000568877 RANBP17Q9H2T7 1088 aaKnown RBP19.48■□□□□ 0.71
COMMD4-224ENST00000568877 CTDP1Q9Y5B0 961 aaPredicted RBP19.48■□□□□ 0.71
COMMD4-224ENST00000568877 NID2Q14112 1375 aa19.47■□□□□ 0.71
COMMD4-224ENST00000568877 CCDC196A0A1B0GTZ2 297 aa19.47■□□□□ 0.71
COMMD4-224ENST00000568877 FOXN1O15353 648 aa19.47■□□□□ 0.71
COMMD4-224ENST00000568877 PLEKHA8P1O95397 391 aa19.47■□□□□ 0.71
COMMD4-224ENST00000568877 SMARCA1P28370 1054 aa19.47■□□□□ 0.71
COMMD4-224ENST00000568877 SNAP25P60880 206 aa19.47■□□□□ 0.71
COMMD4-224ENST00000568877 ERVK-9P63128 1117 aa19.47■□□□□ 0.71
COMMD4-224ENST00000568877 ERVK-24P63145 666 aa19.47■□□□□ 0.71
COMMD4-224ENST00000568877 TMEM132BQ14DG7 1078 aa19.47■□□□□ 0.71
COMMD4-224ENST00000568877 Q3C1V9 767 aa19.47■□□□□ 0.71
COMMD4-224ENST00000568877 TMTC3Q6ZXV5 915 aa19.47■□□□□ 0.71
COMMD4-224ENST00000568877 NOL8Q76FK4 1167 aaKnown RBP19.47■□□□□ 0.71
COMMD4-224ENST00000568877 NBPF11Q86T75 865 aa19.47■□□□□ 0.71
COMMD4-224ENST00000568877 VAT1LQ9HCJ6 419 aa19.47■□□□□ 0.71
COMMD4-224ENST00000568877 FAM217BQ9NTX9 383 aaPredicted RBP19.47■□□□□ 0.71
COMMD4-224ENST00000568877 PARP14Q460N5 1801 aa19.46■□□□□ 0.71
COMMD4-224ENST00000568877 DHX16O60231 1041 aaKnown RBP19.46■□□□□ 0.71
COMMD4-224ENST00000568877 CDC27P30260 824 aa19.46■□□□□ 0.71
COMMD4-224ENST00000568877 ADD1P35611 737 aaKnown RBP19.46■□□□□ 0.71
COMMD4-224ENST00000568877 CCT2P78371 535 aaKnown RBP19.46■□□□□ 0.71
COMMD4-224ENST00000568877 SP3Q02447 781 aa19.46■□□□□ 0.71
COMMD4-224ENST00000568877 SLC35G1Q2M3R5 365 aa19.46■□□□□ 0.71
COMMD4-224ENST00000568877 CMTR1Q8N1G2 835 aaKnown RBP19.46■□□□□ 0.71
COMMD4-224ENST00000568877 SRBD1Q8N5C6 995 aaKnown RBP19.46■□□□□ 0.71
COMMD4-224ENST00000568877 SPZ1Q9BXG8 430 aa19.46■□□□□ 0.71
COMMD4-224ENST00000568877 SPATC1LQ9H0A9 340 aa19.46■□□□□ 0.71
COMMD4-224ENST00000568877 RIOX1Q9H6W3 641 aa19.46■□□□□ 0.71
COMMD4-224ENST00000568877 JMJD4Q9H9V9 463 aa19.46■□□□□ 0.71
COMMD4-224ENST00000568877 ZNF214Q9UL59 606 aaPredicted RBP19.46■□□□□ 0.71
COMMD4-224ENST00000568877 ATP2A1O14983 1001 aa19.45■□□□□ 0.7
COMMD4-224ENST00000568877 CYTH3O43739 400 aa19.45■□□□□ 0.7
COMMD4-224ENST00000568877 OAZ1P54368 228 aa19.45■□□□□ 0.7
COMMD4-224ENST00000568877 CCNA1P78396 465 aa19.45■□□□□ 0.7
COMMD4-224ENST00000568877 STK3Q13188 491 aa19.45■□□□□ 0.7
COMMD4-224ENST00000568877 PLS1Q14651 629 aa19.45■□□□□ 0.7
COMMD4-224ENST00000568877 CCDC174Q6PII3 467 aa19.45■□□□□ 0.7
COMMD4-224ENST00000568877 CPXCR1Q8N123 301 aa19.45■□□□□ 0.7
COMMD4-224ENST00000568877 RAVER2Q9HCJ3 691 aaKnown RBP19.45■□□□□ 0.7
COMMD4-224ENST00000568877 LIMCH1Q9UPQ0 1083 aa19.45■□□□□ 0.7
COMMD4-224ENST00000568877 A0A0G2JMZ2 1700 aa19.45■□□□□ 0.7
COMMD4-224ENST00000568877 PFKFB2O60825 505 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms