RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 KCNA10Q16322 511 aa17.89■□□□□ 0.45
USB1-214ENST00000568848 SNRNP48Q6IEG0 339 aaKnown RBP17.89■□□□□ 0.45
USB1-214ENST00000568848 CPXCR1Q8N123 301 aa17.89■□□□□ 0.45
USB1-214ENST00000568848 CLASRPQ8N2M8 674 aaKnown RBP17.89■□□□□ 0.45
USB1-214ENST00000568848 FGD4Q96M96 766 aa17.89■□□□□ 0.45
USB1-214ENST00000568848 PPP1R12CQ9BZL4 782 aa17.89■□□□□ 0.45
USB1-214ENST00000568848 STARD7Q9NQZ5 370 aa17.89■□□□□ 0.45
USB1-214ENST00000568848 GREB1LQ9C091 1923 aaPredicted RBP17.89■□□□□ 0.45
USB1-214ENST00000568848 KIF1BPQ96EK5 621 aa17.88■□□□□ 0.45
USB1-214ENST00000568848 RAVER2Q9HCJ3 691 aaKnown RBP17.88■□□□□ 0.45
USB1-214ENST00000568848 COG6Q9Y2V7 657 aa17.88■□□□□ 0.45
USB1-214ENST00000568848 TSHZ3Q63HK5 1081 aa17.87■□□□□ 0.45
USB1-214ENST00000568848 CCSAPQ6IQ19 270 aaPredicted RBP17.87■□□□□ 0.45
USB1-214ENST00000568848 KLHDC9Q8NEP7 349 aa17.87■□□□□ 0.45
USB1-214ENST00000568848 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.87■□□□□ 0.45
USB1-214ENST00000568848 PRDM12Q9H4Q4 367 aa17.87■□□□□ 0.45
USB1-214ENST00000568848 ZNF576Q9H609 170 aa17.87■□□□□ 0.45
USB1-214ENST00000568848 SH2D4AQ9H788 454 aa17.87■□□□□ 0.45
USB1-214ENST00000568848 ATP8A2Q9NTI2 1148 aa17.87■□□□□ 0.45
USB1-214ENST00000568848 PRDM1O75626 825 aa17.86■□□□□ 0.45
USB1-214ENST00000568848 NDUFB10O96000 172 aa17.86■□□□□ 0.45
USB1-214ENST00000568848 CSF2RAP15509 400 aa17.86■□□□□ 0.45
USB1-214ENST00000568848 RASA1P20936 1047 aa17.86■□□□□ 0.45
USB1-214ENST00000568848 BEX3Q00994 111 aa17.86■□□□□ 0.45
USB1-214ENST00000568848 CCDC85BQ15834 202 aaPredicted RBP17.86■□□□□ 0.45
USB1-214ENST00000568848 TIFAQ96CG3 184 aa17.86■□□□□ 0.45
USB1-214ENST00000568848 CCDC17Q96LX7 622 aa17.86■□□□□ 0.45
USB1-214ENST00000568848 SLF1Q9BQI6 1058 aa17.86■□□□□ 0.45
USB1-214ENST00000568848 KANSL2Q9H9L4 492 aa17.86■□□□□ 0.45
USB1-214ENST00000568848 GOPCQ9HD26 462 aa17.86■□□□□ 0.45
USB1-214ENST00000568848 TBX21Q9UL17 535 aa17.86■□□□□ 0.45
USB1-214ENST00000568848 CNPY2Q9Y2B0 182 aa17.86■□□□□ 0.45
USB1-214ENST00000568848 UMODL1Q5DID0 1318 aa17.86■□□□□ 0.45
USB1-214ENST00000568848 ZBED9Q6R2W3 1325 aa17.86■□□□□ 0.45
USB1-214ENST00000568848 CHD7Q9P2D1 2997 aa17.86■□□□□ 0.45
USB1-214ENST00000568848 REV3LO60673 3130 aa17.86■□□□□ 0.45
USB1-214ENST00000568848 GBF1Q92538 1859 aa17.86■□□□□ 0.45
USB1-214ENST00000568848 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.85■□□□□ 0.45
USB1-214ENST00000568848 C6orf222P0C671 652 aaPredicted RBP17.85■□□□□ 0.45
USB1-214ENST00000568848 TMEM63BQ5T3F8 832 aa17.85■□□□□ 0.45
USB1-214ENST00000568848 RASGRP2Q7LDG7 609 aa17.85■□□□□ 0.45
USB1-214ENST00000568848 ANKRD33Q7Z3H0 272 aa17.85■□□□□ 0.45
USB1-214ENST00000568848 LRRC47Q8N1G4 583 aaKnown RBP17.85■□□□□ 0.45
USB1-214ENST00000568848 KIFC2Q96AC6 838 aa17.85■□□□□ 0.45
USB1-214ENST00000568848 ROBO3Q96MS0 1386 aa17.85■□□□□ 0.45
USB1-214ENST00000568848 HAUS7Q99871 368 aa17.85■□□□□ 0.45
USB1-214ENST00000568848 PBX4Q9BYU1 374 aa17.85■□□□□ 0.45
USB1-214ENST00000568848 HOMER2Q9NSB8 354 aa17.85■□□□□ 0.45
USB1-214ENST00000568848 MYH4Q9Y623 1939 aa17.84■□□□□ 0.45
USB1-214ENST00000568848 DNAJC25-GNG10A0A024R161 153 aa17.84■□□□□ 0.45
USB1-214ENST00000568848 MINDY4BA8MYZ0 360 aa17.84■□□□□ 0.45
USB1-214ENST00000568848 TIMP1P01033 207 aa17.84■□□□□ 0.45
USB1-214ENST00000568848 CYP2C18P33260 490 aa17.84■□□□□ 0.45
USB1-214ENST00000568848 SNAP25P60880 206 aa17.84■□□□□ 0.45
USB1-214ENST00000568848 ADGRE1Q14246 886 aa17.84■□□□□ 0.45
USB1-214ENST00000568848 TMEM240Q5SV17 173 aa17.84■□□□□ 0.45
USB1-214ENST00000568848 CCDC129Q6ZRS4 1044 aa17.84■□□□□ 0.45
USB1-214ENST00000568848 MIER1Q8N108 512 aa17.84■□□□□ 0.45
USB1-214ENST00000568848 VTI1AQ96AJ9 217 aa17.84■□□□□ 0.45
USB1-214ENST00000568848 DDX11Q96FC9 970 aa17.84■□□□□ 0.45
USB1-214ENST00000568848 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.84■□□□□ 0.45
USB1-214ENST00000568848 CXXC1Q9P0U4 656 aaPredicted RBP17.84■□□□□ 0.45
USB1-214ENST00000568848 NRBP1Q9UHY1 535 aa17.84■□□□□ 0.45
USB1-214ENST00000568848 DIS3Q9Y2L1 958 aaKnown RBP17.84■□□□□ 0.45
USB1-214ENST00000568848 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.83■□□□□ 0.44
USB1-214ENST00000568848 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.83■□□□□ 0.44
USB1-214ENST00000568848 DCDC2CA8MYV0 355 aa17.83■□□□□ 0.44
USB1-214ENST00000568848 F5H6K3 240 aa17.83■□□□□ 0.44
USB1-214ENST00000568848 CTAGE5O15320 804 aa17.83■□□□□ 0.44
USB1-214ENST00000568848 ASGR1P07306 291 aa17.83■□□□□ 0.44
USB1-214ENST00000568848 ATP5JP18859 108 aa17.83■□□□□ 0.44
USB1-214ENST00000568848 CNTN2Q02246 1040 aa17.83■□□□□ 0.44
USB1-214ENST00000568848 KLRC3Q07444 240 aa17.83■□□□□ 0.44
USB1-214ENST00000568848 CCDC144BQ3MJ40 725 aa17.83■□□□□ 0.44
USB1-214ENST00000568848 HSP90AB4PQ58FF6 505 aa17.83■□□□□ 0.44
USB1-214ENST00000568848 DIEXFQ68CQ4 756 aaKnown RBP17.83■□□□□ 0.44
USB1-214ENST00000568848 TMED8Q6PL24 325 aaPredicted RBP17.83■□□□□ 0.44
USB1-214ENST00000568848 ZNF365Q70YC5 407 aa17.83■□□□□ 0.44
USB1-214ENST00000568848 TEX13BQ9BXU2 312 aa17.83■□□□□ 0.44
USB1-214ENST00000568848 EPB41L4AQ9HCS5 686 aaPredicted RBP17.83■□□□□ 0.44
USB1-214ENST00000568848 CLIP2Q9UDT6 1046 aa17.83■□□□□ 0.44
USB1-214ENST00000568848 FAM184BQ9ULE4 1060 aa17.83■□□□□ 0.44
USB1-214ENST00000568848 ASTN1O14525 1302 aa17.82■□□□□ 0.44
USB1-214ENST00000568848 GSG1L2A8MUP6 293 aa17.82■□□□□ 0.44
USB1-214ENST00000568848 ACVR2BQ13705 512 aa17.82■□□□□ 0.44
USB1-214ENST00000568848 PPP1R13LQ8WUF5 828 aa17.82■□□□□ 0.44
USB1-214ENST00000568848 CDK7P50613 346 aa17.81■□□□□ 0.44
USB1-214ENST00000568848 UBE3CQ15386 1083 aa17.81■□□□□ 0.44
USB1-214ENST00000568848 MFSD5Q6N075 450 aa17.81■□□□□ 0.44
USB1-214ENST00000568848 ARMCX2Q7L311 632 aa17.81■□□□□ 0.44
USB1-214ENST00000568848 AMOTL1Q8IY63 956 aa17.81■□□□□ 0.44
USB1-214ENST00000568848 OSBP2Q969R2 916 aa17.81■□□□□ 0.44
USB1-214ENST00000568848 TOX2Q96NM4 488 aa17.81■□□□□ 0.44
USB1-214ENST00000568848 NECAB3Q96P71 396 aaPredicted RBP17.81■□□□□ 0.44
USB1-214ENST00000568848 PURBQ96QR8 312 aaKnown RBP17.81■□□□□ 0.44
USB1-214ENST00000568848 STRBPQ96SI9 672 aaKnown RBP17.81■□□□□ 0.44
USB1-214ENST00000568848 TSEN34Q9BSV6 310 aaKnown RBP17.81■□□□□ 0.44
USB1-214ENST00000568848 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.81■□□□□ 0.44
USB1-214ENST00000568848 KATNBL1Q9H079 304 aa17.81■□□□□ 0.44
USB1-214ENST00000568848 NKX2-4Q9H2Z4 354 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms