RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 ZFYP08048 801 aaPredicted RBP18■□□□□ 0.47
COMMD4-223ENST00000568301 CLTBP09497 229 aa18■□□□□ 0.47
COMMD4-223ENST00000568301 RARBP10826 455 aa18■□□□□ 0.47
COMMD4-223ENST00000568301 KLRC3Q07444 240 aa18■□□□□ 0.47
COMMD4-223ENST00000568301 APPBP2Q92624 585 aa18■□□□□ 0.47
COMMD4-223ENST00000568301 OSBP2Q969R2 916 aa18■□□□□ 0.47
COMMD4-223ENST00000568301 GPATCH3Q96I76 525 aa18■□□□□ 0.47
COMMD4-223ENST00000568301 MINDY4BA8MYZ0 360 aa17.99■□□□□ 0.47
COMMD4-223ENST00000568301 RNF113AO15541 343 aaKnown RBP17.99■□□□□ 0.47
COMMD4-223ENST00000568301 PQBP1O60828 265 aaKnown RBP17.99■□□□□ 0.47
COMMD4-223ENST00000568301 FOSL2P15408 326 aa17.99■□□□□ 0.47
COMMD4-223ENST00000568301 GNAT2P19087 354 aa17.99■□□□□ 0.47
COMMD4-223ENST00000568301 RNF180Q86T96 592 aa17.99■□□□□ 0.47
COMMD4-223ENST00000568301 MSL3Q8N5Y2 521 aaKnown RBP17.99■□□□□ 0.47
COMMD4-223ENST00000568301 PRPF38AQ8NAV1 312 aaKnown RBP17.99■□□□□ 0.47
COMMD4-223ENST00000568301 LENG1Q96BZ8 264 aaPredicted RBP17.99■□□□□ 0.47
COMMD4-223ENST00000568301 RNPC3Q96LT9 517 aaKnown RBP17.99■□□□□ 0.47
COMMD4-223ENST00000568301 SLF1Q9BQI6 1058 aa17.99■□□□□ 0.47
COMMD4-223ENST00000568301 TEX13BQ9BXU2 312 aa17.99■□□□□ 0.47
COMMD4-223ENST00000568301 ZNF287Q9HBT7 754 aa17.99■□□□□ 0.47
COMMD4-223ENST00000568301 ROBO3Q96MS0 1386 aa17.99■□□□□ 0.47
COMMD4-223ENST00000568301 MYH4Q9Y623 1939 aa17.98■□□□□ 0.47
COMMD4-223ENST00000568301 A0A1W2PQ45 241 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-223ENST00000568301 A0A1W2PQY0 241 aa17.98■□□□□ 0.47
COMMD4-223ENST00000568301 ATP2A1O14983 1001 aa17.98■□□□□ 0.47
COMMD4-223ENST00000568301 KIAA0355O15063 1070 aa17.98■□□□□ 0.47
COMMD4-223ENST00000568301 ZNF865P0CJ78 1059 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-223ENST00000568301 RAG1P15918 1043 aa17.98■□□□□ 0.47
COMMD4-223ENST00000568301 MKL1Q969V6 931 aa17.98■□□□□ 0.47
COMMD4-223ENST00000568301 SYNPO2Q9UMS6 1093 aa17.98■□□□□ 0.47
COMMD4-223ENST00000568301 CNPY2Q9Y2B0 182 aa17.98■□□□□ 0.47
COMMD4-223ENST00000568301 TTC28Q96AY4 2481 aa17.98■□□□□ 0.47
COMMD4-223ENST00000568301 CHD9Q3L8U1 2897 aa17.97■□□□□ 0.47
COMMD4-223ENST00000568301 IGKV6D-41A0A0C4DH26 115 aa17.97■□□□□ 0.47
COMMD4-223ENST00000568301 NDUFB10O96000 172 aa17.97■□□□□ 0.47
COMMD4-223ENST00000568301 AKR1A1P14550 325 aa17.97■□□□□ 0.47
COMMD4-223ENST00000568301 ZNF444Q8N0Y2 327 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-223ENST00000568301 NUP88Q99567 741 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-223ENST00000568301 DNAJC25-GNG10A0A024R161 153 aa17.96■□□□□ 0.47
COMMD4-223ENST00000568301 GPAA1O43292 621 aa17.96■□□□□ 0.47
COMMD4-223ENST00000568301 FAAP100Q0VG06 881 aa17.96■□□□□ 0.47
COMMD4-223ENST00000568301 LRRFIP1Q32MZ4 808 aaKnown RBP17.96■□□□□ 0.47
COMMD4-223ENST00000568301 SNRNP48Q6IEG0 339 aaKnown RBP17.96■□□□□ 0.47
COMMD4-223ENST00000568301 MAMDC4Q6UXC1 1216 aa17.96■□□□□ 0.47
COMMD4-223ENST00000568301 DDX11Q96FC9 970 aa17.96■□□□□ 0.47
COMMD4-223ENST00000568301 TSEN34Q9BSV6 310 aaKnown RBP17.96■□□□□ 0.47
COMMD4-223ENST00000568301 TMEM39AQ9NV64 488 aa17.96■□□□□ 0.47
COMMD4-223ENST00000568301 CLIP2Q9UDT6 1046 aa17.96■□□□□ 0.47
COMMD4-223ENST00000568301 RIPK3Q9Y572 518 aa17.96■□□□□ 0.47
COMMD4-223ENST00000568301 SYNGAP1Q96PV0 1343 aa17.96■□□□□ 0.46
COMMD4-223ENST00000568301 PATL2C9JE40 543 aaKnown RBP17.95■□□□□ 0.46
COMMD4-223ENST00000568301 ZBED4O75132 1171 aa17.95■□□□□ 0.46
COMMD4-223ENST00000568301 ADAMTS4O75173 837 aa17.95■□□□□ 0.46
COMMD4-223ENST00000568301 APPP05067 770 aa17.95■□□□□ 0.46
COMMD4-223ENST00000568301 TDO2P48775 406 aa17.95■□□□□ 0.46
COMMD4-223ENST00000568301 FPGSQ05932 587 aa17.95■□□□□ 0.46
COMMD4-223ENST00000568301 GRIN2CQ14957 1233 aa17.95■□□□□ 0.46
COMMD4-223ENST00000568301 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.95■□□□□ 0.46
COMMD4-223ENST00000568301 ZNF467Q7Z7K2 595 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-223ENST00000568301 STK11IPQ8N1F8 1099 aa17.95■□□□□ 0.46
COMMD4-223ENST00000568301 EPB41L4AQ9HCS5 686 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-223ENST00000568301 PRDM6Q9NQX0 595 aa17.95■□□□□ 0.46
COMMD4-223ENST00000568301 TMEM265A0A087WTH1 108 aa17.94■□□□□ 0.46
COMMD4-223ENST00000568301 SNAI1O95863 264 aaPredicted RBP17.94■□□□□ 0.46
COMMD4-223ENST00000568301 ANKRD33Q7Z3H0 272 aa17.94■□□□□ 0.46
COMMD4-223ENST00000568301 IFNL3Q8IZI9 196 aa17.94■□□□□ 0.46
COMMD4-223ENST00000568301 CEP95Q96GE4 821 aa17.94■□□□□ 0.46
COMMD4-223ENST00000568301 MTMR4Q9NYA4 1195 aa17.94■□□□□ 0.46
COMMD4-223ENST00000568301 FEM1BQ9UK73 627 aa17.94■□□□□ 0.46
COMMD4-223ENST00000568301 FAM184BQ9ULE4 1060 aa17.94■□□□□ 0.46
COMMD4-223ENST00000568301 TTLL1O95922 423 aa17.93■□□□□ 0.46
COMMD4-223ENST00000568301 DNAJB2P25686 324 aa17.93■□□□□ 0.46
COMMD4-223ENST00000568301 ACLYP53396 1101 aa17.93■□□□□ 0.46
COMMD4-223ENST00000568301 OAZ1P54368 228 aa17.93■□□□□ 0.46
COMMD4-223ENST00000568301 TSHZ3Q63HK5 1081 aa17.93■□□□□ 0.46
COMMD4-223ENST00000568301 CPXCR1Q8N123 301 aa17.93■□□□□ 0.46
COMMD4-223ENST00000568301 USP38Q8NB14 1042 aa17.93■□□□□ 0.46
COMMD4-223ENST00000568301 GMCL1P1Q8NEA9 526 aa17.93■□□□□ 0.46
COMMD4-223ENST00000568301 TOX2Q96NM4 488 aa17.93■□□□□ 0.46
COMMD4-223ENST00000568301 NACAP1Q9BZK3 213 aa17.93■□□□□ 0.46
COMMD4-223ENST00000568301 SLC38A10Q9HBR0 1119 aa17.93■□□□□ 0.46
COMMD4-223ENST00000568301 STARD7Q9NQZ5 370 aa17.93■□□□□ 0.46
COMMD4-223ENST00000568301 FBXO40Q9UH90 709 aa17.93■□□□□ 0.46
COMMD4-223ENST00000568301 CTDP1Q9Y5B0 961 aaPredicted RBP17.93■□□□□ 0.46
COMMD4-223ENST00000568301 TTC41PQ6P2S7 1318 aa17.93■□□□□ 0.46
COMMD4-223ENST00000568301 SYNRGQ9UMZ2 1314 aa17.93■□□□□ 0.46
COMMD4-223ENST00000568301 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-223ENST00000568301 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-223ENST00000568301 DCDC2CA8MYV0 355 aa17.92■□□□□ 0.46
COMMD4-223ENST00000568301 M0R2C6 588 aa17.92■□□□□ 0.46
COMMD4-223ENST00000568301 DUSP11O75319 330 aaKnown RBP17.92■□□□□ 0.46
COMMD4-223ENST00000568301 FDX1P10109 184 aa17.92■□□□□ 0.46
COMMD4-223ENST00000568301 PDE4BQ07343 736 aa17.92■□□□□ 0.46
COMMD4-223ENST00000568301 KCNA10Q16322 511 aa17.92■□□□□ 0.46
COMMD4-223ENST00000568301 KLHDC9Q8NEP7 349 aa17.92■□□□□ 0.46
COMMD4-223ENST00000568301 CHST13Q8NET6 341 aa17.92■□□□□ 0.46
COMMD4-223ENST00000568301 NEDD1Q8NHV4 660 aa17.92■□□□□ 0.46
COMMD4-223ENST00000568301 NUP133Q8WUM0 1156 aa17.92■□□□□ 0.46
COMMD4-223ENST00000568301 KIFC2Q96AC6 838 aa17.92■□□□□ 0.46
COMMD4-223ENST00000568301 REV3LO60673 3130 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms