RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 NFIAQ12857 509 aa26.5■■□□□ 1.83
LINC00543-201ENST00000567234 RRP36Q96EU6 259 aaKnown RBP26.5■■□□□ 1.83
LINC00543-201ENST00000567234 PSMD1Q99460 953 aa26.5■■□□□ 1.83
LINC00543-201ENST00000567234 SIPA1L1O43166 1804 aa26.49■■□□□ 1.83
LINC00543-201ENST00000567234 USP17L2Q6R6M4 530 aa26.49■■□□□ 1.83
LINC00543-201ENST00000567234 METTL16Q86W50 562 aaKnown RBP26.49■■□□□ 1.83
LINC00543-201ENST00000567234 RIOX1Q9H6W3 641 aa26.49■■□□□ 1.83
LINC00543-201ENST00000567234 MYH4Q9Y623 1939 aa26.49■■□□□ 1.83
LINC00543-201ENST00000567234 hCG_1984214I3L0E3 225 aa26.49■■□□□ 1.83
LINC00543-201ENST00000567234 GOLGA8HP0CJ92 632 aa26.49■■□□□ 1.83
LINC00543-201ENST00000567234 PDHBP11177 359 aa26.49■■□□□ 1.83
LINC00543-201ENST00000567234 ZNF75DP51815 510 aa26.49■■□□□ 1.83
LINC00543-201ENST00000567234 MDM2Q00987 491 aaPredicted RBP26.49■■□□□ 1.83
LINC00543-201ENST00000567234 DPCR1Q3MIW9 517 aa26.49■■□□□ 1.83
LINC00543-201ENST00000567234 NOM1Q5C9Z4 860 aaKnown RBP26.49■■□□□ 1.83
LINC00543-201ENST00000567234 ZNF713Q8N859 430 aaPredicted RBP26.49■■□□□ 1.83
LINC00543-201ENST00000567234 TRIM5Q9C035 493 aa26.49■■□□□ 1.83
LINC00543-201ENST00000567234 CDC25BP30305 580 aa26.48■■□□□ 1.83
LINC00543-201ENST00000567234 ZNF174Q15697 407 aa26.48■■□□□ 1.83
LINC00543-201ENST00000567234 SPECC1Q5M775 1068 aa26.48■■□□□ 1.83
LINC00543-201ENST00000567234 TYW1BQ6NUM6 668 aa26.48■■□□□ 1.83
LINC00543-201ENST00000567234 HEATR3Q7Z4Q2 680 aa26.48■■□□□ 1.83
LINC00543-201ENST00000567234 CCDC34Q96HJ3 373 aa26.48■■□□□ 1.83
LINC00543-201ENST00000567234 ZMYND12Q9H0C1 365 aa26.48■■□□□ 1.83
LINC00543-201ENST00000567234 PRDM10Q9NQV6 1147 aa26.48■■□□□ 1.83
LINC00543-201ENST00000567234 ZHX1Q9UKY1 873 aaPredicted RBP26.48■■□□□ 1.83
LINC00543-201ENST00000567234 MTMR7Q9Y216 660 aa26.48■■□□□ 1.83
LINC00543-201ENST00000567234 ARFGEF1Q9Y6D6 1849 aa26.47■■□□□ 1.83
LINC00543-201ENST00000567234 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.47■■□□□ 1.83
LINC00543-201ENST00000567234 POLR2DO15514 142 aaKnown RBP26.47■■□□□ 1.83
LINC00543-201ENST00000567234 PTGDRQ13258 359 aa26.47■■□□□ 1.83
LINC00543-201ENST00000567234 ARL6IP4Q66PJ3 421 aaKnown RBP26.47■■□□□ 1.83
LINC00543-201ENST00000567234 PI4KBQ9UBF8 816 aa26.47■■□□□ 1.83
LINC00543-201ENST00000567234 SEC63Q9UGP8 760 aaKnown RBP26.47■■□□□ 1.83
LINC00543-201ENST00000567234 YDJCA8MPS7 323 aa26.46■■□□□ 1.83
LINC00543-201ENST00000567234 USP17L5A8MUK1 530 aa26.46■■□□□ 1.83
LINC00543-201ENST00000567234 WNT7AO00755 349 aa26.46■■□□□ 1.83
LINC00543-201ENST00000567234 RBM5P52756 815 aaKnown RBP eCLIP26.46■■□□□ 1.83
LINC00543-201ENST00000567234 SOGA3Q5TF21 947 aa26.46■■□□□ 1.83
LINC00543-201ENST00000567234 CREBRFQ8IUR6 639 aa26.46■■□□□ 1.83
LINC00543-201ENST00000567234 VPS33BQ9H267 617 aa26.46■■□□□ 1.83
LINC00543-201ENST00000567234 CCDC194A0A1B0GVG4 234 aa26.46■■□□□ 1.83
LINC00543-201ENST00000567234 NFKBIEO00221 500 aa26.46■■□□□ 1.83
LINC00543-201ENST00000567234 PNOCQ13519 176 aa26.46■■□□□ 1.83
LINC00543-201ENST00000567234 FAM198AQ9UFP1 575 aa26.46■■□□□ 1.83
LINC00543-201ENST00000567234 PCDHA6Q9UN73 950 aa26.46■■□□□ 1.83
LINC00543-201ENST00000567234 PCDHA8Q9Y5H6 950 aa26.46■■□□□ 1.83
LINC00543-201ENST00000567234 COL2A1P02458 1487 aaPredicted RBP26.46■■□□□ 1.83
LINC00543-201ENST00000567234 A0A087WWV3 80 aa26.45■■□□□ 1.82
LINC00543-201ENST00000567234 SMTNL1A8MU46 457 aa26.45■■□□□ 1.82
LINC00543-201ENST00000567234 NT5DC1Q5TFE4 455 aa26.45■■□□□ 1.82
LINC00543-201ENST00000567234 FOXP4Q8IVH2 680 aaPredicted RBP26.45■■□□□ 1.82
LINC00543-201ENST00000567234 AOPEPQ8N6M6 819 aa26.45■■□□□ 1.82
LINC00543-201ENST00000567234 TTC12Q9H892 705 aaPredicted RBP26.45■■□□□ 1.82
LINC00543-201ENST00000567234 CLIP2Q9UDT6 1046 aa26.45■■□□□ 1.82
LINC00543-201ENST00000567234 ESYT2A0FGR8 921 aa26.44■■□□□ 1.82
LINC00543-201ENST00000567234 GNA11P29992 359 aa26.44■■□□□ 1.82
LINC00543-201ENST00000567234 CBX1P83916 185 aa26.44■■□□□ 1.82
LINC00543-201ENST00000567234 POSTNQ15063 836 aa26.44■■□□□ 1.82
LINC00543-201ENST00000567234 MRFAP1L1Q96HT8 127 aa26.44■■□□□ 1.82
LINC00543-201ENST00000567234 PYM1Q9BRP8 204 aaKnown RBP26.44■■□□□ 1.82
LINC00543-201ENST00000567234 BIN1O00499 593 aa26.44■■□□□ 1.82
LINC00543-201ENST00000567234 IKBKBO14920 756 aa26.44■■□□□ 1.82
LINC00543-201ENST00000567234 ADAMTS3O15072 1205 aa26.44■■□□□ 1.82
LINC00543-201ENST00000567234 ACTN4O43707 911 aaKnown RBP26.44■■□□□ 1.82
LINC00543-201ENST00000567234 ENTPD3O75355 529 aa26.44■■□□□ 1.82
LINC00543-201ENST00000567234 ZFPM1Q8IX07 1006 aa26.44■■□□□ 1.82
LINC00543-201ENST00000567234 LARGE2Q8N3Y3 721 aa26.44■■□□□ 1.82
LINC00543-201ENST00000567234 C6orf50Q9HD87 102 aa26.44■■□□□ 1.82
LINC00543-201ENST00000567234 SERTAD1Q9UHV2 236 aa26.44■■□□□ 1.82
LINC00543-201ENST00000567234 PCDHA5Q9Y5H7 936 aa26.44■■□□□ 1.82
LINC00543-201ENST00000567234 NAPAP54920 295 aa26.43■■□□□ 1.82
LINC00543-201ENST00000567234 RASGRP2Q7LDG7 609 aa26.43■■□□□ 1.82
LINC00543-201ENST00000567234 ATRNL1Q5VV63 1379 aa26.42■■□□□ 1.82
LINC00543-201ENST00000567234 TPM4P67936 248 aa26.42■■□□□ 1.82
LINC00543-201ENST00000567234 GPATCH4Q5T3I0 446 aaKnown RBP26.42■■□□□ 1.82
LINC00543-201ENST00000567234 USP49Q70CQ1 688 aa26.42■■□□□ 1.82
LINC00543-201ENST00000567234 KRT25Q7Z3Z0 450 aa26.42■■□□□ 1.82
LINC00543-201ENST00000567234 LRRC47Q8N1G4 583 aaKnown RBP26.42■■□□□ 1.82
LINC00543-201ENST00000567234 TRIML1Q8N9V2 468 aa26.42■■□□□ 1.82
LINC00543-201ENST00000567234 TAOK3Q9H2K8 898 aa26.42■■□□□ 1.82
LINC00543-201ENST00000567234 CGNQ9P2M7 1197 aaKnown RBP26.42■■□□□ 1.82
LINC00543-201ENST00000567234 PAXBP1Q9Y5B6 917 aa26.42■■□□□ 1.82
LINC00543-201ENST00000567234 PCDHAC2Q9Y5I4 1007 aa26.42■■□□□ 1.82
LINC00543-201ENST00000567234 MCM7P33993 719 aa26.42■■□□□ 1.82
LINC00543-201ENST00000567234 SARSP49591 514 aaKnown RBP26.42■■□□□ 1.82
LINC00543-201ENST00000567234 RASSF7Q02833 373 aa26.42■■□□□ 1.82
LINC00543-201ENST00000567234 ZNF543Q08ER8 600 aa26.42■■□□□ 1.82
LINC00543-201ENST00000567234 C4orf32Q8N8J7 132 aa26.42■■□□□ 1.82
LINC00543-201ENST00000567234 SYMPKQ92797 1274 aaKnown RBP26.42■■□□□ 1.82
LINC00543-201ENST00000567234 DNAJC18Q9H819 358 aa26.42■■□□□ 1.82
LINC00543-201ENST00000567234 DDTLA6NHG4 134 aaPredicted RBP26.41■■□□□ 1.82
LINC00543-201ENST00000567234 LAD1O00515 517 aa26.41■■□□□ 1.82
LINC00543-201ENST00000567234 RIOK3O14730 519 aaKnown RBP26.41■■□□□ 1.82
LINC00543-201ENST00000567234 SLFN14P0C7P3 912 aa26.41■■□□□ 1.82
LINC00543-201ENST00000567234 CFAP100Q494V2 611 aa26.41■■□□□ 1.82
LINC00543-201ENST00000567234 TATDN1Q6P1N9 297 aa26.41■■□□□ 1.82
LINC00543-201ENST00000567234 MKL1Q969V6 931 aa26.41■■□□□ 1.82
LINC00543-201ENST00000567234 PIGSQ96S52 555 aa26.41■■□□□ 1.82
LINC00543-201ENST00000567234 SYT17Q9BSW7 474 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms