RNA–Protein interactions for RNA: ENST00000566901.5

CFDP1-207, Transcript of craniofacial development protein 1, humanhuman

TSL 1 (best)

Gene CFDP1, Length 1,167 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-207ENST00000566901 NFKBIBQ15653 356 aa14.45□□□□□ -0.1
CFDP1-207ENST00000566901 PFKFB3Q16875 520 aaPredicted RBP14.45□□□□□ -0.1
CFDP1-207ENST00000566901 SLFN13Q68D06 897 aa14.45□□□□□ -0.1
CFDP1-207ENST00000566901 ATL3Q6DD88 541 aa14.45□□□□□ -0.1
CFDP1-207ENST00000566901 USP17L2Q6R6M4 530 aa14.45□□□□□ -0.1
CFDP1-207ENST00000566901 BRAPQ7Z569 592 aa14.45□□□□□ -0.1
CFDP1-207ENST00000566901 SCYL3Q8IZE3 742 aa14.45□□□□□ -0.1
CFDP1-207ENST00000566901 GOPCQ9HD26 462 aa14.45□□□□□ -0.1
CFDP1-207ENST00000566901 SH3GLB2Q9NR46 395 aa14.45□□□□□ -0.1
CFDP1-207ENST00000566901 A0A1W2PRG0 241 aa14.44□□□□□ -0.1
CFDP1-207ENST00000566901 F5H6K3 240 aa14.44□□□□□ -0.1
CFDP1-207ENST00000566901 CYTH3O43739 400 aa14.44□□□□□ -0.1
CFDP1-207ENST00000566901 PLA2G6O60733 806 aa14.44□□□□□ -0.1
CFDP1-207ENST00000566901 DTNBO60941 627 aa14.44□□□□□ -0.1
CFDP1-207ENST00000566901 TRPA1O75762 1119 aa14.44□□□□□ -0.1
CFDP1-207ENST00000566901 NDUFB10O96000 172 aa14.44□□□□□ -0.1
CFDP1-207ENST00000566901 MCM4P33991 863 aa14.44□□□□□ -0.1
CFDP1-207ENST00000566901 KLRC3Q07444 240 aa14.44□□□□□ -0.1
CFDP1-207ENST00000566901 SLC35G1Q2M3R5 365 aa14.44□□□□□ -0.1
CFDP1-207ENST00000566901 KRT40Q6A162 431 aa14.44□□□□□ -0.1
CFDP1-207ENST00000566901 BTNL9Q6UXG8 535 aa14.44□□□□□ -0.1
CFDP1-207ENST00000566901 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.44□□□□□ -0.1
CFDP1-207ENST00000566901 MTMR8Q96EF0 704 aa14.44□□□□□ -0.1
CFDP1-207ENST00000566901 CDCA5Q96FF9 252 aa14.44□□□□□ -0.1
CFDP1-207ENST00000566901 WDR18Q9BV38 432 aa14.44□□□□□ -0.1
CFDP1-207ENST00000566901 KIAA1683Q9H0B3 1180 aa14.44□□□□□ -0.1
CFDP1-207ENST00000566901 VCPKMTQ9H867 229 aa14.44□□□□□ -0.1
CFDP1-207ENST00000566901 SCAF8Q9UPN6 1271 aaKnown RBP14.44□□□□□ -0.1
CFDP1-207ENST00000566901 V9GY48 417 aaPredicted RBP14.44□□□□□ -0.1
CFDP1-207ENST00000566901 MMP1P03956 469 aa14.43□□□□□ -0.1
CFDP1-207ENST00000566901 NF2P35240 595 aa14.43□□□□□ -0.1
CFDP1-207ENST00000566901 SLC1A4P43007 532 aa14.43□□□□□ -0.1
CFDP1-207ENST00000566901 SAFBQ15424 915 aaKnown RBP eCLIP14.43□□□□□ -0.1
CFDP1-207ENST00000566901 CCDC96Q2M329 555 aa14.43□□□□□ -0.1
CFDP1-207ENST00000566901 CMTR1Q8N1G2 835 aaKnown RBP14.43□□□□□ -0.1
CFDP1-207ENST00000566901 CCDC82Q8N4S0 544 aa14.43□□□□□ -0.1
CFDP1-207ENST00000566901 TMEM87AQ8NBN3 555 aa14.43□□□□□ -0.1
CFDP1-207ENST00000566901 CCDC148Q8NFR7 591 aa14.43□□□□□ -0.1
CFDP1-207ENST00000566901 LPAR1Q92633 364 aa14.43□□□□□ -0.1
CFDP1-207ENST00000566901 RRP36Q96EU6 259 aaKnown RBP14.43□□□□□ -0.1
CFDP1-207ENST00000566901 WRNIP1Q96S55 665 aa14.43□□□□□ -0.1
CFDP1-207ENST00000566901 AS3MTQ9HBK9 375 aa14.43□□□□□ -0.1
CFDP1-207ENST00000566901 MYH15Q9Y2K3 1946 aa14.43□□□□□ -0.1
CFDP1-207ENST00000566901 FAM155AB1AL88 458 aaPredicted RBP14.42□□□□□ -0.1
CFDP1-207ENST00000566901 PPP1R12BO60237 982 aaPredicted RBP14.42□□□□□ -0.1
CFDP1-207ENST00000566901 PPFIA3O75145 1194 aa14.42□□□□□ -0.1
CFDP1-207ENST00000566901 GOLGA8HP0CJ92 632 aa14.42□□□□□ -0.1
CFDP1-207ENST00000566901 BMP3P12645 472 aa14.42□□□□□ -0.1
CFDP1-207ENST00000566901 U2AF2P26368 475 aaKnown RBP eCLIP14.42□□□□□ -0.1
CFDP1-207ENST00000566901 CALML3P27482 149 aa14.42□□□□□ -0.1
CFDP1-207ENST00000566901 INPP5BP32019 993 aa14.42□□□□□ -0.1
CFDP1-207ENST00000566901 SOX10P56693 466 aa14.42□□□□□ -0.1
CFDP1-207ENST00000566901 TTLL12Q14166 644 aaPredicted RBP14.42□□□□□ -0.1
CFDP1-207ENST00000566901 MAP3K11Q16584 847 aa14.42□□□□□ -0.1
CFDP1-207ENST00000566901 CSPP1Q1MSJ5 1256 aa14.42□□□□□ -0.1
CFDP1-207ENST00000566901 GALNT17Q6IS24 598 aa14.42□□□□□ -0.1
CFDP1-207ENST00000566901 PPP1R18Q6NYC8 613 aa14.42□□□□□ -0.1
CFDP1-207ENST00000566901 RASGRP2Q7LDG7 609 aa14.42□□□□□ -0.1
CFDP1-207ENST00000566901 ACER1Q8TDN7 264 aa14.42□□□□□ -0.1
CFDP1-207ENST00000566901 CCDC12Q8WUD4 166 aaPredicted RBP14.42□□□□□ -0.1
CFDP1-207ENST00000566901 AIFM3Q96NN9 605 aa14.42□□□□□ -0.1
CFDP1-207ENST00000566901 PHF20Q9BVI0 1012 aa14.42□□□□□ -0.1
CFDP1-207ENST00000566901 FOXP1Q9H334 677 aaPredicted RBP14.42□□□□□ -0.1
CFDP1-207ENST00000566901 PICK1Q9NRD5 415 aa14.42□□□□□ -0.1
CFDP1-207ENST00000566901 SAGE1Q9NXZ1 904 aa14.42□□□□□ -0.1
CFDP1-207ENST00000566901 BARHL2Q9NY43 387 aa14.42□□□□□ -0.1
CFDP1-207ENST00000566901 SEC63Q9UGP8 760 aaKnown RBP14.42□□□□□ -0.1
CFDP1-207ENST00000566901 ESYT2A0FGR8 921 aa14.41□□□□□ -0.1
CFDP1-207ENST00000566901 UNCXA6NJT0 531 aa14.41□□□□□ -0.1
CFDP1-207ENST00000566901 SLC10A3P09131 477 aa14.41□□□□□ -0.1
CFDP1-207ENST00000566901 IREB2P48200 963 aaKnown RBP14.41□□□□□ -0.1
CFDP1-207ENST00000566901 USP14P54578 494 aa14.41□□□□□ -0.1
CFDP1-207ENST00000566901 FOXD4L5Q5VV16 416 aaPredicted RBP14.41□□□□□ -0.1
CFDP1-207ENST00000566901 FERMT3Q86UX7 667 aa14.41□□□□□ -0.1
CFDP1-207ENST00000566901 TEX2Q8IWB9 1127 aa14.41□□□□□ -0.1
CFDP1-207ENST00000566901 FOXD4L4Q8WXT5 416 aaPredicted RBP14.41□□□□□ -0.1
CFDP1-207ENST00000566901 BRMS1Q9HCU9 246 aa14.41□□□□□ -0.1
CFDP1-207ENST00000566901 RNF186Q9NXI6 227 aa14.41□□□□□ -0.1
CFDP1-207ENST00000566901 MTMR7Q9Y216 660 aa14.41□□□□□ -0.1
CFDP1-207ENST00000566901 OTOFQ9HC10 1997 aa14.41□□□□□ -0.1
CFDP1-207ENST00000566901 PHIPQ8WWQ0 1821 aa14.41□□□□□ -0.1
CFDP1-207ENST00000566901 FRMPD2Q68DX3 1309 aaPredicted RBP14.41□□□□□ -0.1
CFDP1-207ENST00000566901 UBE2Q2LH0YL09 131 aa14.4□□□□□ -0.1
CFDP1-207ENST00000566901 WDR46O15213 610 aaKnown RBP14.4□□□□□ -0.1
CFDP1-207ENST00000566901 USP2O75604 605 aaPredicted RBP14.4□□□□□ -0.1
CFDP1-207ENST00000566901 SLC34A2O95436 690 aa14.4□□□□□ -0.1
CFDP1-207ENST00000566901 PTPRAP18433 802 aa14.4□□□□□ -0.1
CFDP1-207ENST00000566901 RGS19P49795 217 aa14.4□□□□□ -0.1
CFDP1-207ENST00000566901 KRT85P78386 507 aa14.4□□□□□ -0.1
CFDP1-207ENST00000566901 MAP3K9P80192 1104 aa14.4□□□□□ -0.1
CFDP1-207ENST00000566901 GUCY1B3Q02153 619 aa14.4□□□□□ -0.1
CFDP1-207ENST00000566901 FAM160B2Q86V87 743 aa14.4□□□□□ -0.1
CFDP1-207ENST00000566901 DAGLBQ8NCG7 672 aa14.4□□□□□ -0.1
CFDP1-207ENST00000566901 C12orf42Q96LP6 360 aa14.4□□□□□ -0.1
CFDP1-207ENST00000566901 ZNF396Q96N95 335 aaPredicted RBP14.4□□□□□ -0.1
CFDP1-207ENST00000566901 FEZ1Q99689 392 aa14.4□□□□□ -0.1
CFDP1-207ENST00000566901 JMJD4Q9H9V9 463 aa14.4□□□□□ -0.1
CFDP1-207ENST00000566901 GPCPD1Q9NPB8 672 aa14.4□□□□□ -0.1
CFDP1-207ENST00000566901 ELP1O95163 1332 aa14.4□□□□□ -0.1
CFDP1-207ENST00000566901 PNMA6FA0A0J9YX94 578 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms