RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 TFR2Q9UP52 801 aa27.96■■■□□ 2.07
FANCA-221ENST00000566889 TJP1Q07157 1748 aa27.95■■■□□ 2.07
FANCA-221ENST00000566889 NF2P35240 595 aa27.95■■■□□ 2.07
FANCA-221ENST00000566889 CCDC40Q4G0X9 1142 aa27.95■■■□□ 2.07
FANCA-221ENST00000566889 KRT23Q9C075 422 aa27.95■■■□□ 2.07
FANCA-221ENST00000566889 XBP1P17861 261 aa27.95■■■□□ 2.06
FANCA-221ENST00000566889 VAV2P52735 878 aa27.95■■■□□ 2.06
FANCA-221ENST00000566889 GLE1Q53GS7 698 aaKnown RBP27.95■■■□□ 2.06
FANCA-221ENST00000566889 ZNF473Q8WTR7 871 aaKnown RBP27.95■■■□□ 2.06
FANCA-221ENST00000566889 HDAC7Q8WUI4 952 aa27.95■■■□□ 2.06
FANCA-221ENST00000566889 CD248Q9HCU0 757 aa27.95■■■□□ 2.06
FANCA-221ENST00000566889 PDS5AQ29RF7 1337 aaKnown RBP27.95■■■□□ 2.06
FANCA-221ENST00000566889 RCCD1A6NED2 376 aa27.94■■■□□ 2.06
FANCA-221ENST00000566889 COBLO75128 1261 aa27.94■■■□□ 2.06
FANCA-221ENST00000566889 CCDC50Q8IVM0 306 aa27.94■■■□□ 2.06
FANCA-221ENST00000566889 ZIM3Q96PE6 472 aa27.94■■■□□ 2.06
FANCA-221ENST00000566889 NHEJ1Q9H9Q4 299 aaPredicted RBP27.94■■■□□ 2.06
FANCA-221ENST00000566889 VEZTQ9HBM0 779 aa27.94■■■□□ 2.06
FANCA-221ENST00000566889 DISP2A7MBM2 1401 aa27.94■■■□□ 2.06
FANCA-221ENST00000566889 TACC1O75410 805 aa27.94■■■□□ 2.06
FANCA-221ENST00000566889 TCP1P17987 556 aaKnown RBP27.94■■■□□ 2.06
FANCA-221ENST00000566889 DNM2P50570 870 aa27.94■■■□□ 2.06
FANCA-221ENST00000566889 CDK17Q00537 523 aa27.94■■■□□ 2.06
FANCA-221ENST00000566889 CCDC57Q2TAC2 916 aa27.94■■■□□ 2.06
FANCA-221ENST00000566889 MTA3Q9BTC8 594 aa27.94■■■□□ 2.06
FANCA-221ENST00000566889 PPP1R37O75864 691 aa27.93■■■□□ 2.06
FANCA-221ENST00000566889 GCP02774 474 aa27.93■■■□□ 2.06
FANCA-221ENST00000566889 FAM69CQ0P6D2 419 aa27.93■■■□□ 2.06
FANCA-221ENST00000566889 EZH2Q15910 746 aaKnown RBP27.93■■■□□ 2.06
FANCA-221ENST00000566889 CD302Q8IX05 232 aa27.93■■■□□ 2.06
FANCA-221ENST00000566889 ACTR5Q9H9F9 607 aaPredicted RBP27.93■■■□□ 2.06
FANCA-221ENST00000566889 CDR1P51861 262 aa27.92■■■□□ 2.06
FANCA-221ENST00000566889 PTGISQ16647 500 aa27.92■■■□□ 2.06
FANCA-221ENST00000566889 IRF2BP1Q8IU81 584 aa27.92■■■□□ 2.06
FANCA-221ENST00000566889 TMTC2Q8N394 836 aa27.92■■■□□ 2.06
FANCA-221ENST00000566889 MIEF2Q96C03 454 aa27.92■■■□□ 2.06
FANCA-221ENST00000566889 VPS54Q9P1Q0 977 aa27.92■■■□□ 2.06
FANCA-221ENST00000566889 USO1O60763 962 aaKnown RBP27.92■■■□□ 2.06
FANCA-221ENST00000566889 SATB1Q01826 763 aa27.92■■■□□ 2.06
FANCA-221ENST00000566889 RNPC3Q96LT9 517 aaKnown RBP27.92■■■□□ 2.06
FANCA-221ENST00000566889 THAP9Q9H5L6 903 aa27.92■■■□□ 2.06
FANCA-221ENST00000566889 PKD1L3Q7Z443 1732 aa27.92■■■□□ 2.06
FANCA-221ENST00000566889 PHKG2P15735 406 aa27.91■■■□□ 2.06
FANCA-221ENST00000566889 CEP85LQ5SZL2 805 aa27.91■■■□□ 2.06
FANCA-221ENST00000566889 RNF187Q5TA31 235 aaPredicted RBP27.91■■■□□ 2.06
FANCA-221ENST00000566889 CCDC13Q8IYE1 715 aa27.91■■■□□ 2.06
FANCA-221ENST00000566889 ZNF512BQ96KM6 892 aaPredicted RBP27.91■■■□□ 2.06
FANCA-221ENST00000566889 BLZF1Q9H2G9 400 aa27.91■■■□□ 2.06
FANCA-221ENST00000566889 MACROD2A1Z1Q3 448 aa27.91■■■□□ 2.06
FANCA-221ENST00000566889 KRT2P35908 639 aa27.91■■■□□ 2.06
FANCA-221ENST00000566889 ATP1A2P50993 1020 aa27.91■■■□□ 2.06
FANCA-221ENST00000566889 ZBED6P86452 979 aa27.91■■■□□ 2.06
FANCA-221ENST00000566889 CFAP58Q5T655 872 aa27.91■■■□□ 2.06
FANCA-221ENST00000566889 HAUS3Q68CZ6 603 aa27.91■■■□□ 2.06
FANCA-221ENST00000566889 PDXDC2PQ6P474 469 aa27.91■■■□□ 2.06
FANCA-221ENST00000566889 PI16Q6UXB8 463 aa27.91■■■□□ 2.06
FANCA-221ENST00000566889 IQCKQ8N0W5 287 aa27.91■■■□□ 2.06
FANCA-221ENST00000566889 MAGEC3Q8TD91 643 aa27.91■■■□□ 2.06
FANCA-221ENST00000566889 TTYH3Q9C0H2 523 aa27.91■■■□□ 2.06
FANCA-221ENST00000566889 ODF2LQ9ULJ1 636 aa27.91■■■□□ 2.06
FANCA-221ENST00000566889 HYOU1Q9Y4L1 999 aa27.91■■■□□ 2.06
FANCA-221ENST00000566889 GOLGA6L7A0A1B0GV03 622 aa27.9■■■□□ 2.06
FANCA-221ENST00000566889 WTAPQ15007 396 aa27.9■■■□□ 2.06
FANCA-221ENST00000566889 ANKLE2Q86XL3 938 aa27.9■■■□□ 2.06
FANCA-221ENST00000566889 RNF26Q9BY78 433 aaPredicted RBP27.9■■■□□ 2.06
FANCA-221ENST00000566889 NUTM2BA6NNL0 878 aaPredicted RBP27.9■■■□□ 2.06
FANCA-221ENST00000566889 NUTM2EB1AL46 878 aaPredicted RBP27.9■■■□□ 2.06
FANCA-221ENST00000566889 FAM107AO95990 144 aa27.9■■■□□ 2.06
FANCA-221ENST00000566889 SRGNP10124 158 aa27.9■■■□□ 2.06
FANCA-221ENST00000566889 MRPL12P52815 198 aaKnown RBP27.9■■■□□ 2.06
FANCA-221ENST00000566889 NLRP14Q86W24 1093 aa27.9■■■□□ 2.06
FANCA-221ENST00000566889 MREGQ8N565 214 aa27.9■■■□□ 2.06
FANCA-221ENST00000566889 C3orf20Q8ND61 904 aa27.9■■■□□ 2.06
FANCA-221ENST00000566889 MYCBPAPQ8TBZ2 947 aa27.9■■■□□ 2.06
FANCA-221ENST00000566889 CCT8L2Q96SF2 557 aa27.9■■■□□ 2.06
FANCA-221ENST00000566889 RPN1P04843 607 aaKnown RBP27.89■■■□□ 2.06
FANCA-221ENST00000566889 KCNA6P17658 529 aa27.89■■■□□ 2.06
FANCA-221ENST00000566889 NR1D1P20393 614 aa27.89■■■□□ 2.06
FANCA-221ENST00000566889 MCAMP43121 646 aa27.89■■■□□ 2.06
FANCA-221ENST00000566889 PPP2R5BQ15173 497 aa27.89■■■□□ 2.06
FANCA-221ENST00000566889 SPA17Q15506 151 aa27.89■■■□□ 2.06
FANCA-221ENST00000566889 IFT20Q8IY31 132 aa27.89■■■□□ 2.06
FANCA-221ENST00000566889 SH2D3CQ8N5H7 860 aa27.89■■■□□ 2.06
FANCA-221ENST00000566889 NOC3LQ8WTT2 800 aaKnown RBP27.89■■■□□ 2.06
FANCA-221ENST00000566889 RAPGEF4Q8WZA2 1011 aa27.89■■■□□ 2.06
FANCA-221ENST00000566889 STAMQ92783 540 aa27.89■■■□□ 2.06
FANCA-221ENST00000566889 MAGEC2Q9UBF1 373 aaPredicted RBP27.89■■■□□ 2.06
FANCA-221ENST00000566889 GCFC2P16383 781 aaKnown RBP27.88■■■□□ 2.05
FANCA-221ENST00000566889 PRCPP42785 496 aa27.88■■■□□ 2.05
FANCA-221ENST00000566889 PAFAH1B1P43034 410 aa27.88■■■□□ 2.05
FANCA-221ENST00000566889 AKNAD1Q5T1N1 836 aa27.88■■■□□ 2.05
FANCA-221ENST00000566889 CCDC181Q5TID7 509 aa27.88■■■□□ 2.05
FANCA-221ENST00000566889 C6orf89Q6UWU4 347 aa27.88■■■□□ 2.05
FANCA-221ENST00000566889 IQCA1Q86XH1 822 aa27.88■■■□□ 2.05
FANCA-221ENST00000566889 CCDC155Q8N6L0 562 aa27.88■■■□□ 2.05
FANCA-221ENST00000566889 N4BP2L2Q92802 583 aaPredicted RBP27.88■■■□□ 2.05
FANCA-221ENST00000566889 STRBPQ96SI9 672 aaKnown RBP27.88■■■□□ 2.05
FANCA-221ENST00000566889 OSBPL9Q96SU4 736 aa27.88■■■□□ 2.05
FANCA-221ENST00000566889 SLC40A1Q9NP59 571 aa27.88■■■□□ 2.05
FANCA-221ENST00000566889 ERICH2A1L162 156 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms