RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 STAMQ92783 540 aa17.6■□□□□ 0.41
COMMD4-215ENST00000566843 NGLY1Q96IV0 654 aa17.6■□□□□ 0.41
COMMD4-215ENST00000566843 NACAP1Q9BZK3 213 aa17.6■□□□□ 0.41
COMMD4-215ENST00000566843 LUC7L2Q9Y383 392 aaKnown RBP17.6■□□□□ 0.41
COMMD4-215ENST00000566843 MYH3P11055 1940 aa17.6■□□□□ 0.41
COMMD4-215ENST00000566843 ANKRD65E5RJM6 399 aa17.6■□□□□ 0.41
COMMD4-215ENST00000566843 PRKAB2O43741 272 aa17.6■□□□□ 0.41
COMMD4-215ENST00000566843 SRGAP2O75044 1071 aa17.6■□□□□ 0.41
COMMD4-215ENST00000566843 PARP1P09874 1014 aaKnown RBP17.6■□□□□ 0.41
COMMD4-215ENST00000566843 ZNF174Q15697 407 aa17.6■□□□□ 0.41
COMMD4-215ENST00000566843 SYNE4Q8N205 404 aa17.6■□□□□ 0.41
COMMD4-215ENST00000566843 SPATA5Q8NB90 893 aa17.6■□□□□ 0.41
COMMD4-215ENST00000566843 AENQ8WTP8 325 aaKnown RBP17.6■□□□□ 0.41
COMMD4-215ENST00000566843 RUBCNQ92622 972 aa17.6■□□□□ 0.41
COMMD4-215ENST00000566843 JAKMIP2Q96AA8 810 aa17.6■□□□□ 0.41
COMMD4-215ENST00000566843 PURBQ96QR8 312 aaKnown RBP17.6■□□□□ 0.41
COMMD4-215ENST00000566843 GEMIN8Q9NWZ8 242 aaKnown RBP17.6■□□□□ 0.41
COMMD4-215ENST00000566843 LRP5O75197 1615 aa17.59■□□□□ 0.41
COMMD4-215ENST00000566843 MYBL2P10244 700 aa17.59■□□□□ 0.41
COMMD4-215ENST00000566843 TDO2P48775 406 aa17.59■□□□□ 0.41
COMMD4-215ENST00000566843 IRAK1P51617 712 aa17.59■□□□□ 0.41
COMMD4-215ENST00000566843 NPY5RQ15761 445 aa17.59■□□□□ 0.41
COMMD4-215ENST00000566843 LPIN2Q92539 896 aa17.59■□□□□ 0.41
COMMD4-215ENST00000566843 RNF216Q9NWF9 866 aaPredicted RBP17.59■□□□□ 0.41
COMMD4-215ENST00000566843 KRT86O43790 486 aa17.59■□□□□ 0.41
COMMD4-215ENST00000566843 RPN1P04843 607 aaKnown RBP17.59■□□□□ 0.41
COMMD4-215ENST00000566843 PPFIA1Q13136 1202 aa17.59■□□□□ 0.41
COMMD4-215ENST00000566843 PTGDRQ13258 359 aa17.59■□□□□ 0.41
COMMD4-215ENST00000566843 PUM3Q15397 648 aaKnown RBP17.59■□□□□ 0.41
COMMD4-215ENST00000566843 KIF6Q6ZMV9 814 aa17.59■□□□□ 0.41
COMMD4-215ENST00000566843 MMS22LQ6ZRQ5 1243 aa17.59■□□□□ 0.41
COMMD4-215ENST00000566843 CERS3Q8IU89 383 aa17.59■□□□□ 0.41
COMMD4-215ENST00000566843 KAT14Q9H8E8 782 aa17.59■□□□□ 0.41
COMMD4-215ENST00000566843 TOMM22Q9NS69 142 aa17.59■□□□□ 0.41
COMMD4-215ENST00000566843 PDE2AO00408 941 aaPredicted RBP17.58■□□□□ 0.4
COMMD4-215ENST00000566843 EXOC5O00471 708 aa17.58■□□□□ 0.4
COMMD4-215ENST00000566843 EEF1GP26641 437 aaKnown RBP17.58■□□□□ 0.4
COMMD4-215ENST00000566843 SF3B2Q13435 895 aaKnown RBP17.58■□□□□ 0.4
COMMD4-215ENST00000566843 ZNF572Q7Z3I7 529 aaPredicted RBP17.58■□□□□ 0.4
COMMD4-215ENST00000566843 LCORLQ8N3X6 602 aa17.58■□□□□ 0.4
COMMD4-215ENST00000566843 MMGT1Q8N4V1 131 aa17.58■□□□□ 0.4
COMMD4-215ENST00000566843 UBAC1Q9BSL1 405 aa17.58■□□□□ 0.4
COMMD4-215ENST00000566843 FAM184BQ9ULE4 1060 aa17.58■□□□□ 0.4
COMMD4-215ENST00000566843 SLC4A4Q9Y6R1 1079 aa17.58■□□□□ 0.4
COMMD4-215ENST00000566843 PDS5AQ29RF7 1337 aaKnown RBP17.58■□□□□ 0.4
COMMD4-215ENST00000566843 SLIT2O94813 1529 aa17.58■□□□□ 0.4
COMMD4-215ENST00000566843 PRCPP42785 496 aa17.58■□□□□ 0.4
COMMD4-215ENST00000566843 TSR1Q2NL82 804 aaKnown RBP17.58■□□□□ 0.4
COMMD4-215ENST00000566843 SWT1Q5T5J6 900 aaKnown RBP17.58■□□□□ 0.4
COMMD4-215ENST00000566843 GIGYF2Q6Y7W6 1299 aaKnown RBP17.58■□□□□ 0.4
COMMD4-215ENST00000566843 GBP6Q6ZN66 633 aa17.58■□□□□ 0.4
COMMD4-215ENST00000566843 NLRP10Q86W26 655 aa17.58■□□□□ 0.4
COMMD4-215ENST00000566843 ADSSL1Q8N142 457 aa17.58■□□□□ 0.4
COMMD4-215ENST00000566843 CAPZA3Q96KX2 299 aa17.58■□□□□ 0.4
COMMD4-215ENST00000566843 SPATA31A6Q5VVP1 1343 aa17.57■□□□□ 0.4
COMMD4-215ENST00000566843 GOLGA6CA6NDK9 693 aa17.57■□□□□ 0.4
COMMD4-215ENST00000566843 GOLGA6DP0CG33 693 aa17.57■□□□□ 0.4
COMMD4-215ENST00000566843 ITIH3Q06033 890 aa17.57■□□□□ 0.4
COMMD4-215ENST00000566843 IQCEQ6IPM2 695 aa17.57■□□□□ 0.4
COMMD4-215ENST00000566843 AMOTL1Q8IY63 956 aa17.57■□□□□ 0.4
COMMD4-215ENST00000566843 SH3GL2Q99962 352 aa17.57■□□□□ 0.4
COMMD4-215ENST00000566843 TTYH3Q9C0H2 523 aa17.57■□□□□ 0.4
COMMD4-215ENST00000566843 THAP9Q9H5L6 903 aa17.57■□□□□ 0.4
COMMD4-215ENST00000566843 GNL3LQ9NVN8 582 aaKnown RBP17.57■□□□□ 0.4
COMMD4-215ENST00000566843 GOLGA6AQ9NYA3 693 aa17.57■□□□□ 0.4
COMMD4-215ENST00000566843 ANAPC4Q9UJX5 808 aa17.57■□□□□ 0.4
COMMD4-215ENST00000566843 TNKSO95271 1327 aa17.56■□□□□ 0.4
COMMD4-215ENST00000566843 GOLGA6BA6NDN3 693 aa17.56■□□□□ 0.4
COMMD4-215ENST00000566843 PRDM1O75626 825 aa17.56■□□□□ 0.4
COMMD4-215ENST00000566843 CYLC1P35663 651 aaPredicted RBP17.56■□□□□ 0.4
COMMD4-215ENST00000566843 TRAPPC10P48553 1259 aa17.56■□□□□ 0.4
COMMD4-215ENST00000566843 RASGRF1Q13972 1273 aa17.56■□□□□ 0.4
COMMD4-215ENST00000566843 IL17AQ16552 155 aa17.56■□□□□ 0.4
COMMD4-215ENST00000566843 KIAA1328Q86T90 577 aa17.56■□□□□ 0.4
COMMD4-215ENST00000566843 CCDC170Q8IYT3 715 aa17.56■□□□□ 0.4
COMMD4-215ENST00000566843 RBM28Q9NW13 759 aaKnown RBP17.56■□□□□ 0.4
COMMD4-215ENST00000566843 TFR2Q9UP52 801 aa17.56■□□□□ 0.4
COMMD4-215ENST00000566843 GDAQ9Y2T3 454 aa17.56■□□□□ 0.4
COMMD4-215ENST00000566843 SPATA31A1Q5TZJ5 1347 aa17.56■□□□□ 0.4
COMMD4-215ENST00000566843 RCCD1A6NED2 376 aa17.56■□□□□ 0.4
COMMD4-215ENST00000566843 ZMYND10O75800 440 aa17.56■□□□□ 0.4
COMMD4-215ENST00000566843 PPARAQ07869 468 aa17.56■□□□□ 0.4
COMMD4-215ENST00000566843 GSPT2Q8IYD1 628 aaKnown RBP17.56■□□□□ 0.4
COMMD4-215ENST00000566843 FNBP4Q8N3X1 1017 aaPredicted RBP17.56■□□□□ 0.4
COMMD4-215ENST00000566843 LACRTQ9GZZ8 138 aa17.56■□□□□ 0.4
COMMD4-215ENST00000566843 V9GY48 417 aaPredicted RBP17.56■□□□□ 0.4
COMMD4-215ENST00000566843 MROH5Q6ZUA9 1318 aa17.55■□□□□ 0.4
COMMD4-215ENST00000566843 GOLGA8KD6RF30 607 aa17.55■□□□□ 0.4
COMMD4-215ENST00000566843 SRGNP10124 158 aa17.55■□□□□ 0.4
COMMD4-215ENST00000566843 DNM2P50570 870 aa17.55■□□□□ 0.4
COMMD4-215ENST00000566843 TEX2Q8IWB9 1127 aa17.55■□□□□ 0.4
COMMD4-215ENST00000566843 DEF6Q9H4E7 631 aa17.55■□□□□ 0.4
COMMD4-215ENST00000566843 NRAPQ86VF7 1730 aa17.55■□□□□ 0.4
COMMD4-215ENST00000566843 GRIN2DO15399 1336 aa17.55■□□□□ 0.4
COMMD4-215ENST00000566843 EBAG9O00559 213 aa17.55■□□□□ 0.4
COMMD4-215ENST00000566843 CCT5P48643 541 aa17.55■□□□□ 0.4
COMMD4-215ENST00000566843 MCTP2Q6DN12 878 aa17.55■□□□□ 0.4
COMMD4-215ENST00000566843 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.55■□□□□ 0.4
COMMD4-215ENST00000566843 MICALL1Q8N3F8 863 aa17.55■□□□□ 0.4
COMMD4-215ENST00000566843 RETREG2Q8NC44 543 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms