RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 LETM1O95202 739 aaPredicted RBP13.02□□□□□ -0.33
LINC00562-201ENST00000566385 PFKFB1P16118 471 aa13.02□□□□□ -0.33
LINC00562-201ENST00000566385 RASA3Q14644 834 aa13.02□□□□□ -0.33
LINC00562-201ENST00000566385 ZNF174Q15697 407 aa13.02□□□□□ -0.33
LINC00562-201ENST00000566385 CCDC96Q2M329 555 aa13.02□□□□□ -0.33
LINC00562-201ENST00000566385 ASPRV1Q53RT3 343 aa13.02□□□□□ -0.33
LINC00562-201ENST00000566385 RBM43Q6ZSC3 357 aaKnown RBP13.02□□□□□ -0.33
LINC00562-201ENST00000566385 CCDC84Q86UT8 332 aaPredicted RBP13.02□□□□□ -0.33
LINC00562-201ENST00000566385 RRP36Q96EU6 259 aaKnown RBP13.02□□□□□ -0.33
LINC00562-201ENST00000566385 BRMS1Q9HCU9 246 aa13.02□□□□□ -0.33
LINC00562-201ENST00000566385 SH3GLB2Q9NR46 395 aa13.02□□□□□ -0.33
LINC00562-201ENST00000566385 HERC5Q9UII4 1024 aaKnown RBP13.02□□□□□ -0.33
LINC00562-201ENST00000566385 F5H6K3 240 aa13.01□□□□□ -0.33
LINC00562-201ENST00000566385 CMA1P23946 247 aa13.01□□□□□ -0.33
LINC00562-201ENST00000566385 KLRC3Q07444 240 aa13.01□□□□□ -0.33
LINC00562-201ENST00000566385 FBXO2Q9UK22 296 aaPredicted RBP13.01□□□□□ -0.33
LINC00562-201ENST00000566385 PCDHA6Q9UN73 950 aa13.01□□□□□ -0.33
LINC00562-201ENST00000566385 PCDHA8Q9Y5H6 950 aa13.01□□□□□ -0.33
LINC00562-201ENST00000566385 USP17L10C9JJH3 530 aa13.01□□□□□ -0.33
LINC00562-201ENST00000566385 NAPAP54920 295 aa13.01□□□□□ -0.33
LINC00562-201ENST00000566385 KIAA1755Q5JYT7 1200 aa13.01□□□□□ -0.33
LINC00562-201ENST00000566385 FKBP1CQ5VVH2 108 aa13.01□□□□□ -0.33
LINC00562-201ENST00000566385 USP49Q70CQ1 688 aa13.01□□□□□ -0.33
LINC00562-201ENST00000566385 FAM83AQ86UY5 434 aa13.01□□□□□ -0.33
LINC00562-201ENST00000566385 SPICE1Q8N0Z3 855 aa13.01□□□□□ -0.33
LINC00562-201ENST00000566385 ACER1Q8TDN7 264 aa13.01□□□□□ -0.33
LINC00562-201ENST00000566385 SEC63Q9UGP8 760 aaKnown RBP13.01□□□□□ -0.33
LINC00562-201ENST00000566385 SMCO2A6NFE2 343 aa13□□□□□ -0.33
LINC00562-201ENST00000566385 TRIM75PA6NK02 468 aa13□□□□□ -0.33
LINC00562-201ENST00000566385 ZNF202O95125 648 aa13□□□□□ -0.33
LINC00562-201ENST00000566385 SMARCA1P28370 1054 aa13□□□□□ -0.33
LINC00562-201ENST00000566385 SLC1A4P43007 532 aa13□□□□□ -0.33
LINC00562-201ENST00000566385 SLFN13Q68D06 897 aa13□□□□□ -0.33
LINC00562-201ENST00000566385 TEPSINQ96N21 525 aa13□□□□□ -0.33
LINC00562-201ENST00000566385 ZMYND12Q9H0C1 365 aa13□□□□□ -0.33
LINC00562-201ENST00000566385 KINO60870 393 aaKnown RBP13□□□□□ -0.33
LINC00562-201ENST00000566385 PTPREP23469 700 aa13□□□□□ -0.33
LINC00562-201ENST00000566385 RPS12P25398 132 aaKnown RBP13□□□□□ -0.33
LINC00562-201ENST00000566385 CALML3P27482 149 aa13□□□□□ -0.33
LINC00562-201ENST00000566385 SNAP25P60880 206 aa13□□□□□ -0.33
LINC00562-201ENST00000566385 KRI1Q8N9T8 703 aaKnown RBP13□□□□□ -0.33
LINC00562-201ENST00000566385 DPF2Q92785 391 aa13□□□□□ -0.33
LINC00562-201ENST00000566385 HPSEQ9Y251 543 aa13□□□□□ -0.33
LINC00562-201ENST00000566385 NDUFB10O96000 172 aa12.99□□□□□ -0.33
LINC00562-201ENST00000566385 MCM7P33993 719 aa12.99□□□□□ -0.33
LINC00562-201ENST00000566385 TYRO3Q06418 890 aa12.99□□□□□ -0.33
LINC00562-201ENST00000566385 TTC38Q5R3I4 469 aa12.99□□□□□ -0.33
LINC00562-201ENST00000566385 PRAMEF18Q5VWM3 479 aa12.99□□□□□ -0.33
LINC00562-201ENST00000566385 RESP18Q5W5W9 173 aa12.99□□□□□ -0.33
LINC00562-201ENST00000566385 JMYQ8N9B5 988 aa12.99□□□□□ -0.33
LINC00562-201ENST00000566385 SYT17Q9BSW7 474 aa12.99□□□□□ -0.33
LINC00562-201ENST00000566385 GLIS2Q9BZE0 524 aaPredicted RBP12.99□□□□□ -0.33
LINC00562-201ENST00000566385 HACL1Q9UJ83 578 aa12.99□□□□□ -0.33
LINC00562-201ENST00000566385 SBF1O95248 1867 aa12.99□□□□□ -0.33
LINC00562-201ENST00000566385 CUTAO60888 179 aa12.99□□□□□ -0.33
LINC00562-201ENST00000566385 PTGDRQ13258 359 aa12.99□□□□□ -0.33
LINC00562-201ENST00000566385 INF2Q27J81 1249 aa12.99□□□□□ -0.33
LINC00562-201ENST00000566385 GPATCH4Q5T3I0 446 aaKnown RBP12.99□□□□□ -0.33
LINC00562-201ENST00000566385 CSRNP2Q9H175 543 aa12.99□□□□□ -0.33
LINC00562-201ENST00000566385 ZBTB21Q9ULJ3 1066 aa12.99□□□□□ -0.33
LINC00562-201ENST00000566385 FZD1Q9UP38 647 aa12.99□□□□□ -0.33
LINC00562-201ENST00000566385 CCDC148Q8NFR7 591 aa12.98□□□□□ -0.33
LINC00562-201ENST00000566385 SDF4Q9BRK5 362 aa12.98□□□□□ -0.33
LINC00562-201ENST00000566385 TMEM260Q9NX78 707 aa12.98□□□□□ -0.33
LINC00562-201ENST00000566385 BIN2Q9UBW5 565 aaPredicted RBP12.98□□□□□ -0.33
LINC00562-201ENST00000566385 SRPRBQ9Y5M8 271 aaKnown RBP12.98□□□□□ -0.33
LINC00562-201ENST00000566385 SMCHD1A6NHR9 2005 aa12.98□□□□□ -0.33
LINC00562-201ENST00000566385 CCDC192P0DO97 292 aa12.98□□□□□ -0.33
LINC00562-201ENST00000566385 TAL1P17542 331 aaPredicted RBP12.98□□□□□ -0.33
LINC00562-201ENST00000566385 CAP2P40123 477 aa12.98□□□□□ -0.33
LINC00562-201ENST00000566385 SYKP43405 635 aa12.98□□□□□ -0.33
LINC00562-201ENST00000566385 ZYXQ15942 572 aaKnown RBP12.98□□□□□ -0.33
LINC00562-201ENST00000566385 IL17AQ16552 155 aa12.98□□□□□ -0.33
LINC00562-201ENST00000566385 KIF4BQ2VIQ3 1234 aa12.98□□□□□ -0.33
LINC00562-201ENST00000566385 LONRF3Q496Y0 759 aa12.98□□□□□ -0.33
LINC00562-201ENST00000566385 DAGLBQ8NCG7 672 aa12.98□□□□□ -0.33
LINC00562-201ENST00000566385 TRPM4Q8TD43 1214 aa12.98□□□□□ -0.33
LINC00562-201ENST00000566385 EPSTI1Q96J88 318 aa12.98□□□□□ -0.33
LINC00562-201ENST00000566385 NOL7Q9UMY1 257 aaKnown RBP12.98□□□□□ -0.33
LINC00562-201ENST00000566385 PNMA6FA0A0J9YX94 578 aa12.97□□□□□ -0.33
LINC00562-201ENST00000566385 CCDC194A0A1B0GVG4 234 aa12.97□□□□□ -0.33
LINC00562-201ENST00000566385 PHF20L1A8MW92 1017 aa12.97□□□□□ -0.33
LINC00562-201ENST00000566385 TBC1D12O60347 775 aa12.97□□□□□ -0.33
LINC00562-201ENST00000566385 YBX3P16989 372 aaKnown RBP eCLIP12.97□□□□□ -0.33
LINC00562-201ENST00000566385 LMNB1P20700 586 aa12.97□□□□□ -0.33
LINC00562-201ENST00000566385 JAKMIP3Q5VZ66 844 aa12.97□□□□□ -0.33
LINC00562-201ENST00000566385 MTMR8Q96EF0 704 aa12.97□□□□□ -0.33
LINC00562-201ENST00000566385 DEFB129Q9H1M3 183 aa12.97□□□□□ -0.33
LINC00562-201ENST00000566385 ZBTB5O15062 677 aa12.97□□□□□ -0.33
LINC00562-201ENST00000566385 EPS15P42566 896 aa12.97□□□□□ -0.33
LINC00562-201ENST00000566385 MAP3K10Q02779 954 aa12.97□□□□□ -0.33
LINC00562-201ENST00000566385 ANO6Q4KMQ2 910 aa12.97□□□□□ -0.33
LINC00562-201ENST00000566385 NBPF12Q5TAG4 269 aaPredicted RBP12.97□□□□□ -0.33
LINC00562-201ENST00000566385 PDILTQ8N807 584 aa12.97□□□□□ -0.33
LINC00562-201ENST00000566385 GMCL1P1Q8NEA9 526 aa12.97□□□□□ -0.33
LINC00562-201ENST00000566385 DCAF4Q8WV16 495 aa12.97□□□□□ -0.33
LINC00562-201ENST00000566385 KCNH3Q9ULD8 1083 aa12.97□□□□□ -0.33
LINC00562-201ENST00000566385 CEP131Q9UPN4 1083 aa12.97□□□□□ -0.33
LINC00562-201ENST00000566385 DICER1Q9UPY3 1922 aaKnown RBP12.96□□□□□ -0.33
LINC00562-201ENST00000566385 A0A087X0B3 334 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms