RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 ZNF865P0CJ78 1059 aaPredicted RBP19.71■□□□□ 0.75
TSR3-202ENST00000566296 TSHZ3Q63HK5 1081 aa19.71■□□□□ 0.75
TSR3-202ENST00000566296 PRPF38AQ8NAV1 312 aaKnown RBP19.71■□□□□ 0.75
TSR3-202ENST00000566296 DCTPP1Q9H773 170 aa19.71■□□□□ 0.75
TSR3-202ENST00000566296 EPB41L4AQ9HCS5 686 aaPredicted RBP19.71■□□□□ 0.75
TSR3-202ENST00000566296 SYNGAP1Q96PV0 1343 aa19.71■□□□□ 0.75
TSR3-202ENST00000566296 DNAH12Q6ZR08 3092 aa19.7■□□□□ 0.74
TSR3-202ENST00000566296 POTEB2H3BUK9 544 aa19.7■□□□□ 0.74
TSR3-202ENST00000566296 CLTBP09497 229 aa19.7■□□□□ 0.74
TSR3-202ENST00000566296 TAL1P17542 331 aaPredicted RBP19.7■□□□□ 0.74
TSR3-202ENST00000566296 SLC4A3P48751 1232 aa19.7■□□□□ 0.74
TSR3-202ENST00000566296 TLE2Q04725 743 aa19.7■□□□□ 0.74
TSR3-202ENST00000566296 SHHQ15465 462 aa19.7■□□□□ 0.74
TSR3-202ENST00000566296 CPXCR1Q8N123 301 aa19.7■□□□□ 0.74
TSR3-202ENST00000566296 FAM161BQ96MY7 647 aa19.7■□□□□ 0.74
TSR3-202ENST00000566296 NACAP1Q9BZK3 213 aa19.7■□□□□ 0.74
TSR3-202ENST00000566296 CLIP2Q9UDT6 1046 aa19.7■□□□□ 0.74
TSR3-202ENST00000566296 ZHX1Q9UKY1 873 aaPredicted RBP19.7■□□□□ 0.74
TSR3-202ENST00000566296 TACC3Q9Y6A5 838 aa19.7■□□□□ 0.74
TSR3-202ENST00000566296 A0A1W2PQ45 241 aaPredicted RBP19.69■□□□□ 0.74
TSR3-202ENST00000566296 A0A1W2PQY0 241 aa19.69■□□□□ 0.74
TSR3-202ENST00000566296 M0R2C6 588 aa19.69■□□□□ 0.74
TSR3-202ENST00000566296 PQBP1O60828 265 aaKnown RBP19.69■□□□□ 0.74
TSR3-202ENST00000566296 C9orf50Q5SZB4 431 aa19.69■□□□□ 0.74
TSR3-202ENST00000566296 SH3RF1Q7Z6J0 888 aa19.69■□□□□ 0.74
TSR3-202ENST00000566296 KIFC2Q96AC6 838 aa19.69■□□□□ 0.74
TSR3-202ENST00000566296 LENG1Q96BZ8 264 aaPredicted RBP19.69■□□□□ 0.74
TSR3-202ENST00000566296 CEP95Q96GE4 821 aa19.69■□□□□ 0.74
TSR3-202ENST00000566296 GUCD1Q96NT3 240 aa19.69■□□□□ 0.74
TSR3-202ENST00000566296 FEM1BQ9UK73 627 aa19.69■□□□□ 0.74
TSR3-202ENST00000566296 FAM184BQ9ULE4 1060 aa19.69■□□□□ 0.74
TSR3-202ENST00000566296 SYNPO2Q9UMS6 1093 aa19.69■□□□□ 0.74
TSR3-202ENST00000566296 IGKV6D-41A0A0C4DH26 115 aa19.68■□□□□ 0.74
TSR3-202ENST00000566296 TRIM43BA6NCK2 446 aa19.68■□□□□ 0.74
TSR3-202ENST00000566296 ATP2A1O14983 1001 aa19.68■□□□□ 0.74
TSR3-202ENST00000566296 ERC2O15083 957 aa19.68■□□□□ 0.74
TSR3-202ENST00000566296 ADAMTS4O75173 837 aa19.68■□□□□ 0.74
TSR3-202ENST00000566296 PRDM1O75626 825 aa19.68■□□□□ 0.74
TSR3-202ENST00000566296 TTLL1O95922 423 aa19.68■□□□□ 0.74
TSR3-202ENST00000566296 SLC3A2P08195 630 aaKnown RBP19.68■□□□□ 0.74
TSR3-202ENST00000566296 LRRC47Q8N1G4 583 aaKnown RBP19.68■□□□□ 0.74
TSR3-202ENST00000566296 TRIM43Q96BQ3 446 aaPredicted RBP19.68■□□□□ 0.74
TSR3-202ENST00000566296 TSEN34Q9BSV6 310 aaKnown RBP19.68■□□□□ 0.74
TSR3-202ENST00000566296 STARD7Q9NQZ5 370 aa19.68■□□□□ 0.74
TSR3-202ENST00000566296 FBXO40Q9UH90 709 aa19.68■□□□□ 0.74
TSR3-202ENST00000566296 ISY1Q9ULR0 285 aaKnown RBP19.68■□□□□ 0.74
TSR3-202ENST00000566296 RIPK3Q9Y572 518 aa19.68■□□□□ 0.74
TSR3-202ENST00000566296 SYNRGQ9UMZ2 1314 aa19.68■□□□□ 0.74
TSR3-202ENST00000566296 MCM3APO60318 1980 aa19.68■□□□□ 0.74
TSR3-202ENST00000566296 PLIN4Q96Q06 1357 aa19.68■□□□□ 0.74
TSR3-202ENST00000566296 TSPY3P0CV98 308 aa19.67■□□□□ 0.74
TSR3-202ENST00000566296 TSPY8P0CW00 308 aa19.67■□□□□ 0.74
TSR3-202ENST00000566296 PDE4BQ07343 736 aa19.67■□□□□ 0.74
TSR3-202ENST00000566296 ZNF467Q7Z7K2 595 aaPredicted RBP19.67■□□□□ 0.74
TSR3-202ENST00000566296 NUP133Q8WUM0 1156 aa19.67■□□□□ 0.74
TSR3-202ENST00000566296 RAVER2Q9HCJ3 691 aaKnown RBP19.67■□□□□ 0.74
TSR3-202ENST00000566296 MTMR4Q9NYA4 1195 aa19.67■□□□□ 0.74
TSR3-202ENST00000566296 TTC41PQ6P2S7 1318 aa19.67■□□□□ 0.74
TSR3-202ENST00000566296 DNAJC25-GNG10A0A024R161 153 aa19.66■□□□□ 0.74
TSR3-202ENST00000566296 MOXD2PA6NHM9 499 aa19.66■□□□□ 0.74
TSR3-202ENST00000566296 PATL2C9JE40 543 aaKnown RBP19.66■□□□□ 0.74
TSR3-202ENST00000566296 RAG1P15918 1043 aa19.66■□□□□ 0.74
TSR3-202ENST00000566296 OAZ1P54368 228 aa19.66■□□□□ 0.74
TSR3-202ENST00000566296 SMAD3P84022 425 aaKnown RBP19.66■□□□□ 0.74
TSR3-202ENST00000566296 MAMDC4Q6UXC1 1216 aa19.66■□□□□ 0.74
TSR3-202ENST00000566296 IFNL3Q8IZI9 196 aa19.66■□□□□ 0.74
TSR3-202ENST00000566296 ANKRD35Q8N283 1001 aa19.66■□□□□ 0.74
TSR3-202ENST00000566296 GMCL1P1Q8NEA9 526 aa19.66■□□□□ 0.74
TSR3-202ENST00000566296 CHST13Q8NET6 341 aa19.66■□□□□ 0.74
TSR3-202ENST00000566296 MKL1Q969V6 931 aa19.66■□□□□ 0.74
TSR3-202ENST00000566296 FSD1Q9BTV5 496 aa19.66■□□□□ 0.74
TSR3-202ENST00000566296 NAPBQ9H115 298 aa19.66■□□□□ 0.74
TSR3-202ENST00000566296 SPC25Q9HBM1 224 aa19.66■□□□□ 0.74
TSR3-202ENST00000566296 SLC38A10Q9HBR0 1119 aa19.66■□□□□ 0.74
TSR3-202ENST00000566296 KIAA0355O15063 1070 aa19.65■□□□□ 0.74
TSR3-202ENST00000566296 SNAI1O95863 264 aaPredicted RBP19.65■□□□□ 0.74
TSR3-202ENST00000566296 ACLYP53396 1101 aa19.65■□□□□ 0.74
TSR3-202ENST00000566296 SLFN13Q68D06 897 aa19.65■□□□□ 0.74
TSR3-202ENST00000566296 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.65■□□□□ 0.74
TSR3-202ENST00000566296 RNPC3Q96LT9 517 aaKnown RBP19.65■□□□□ 0.74
TSR3-202ENST00000566296 TMEM39AQ9NV64 488 aa19.65■□□□□ 0.74
TSR3-202ENST00000566296 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.65■□□□□ 0.74
TSR3-202ENST00000566296 DCDC2CA8MYV0 355 aa19.64■□□□□ 0.73
TSR3-202ENST00000566296 DUSP11O75319 330 aaKnown RBP19.64■□□□□ 0.73
TSR3-202ENST00000566296 FDX1P10109 184 aa19.64■□□□□ 0.73
TSR3-202ENST00000566296 BMP3P12645 472 aa19.64■□□□□ 0.73
TSR3-202ENST00000566296 PPP4R3BQ5MIZ7 849 aa19.64■□□□□ 0.73
TSR3-202ENST00000566296 KLHDC9Q8NEP7 349 aa19.64■□□□□ 0.73
TSR3-202ENST00000566296 NEDD1Q8NHV4 660 aa19.64■□□□□ 0.73
TSR3-202ENST00000566296 ABHD16BQ9H3Z7 469 aa19.64■□□□□ 0.73
TSR3-202ENST00000566296 MROH7Q68CQ1 1323 aa19.63■□□□□ 0.73
TSR3-202ENST00000566296 C6orf222P0C671 652 aaPredicted RBP19.63■□□□□ 0.73
TSR3-202ENST00000566296 STAT2P52630 851 aa19.63■□□□□ 0.73
TSR3-202ENST00000566296 FPGSQ05932 587 aa19.63■□□□□ 0.73
TSR3-202ENST00000566296 PPARAQ07869 468 aa19.63■□□□□ 0.73
TSR3-202ENST00000566296 IKQ13123 557 aaPredicted RBP19.63■□□□□ 0.73
TSR3-202ENST00000566296 ACVR2BQ13705 512 aa19.63■□□□□ 0.73
TSR3-202ENST00000566296 ARMCX2Q7L311 632 aa19.63■□□□□ 0.73
TSR3-202ENST00000566296 ANKRD33Q7Z3H0 272 aa19.63■□□□□ 0.73
TSR3-202ENST00000566296 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms