RNA–Protein interactions for RNA: ENST00000566052.1

IFT140-207, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 544 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-207ENST00000566052 MTMR4Q9NYA4 1195 aa17.71■□□□□ 0.43
IFT140-207ENST00000566052 CLIP2Q9UDT6 1046 aa17.71■□□□□ 0.43
IFT140-207ENST00000566052 RIPK3Q9Y572 518 aa17.71■□□□□ 0.43
IFT140-207ENST00000566052 PLIN4Q96Q06 1357 aa17.7■□□□□ 0.42
IFT140-207ENST00000566052 AKR1A1P14550 325 aa17.7■□□□□ 0.42
IFT140-207ENST00000566052 TDO2P48775 406 aa17.7■□□□□ 0.42
IFT140-207ENST00000566052 SNRNP48Q6IEG0 339 aaKnown RBP17.7■□□□□ 0.42
IFT140-207ENST00000566052 RNF180Q86T96 592 aa17.7■□□□□ 0.42
IFT140-207ENST00000566052 IFNL3Q8IZI9 196 aa17.7■□□□□ 0.42
IFT140-207ENST00000566052 ZNF444Q8N0Y2 327 aaPredicted RBP17.7■□□□□ 0.42
IFT140-207ENST00000566052 FERMT2Q96AC1 680 aa17.7■□□□□ 0.42
IFT140-207ENST00000566052 PDLIM7Q9NR12 457 aa17.7■□□□□ 0.42
IFT140-207ENST00000566052 SYNGAP1Q96PV0 1343 aa17.7■□□□□ 0.42
IFT140-207ENST00000566052 MYCNP04198 464 aaPredicted RBP17.69■□□□□ 0.42
IFT140-207ENST00000566052 ZNF467Q7Z7K2 595 aaPredicted RBP17.69■□□□□ 0.42
IFT140-207ENST00000566052 STK11IPQ8N1F8 1099 aa17.69■□□□□ 0.42
IFT140-207ENST00000566052 GMCL1P1Q8NEA9 526 aa17.69■□□□□ 0.42
IFT140-207ENST00000566052 PI4K2BQ8TCG2 481 aa17.69■□□□□ 0.42
IFT140-207ENST00000566052 CEP95Q96GE4 821 aa17.69■□□□□ 0.42
IFT140-207ENST00000566052 SLC38A10Q9HBR0 1119 aa17.69■□□□□ 0.42
IFT140-207ENST00000566052 CNPY2Q9Y2B0 182 aa17.69■□□□□ 0.42
IFT140-207ENST00000566052 MCM3APO60318 1980 aa17.69■□□□□ 0.42
IFT140-207ENST00000566052 TRIM43BA6NCK2 446 aa17.68■□□□□ 0.42
IFT140-207ENST00000566052 ERC2O15083 957 aa17.68■□□□□ 0.42
IFT140-207ENST00000566052 ZBED4O75132 1171 aa17.68■□□□□ 0.42
IFT140-207ENST00000566052 ADAMTS4O75173 837 aa17.68■□□□□ 0.42
IFT140-207ENST00000566052 PRDM1O75626 825 aa17.68■□□□□ 0.42
IFT140-207ENST00000566052 SNAI1O95863 264 aaPredicted RBP17.68■□□□□ 0.42
IFT140-207ENST00000566052 TTLL1O95922 423 aa17.68■□□□□ 0.42
IFT140-207ENST00000566052 PGK1P00558 417 aa17.68■□□□□ 0.42
IFT140-207ENST00000566052 APPP05067 770 aa17.68■□□□□ 0.42
IFT140-207ENST00000566052 OAZ1P54368 228 aa17.68■□□□□ 0.42
IFT140-207ENST00000566052 TLE2Q04725 743 aa17.68■□□□□ 0.42
IFT140-207ENST00000566052 SH3RF1Q7Z6J0 888 aa17.68■□□□□ 0.42
IFT140-207ENST00000566052 NEDD1Q8NHV4 660 aa17.68■□□□□ 0.42
IFT140-207ENST00000566052 TRIM43Q96BQ3 446 aaPredicted RBP17.68■□□□□ 0.42
IFT140-207ENST00000566052 TSEN34Q9BSV6 310 aaKnown RBP17.68■□□□□ 0.42
IFT140-207ENST00000566052 NACAP1Q9BZK3 213 aa17.68■□□□□ 0.42
IFT140-207ENST00000566052 FEM1BQ9UK73 627 aa17.68■□□□□ 0.42
IFT140-207ENST00000566052 PCDHB15Q9Y5E8 787 aa17.68■□□□□ 0.42
IFT140-207ENST00000566052 TACC3Q9Y6A5 838 aa17.68■□□□□ 0.42
IFT140-207ENST00000566052 DLL1O00548 723 aa17.67■□□□□ 0.42
IFT140-207ENST00000566052 FDX1P10109 184 aa17.67■□□□□ 0.42
IFT140-207ENST00000566052 PDE4BQ07343 736 aa17.67■□□□□ 0.42
IFT140-207ENST00000566052 SHHQ15465 462 aa17.67■□□□□ 0.42
IFT140-207ENST00000566052 ZMYM1Q5SVZ6 1142 aa17.67■□□□□ 0.42
IFT140-207ENST00000566052 BADQ92934 168 aa17.67■□□□□ 0.42
IFT140-207ENST00000566052 DDX11Q96FC9 970 aa17.67■□□□□ 0.42
IFT140-207ENST00000566052 SEC62Q99442 399 aaKnown RBP17.67■□□□□ 0.42
IFT140-207ENST00000566052 PRDM5Q9NQX1 630 aaPredicted RBP17.67■□□□□ 0.42
IFT140-207ENST00000566052 FBXO40Q9UH90 709 aa17.67■□□□□ 0.42
IFT140-207ENST00000566052 A0A1W2PQ45 241 aaPredicted RBP17.66■□□□□ 0.42
IFT140-207ENST00000566052 A0A1W2PQY0 241 aa17.66■□□□□ 0.42
IFT140-207ENST00000566052 KIAA0355O15063 1070 aa17.66■□□□□ 0.42
IFT140-207ENST00000566052 C9orf50Q5SZB4 431 aa17.66■□□□□ 0.42
IFT140-207ENST00000566052 CCSAPQ6IQ19 270 aaPredicted RBP17.66■□□□□ 0.42
IFT140-207ENST00000566052 CPXCR1Q8N123 301 aa17.66■□□□□ 0.42
IFT140-207ENST00000566052 KLHDC9Q8NEP7 349 aa17.66■□□□□ 0.42
IFT140-207ENST00000566052 CHST13Q8NET6 341 aa17.66■□□□□ 0.42
IFT140-207ENST00000566052 KIFC2Q96AC6 838 aa17.66■□□□□ 0.42
IFT140-207ENST00000566052 GUCD1Q96NT3 240 aa17.66■□□□□ 0.42
IFT140-207ENST00000566052 FAM184BQ9ULE4 1060 aa17.66■□□□□ 0.42
IFT140-207ENST00000566052 SYNRGQ9UMZ2 1314 aa17.66■□□□□ 0.42
IFT140-207ENST00000566052 DUSP11O75319 330 aaKnown RBP17.65■□□□□ 0.42
IFT140-207ENST00000566052 SLC3A2P08195 630 aaKnown RBP17.65■□□□□ 0.42
IFT140-207ENST00000566052 CLTBP09497 229 aa17.65■□□□□ 0.42
IFT140-207ENST00000566052 TSPY3P0CV98 308 aa17.65■□□□□ 0.42
IFT140-207ENST00000566052 TSPY8P0CW00 308 aa17.65■□□□□ 0.42
IFT140-207ENST00000566052 ANKRD33Q7Z3H0 272 aa17.65■□□□□ 0.42
IFT140-207ENST00000566052 OTUD7AQ8TE49 926 aaPredicted RBP17.65■□□□□ 0.42
IFT140-207ENST00000566052 TOX2Q96NM4 488 aa17.65■□□□□ 0.42
IFT140-207ENST00000566052 RAVER2Q9HCJ3 691 aaKnown RBP17.65■□□□□ 0.42
IFT140-207ENST00000566052 SALL3Q9BXA9 1300 aa17.65■□□□□ 0.42
IFT140-207ENST00000566052 EYSQ5T1H1 3165 aa17.65■□□□□ 0.42
IFT140-207ENST00000566052 MOXD2PA6NHM9 499 aa17.64■□□□□ 0.41
IFT140-207ENST00000566052 BMP3P12645 472 aa17.64■□□□□ 0.41
IFT140-207ENST00000566052 ITGB8P26012 769 aa17.64■□□□□ 0.41
IFT140-207ENST00000566052 CST5P28325 142 aaPredicted RBP17.64■□□□□ 0.41
IFT140-207ENST00000566052 ACLYP53396 1101 aa17.64■□□□□ 0.41
IFT140-207ENST00000566052 PPARAQ07869 468 aa17.64■□□□□ 0.41
IFT140-207ENST00000566052 SLFN13Q68D06 897 aa17.64■□□□□ 0.41
IFT140-207ENST00000566052 LRRC47Q8N1G4 583 aaKnown RBP17.64■□□□□ 0.41
IFT140-207ENST00000566052 LENG1Q96BZ8 264 aaPredicted RBP17.64■□□□□ 0.41
IFT140-207ENST00000566052 GMCL1Q96IK5 515 aa17.64■□□□□ 0.41
IFT140-207ENST00000566052 FGD4Q96M96 766 aa17.64■□□□□ 0.41
IFT140-207ENST00000566052 FSD1Q9BTV5 496 aa17.64■□□□□ 0.41
IFT140-207ENST00000566052 NAPBQ9H115 298 aa17.64■□□□□ 0.41
IFT140-207ENST00000566052 ABHD16BQ9H3Z7 469 aa17.64■□□□□ 0.41
IFT140-207ENST00000566052 CTDP1Q9Y5B0 961 aaPredicted RBP17.64■□□□□ 0.41
IFT140-207ENST00000566052 CDH23Q9H251 3354 aa17.63■□□□□ 0.41
IFT140-207ENST00000566052 FOXP2O15409 715 aa17.63■□□□□ 0.41
IFT140-207ENST00000566052 PLA2G6O60733 806 aa17.63■□□□□ 0.41
IFT140-207ENST00000566052 MX1P20591 662 aa17.63■□□□□ 0.41
IFT140-207ENST00000566052 SMAD3P84022 425 aaKnown RBP17.63■□□□□ 0.41
IFT140-207ENST00000566052 TFAP4Q01664 338 aa17.63■□□□□ 0.41
IFT140-207ENST00000566052 ACVR2BQ13705 512 aa17.63■□□□□ 0.41
IFT140-207ENST00000566052 PPP4R3BQ5MIZ7 849 aa17.63■□□□□ 0.41
IFT140-207ENST00000566052 ANKRD35Q8N283 1001 aa17.63■□□□□ 0.41
IFT140-207ENST00000566052 NUP133Q8WUM0 1156 aa17.63■□□□□ 0.41
IFT140-207ENST00000566052 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms