RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 NUP133Q8WUM0 1156 aa14.69□□□□□ -0.06
SF3B3-206ENST00000565990 MTMR8Q96EF0 704 aa14.69□□□□□ -0.06
SF3B3-206ENST00000565990 LZTS2Q9BRK4 669 aa14.69□□□□□ -0.06
SF3B3-206ENST00000565990 LARP6Q9BRS8 491 aaKnown RBP14.69□□□□□ -0.06
SF3B3-206ENST00000565990 TANGO6Q9C0B7 1094 aa14.69□□□□□ -0.06
SF3B3-206ENST00000565990 RIOX1Q9H6W3 641 aa14.69□□□□□ -0.06
SF3B3-206ENST00000565990 GPCPD1Q9NPB8 672 aa14.69□□□□□ -0.06
SF3B3-206ENST00000565990 FBXO28Q9NVF7 368 aa14.69□□□□□ -0.06
SF3B3-206ENST00000565990 CHMP5Q9NZZ3 219 aa14.69□□□□□ -0.06
SF3B3-206ENST00000565990 BAZ2BQ9UIF8 2168 aaKnown RBP14.68□□□□□ -0.06
SF3B3-206ENST00000565990 FRMPD2Q68DX3 1309 aaPredicted RBP14.68□□□□□ -0.06
SF3B3-206ENST00000565990 ADGRA2Q96PE1 1338 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 KLRF2D3W0D1 207 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 TLR2O60603 784 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 PFKFB2O60825 505 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 FLOT1O75955 427 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 CYP2C8P10632 490 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 SLC4A3P48751 1232 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 MCM2P49736 904 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 GNAQP50148 359 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 HERVK_113P62684 666 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 ME3Q16798 604 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 NBPF11Q86T75 865 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 CHMP4CQ96CF2 233 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 ZSCAN31Q96LW9 406 aaPredicted RBP14.68□□□□□ -0.06
SF3B3-206ENST00000565990 PARK7Q99497 189 aaKnown RBP14.68□□□□□ -0.06
SF3B3-206ENST00000565990 SLF1Q9BQI6 1058 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 UBA5Q9GZZ9 404 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 RBM28Q9NW13 759 aaKnown RBP14.68□□□□□ -0.06
SF3B3-206ENST00000565990 WBP1LQ9NX94 342 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 SAGE1Q9NXZ1 904 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 RBPJLQ9UBG7 517 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 PRR12Q9ULL5 1215 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 MTMR7Q9Y216 660 aa14.68□□□□□ -0.06
SF3B3-206ENST00000565990 MYH6P13533 1939 aa14.67□□□□□ -0.06
SF3B3-206ENST00000565990 SMCHD1A6NHR9 2005 aa14.67□□□□□ -0.06
SF3B3-206ENST00000565990 CCDC196A0A1B0GTZ2 297 aa14.67□□□□□ -0.06
SF3B3-206ENST00000565990 SPDYE16A6NNV3 312 aaPredicted RBP14.67□□□□□ -0.06
SF3B3-206ENST00000565990 VWA5AO00534 786 aa14.67□□□□□ -0.06
SF3B3-206ENST00000565990 ATP2A1O14983 1001 aa14.67□□□□□ -0.06
SF3B3-206ENST00000565990 CYTH3O43739 400 aa14.67□□□□□ -0.06
SF3B3-206ENST00000565990 RXRAP19793 462 aa14.67□□□□□ -0.06
SF3B3-206ENST00000565990 CDC27P30260 824 aa14.67□□□□□ -0.06
SF3B3-206ENST00000565990 ADD1P35611 737 aaKnown RBP14.67□□□□□ -0.06
SF3B3-206ENST00000565990 SLC16A2P36021 539 aa14.67□□□□□ -0.06
SF3B3-206ENST00000565990 GCLCP48506 637 aaPredicted RBP14.67□□□□□ -0.06
SF3B3-206ENST00000565990 IRX3P78415 501 aaPredicted RBP14.67□□□□□ -0.06
SF3B3-206ENST00000565990 FUT2Q10981 343 aa14.67□□□□□ -0.06
SF3B3-206ENST00000565990 NTRK3Q16288 839 aa14.67□□□□□ -0.06
SF3B3-206ENST00000565990 SLC35G1Q2M3R5 365 aa14.67□□□□□ -0.06
SF3B3-206ENST00000565990 C17orf99Q6UX52 265 aa14.67□□□□□ -0.06
SF3B3-206ENST00000565990 ADGRF4Q8IZF3 695 aa14.67□□□□□ -0.06
SF3B3-206ENST00000565990 SRBD1Q8N5C6 995 aaKnown RBP14.67□□□□□ -0.06
SF3B3-206ENST00000565990 MB21D1Q8N884 522 aa14.67□□□□□ -0.06
SF3B3-206ENST00000565990 REPS2Q8NFH8 660 aa14.67□□□□□ -0.06
SF3B3-206ENST00000565990 GTF3C2Q8WUA4 911 aaPredicted RBP14.67□□□□□ -0.06
SF3B3-206ENST00000565990 SLC38A10Q9HBR0 1119 aa14.67□□□□□ -0.06
SF3B3-206ENST00000565990 ZFYVE28Q9HCC9 887 aa14.67□□□□□ -0.06
SF3B3-206ENST00000565990 A0A0G2JMZ2 1700 aa14.66□□□□□ -0.06
SF3B3-206ENST00000565990 TRPA1O75762 1119 aa14.66□□□□□ -0.06
SF3B3-206ENST00000565990 CNMDO75829 334 aa14.66□□□□□ -0.06
SF3B3-206ENST00000565990 CD2BP2O95400 341 aaKnown RBP14.66□□□□□ -0.06
SF3B3-206ENST00000565990 METAP2P50579 478 aaKnown RBP eCLIP14.66□□□□□ -0.06
SF3B3-206ENST00000565990 CRHR2Q13324 411 aa14.66□□□□□ -0.06
SF3B3-206ENST00000565990 TAF1CQ15572 869 aaPredicted RBP14.66□□□□□ -0.06
SF3B3-206ENST00000565990 RTN1Q16799 776 aa14.66□□□□□ -0.06
SF3B3-206ENST00000565990 CCDC96Q2M329 555 aa14.66□□□□□ -0.06
SF3B3-206ENST00000565990 NOM1Q5C9Z4 860 aaKnown RBP14.66□□□□□ -0.06
SF3B3-206ENST00000565990 L1TD1Q5T7N2 865 aaKnown RBP14.66□□□□□ -0.06
SF3B3-206ENST00000565990 TMTC3Q6ZXV5 915 aa14.66□□□□□ -0.06
SF3B3-206ENST00000565990 MICU3Q86XE3 530 aa14.66□□□□□ -0.06
SF3B3-206ENST00000565990 HSCBQ8IWL3 235 aa14.66□□□□□ -0.06
SF3B3-206ENST00000565990 PIAS4Q8N2W9 510 aaPredicted RBP14.66□□□□□ -0.06
SF3B3-206ENST00000565990 SPZ1Q9BXG8 430 aa14.66□□□□□ -0.06
SF3B3-206ENST00000565990 RANBP17Q9H2T7 1088 aaKnown RBP14.66□□□□□ -0.06
SF3B3-206ENST00000565990 R3HDMLQ9H3Y0 253 aa14.66□□□□□ -0.06
SF3B3-206ENST00000565990 JMJD4Q9H9V9 463 aa14.66□□□□□ -0.06
SF3B3-206ENST00000565990 ISY1Q9ULR0 285 aaKnown RBP14.66□□□□□ -0.06
SF3B3-206ENST00000565990 RABGAP1Q9Y3P9 1069 aa14.66□□□□□ -0.06
SF3B3-206ENST00000565990 GOLGA8BA8MQT2 603 aa14.65□□□□□ -0.06
SF3B3-206ENST00000565990 BCRP11274 1271 aa14.65□□□□□ -0.06
SF3B3-206ENST00000565990 OAZ1P54368 228 aa14.65□□□□□ -0.06
SF3B3-206ENST00000565990 CCT2P78371 535 aaKnown RBP14.65□□□□□ -0.06
SF3B3-206ENST00000565990 SCRN1Q12765 414 aa14.65□□□□□ -0.06
SF3B3-206ENST00000565990 Q3C1V9 767 aa14.65□□□□□ -0.06
SF3B3-206ENST00000565990 SYDE2Q5VT97 1194 aa14.65□□□□□ -0.06
SF3B3-206ENST00000565990 RAB11FIP4Q86YS3 637 aa14.65□□□□□ -0.06
SF3B3-206ENST00000565990 CCDC144CPQ8IYA2 1237 aa14.65□□□□□ -0.06
SF3B3-206ENST00000565990 ATG4CQ96DT6 458 aa14.65□□□□□ -0.06
SF3B3-206ENST00000565990 SLKQ9H2G2 1235 aaPredicted RBP14.65□□□□□ -0.06
SF3B3-206ENST00000565990 CPVLQ9H3G5 476 aa14.65□□□□□ -0.06
SF3B3-206ENST00000565990 TXNRD2Q9NNW7 524 aa14.65□□□□□ -0.06
SF3B3-206ENST00000565990 SH2B1Q9NRF2 756 aaPredicted RBP14.65□□□□□ -0.06
SF3B3-206ENST00000565990 BTBD7Q9P203 1132 aa14.65□□□□□ -0.06
SF3B3-206ENST00000565990 MORF4L1Q9UBU8 362 aa14.65□□□□□ -0.06
SF3B3-206ENST00000565990 ZNF536O15090 1300 aa14.65□□□□□ -0.06
SF3B3-206ENST00000565990 GOLGA8AA7E2F4 631 aa14.64□□□□□ -0.07
SF3B3-206ENST00000565990 ZBED4O75132 1171 aa14.64□□□□□ -0.07
SF3B3-206ENST00000565990 PLEKHA8P1O95397 391 aa14.64□□□□□ -0.07
SF3B3-206ENST00000565990 LARGE1O95461 756 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms