RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 PLCB4Q15147 1175 aa14.98□□□□□ -0.01
CX3CL1-204ENST00000565912 GDAP1L1Q96MZ0 367 aa14.98□□□□□ -0.01
CX3CL1-204ENST00000565912 DDX41Q9UJV9 622 aaKnown RBP14.98□□□□□ -0.01
CX3CL1-204ENST00000565912 PALM3A6NDB9 673 aaPredicted RBP14.98□□□□□ -0.01
CX3CL1-204ENST00000565912 ADKP55263 362 aaKnown RBP14.98□□□□□ -0.01
CX3CL1-204ENST00000565912 TSNAXIP1Q2TAA8 658 aa14.98□□□□□ -0.01
CX3CL1-204ENST00000565912 SH2D4BQ5SQS7 431 aa14.98□□□□□ -0.01
CX3CL1-204ENST00000565912 MYOCDQ8IZQ8 938 aa14.98□□□□□ -0.01
CX3CL1-204ENST00000565912 FAM193BQ96PV7 902 aaPredicted RBP14.98□□□□□ -0.01
CX3CL1-204ENST00000565912 RAB17Q9H0T7 212 aa14.98□□□□□ -0.01
CX3CL1-204ENST00000565912 GBP7Q8N8V2 638 aaPredicted RBP14.98□□□□□ -0.01
CX3CL1-204ENST00000565912 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.98□□□□□ -0.01
CX3CL1-204ENST00000565912 P3H4Q92791 437 aa14.98□□□□□ -0.01
CX3CL1-204ENST00000565912 TMEM2Q9UHN6 1383 aa14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 PTPROQ16827 1216 aa14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 FAM114A2Q9NRY5 505 aa14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 PARP2Q9UGN5 583 aa14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 USP21Q9UK80 565 aa14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 K7ENM7 598 aa14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 ZNF496Q96IT1 587 aaPredicted RBP14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 A6NNZ2 444 aa14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 POLR2MP0CAP2 368 aa14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 STX2P32856 288 aa14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 SCNN1DP51172 638 aa14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 GUCY2FP51841 1108 aa14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 GPR162Q16538 588 aa14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 TUBB8Q3ZCM7 444 aa14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 RIC8AQ9NPQ8 531 aa14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 THRAP3Q9Y2W1 955 aaKnown RBP14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 RBBP5Q15291 538 aaKnown RBP14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 NXNQ6DKJ4 435 aa14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 RSPH3Q86UC2 560 aa14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 LRRC47Q8N1G4 583 aaKnown RBP14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 ZSCAN10Q96SZ4 725 aaPredicted RBP14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 ADPGKQ9BRR6 497 aa14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 DSCC1Q9BVC3 393 aa14.97□□□□□ -0.01
CX3CL1-204ENST00000565912 HADHQ16836 314 aaKnown RBP14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 EDC3Q96F86 508 aaKnown RBP14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 ADCY8P40145 1251 aa14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 VPS41P49754 854 aa14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 KIF22Q14807 665 aa14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 BLIDQ8IZY5 108 aa14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 ANKRD35Q8N283 1001 aa14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 A0A1B0GUA9 196 aa14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 RGS16O15492 202 aaPredicted RBP14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 ATF7P17544 494 aaPredicted RBP14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 DOK7Q18PE1 504 aa14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 CAPN12Q6ZSI9 719 aa14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 NCAPG2Q86XI2 1143 aa14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 PCDHA12Q9UN75 941 aa14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 KCNJ18B7U540 433 aa14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 KCNK3O14649 394 aa14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 GOLGA8HP0CJ92 632 aa14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 KCNJ12Q14500 433 aa14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 POTEDQ86YR6 584 aa14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.96□□□□□ -0.017e-8■□□□□ 11.3
CX3CL1-204ENST00000565912 C1orf112Q9NSG2 853 aa14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 MRPL11Q9Y3B7 192 aaKnown RBP14.96□□□□□ -0.01
CX3CL1-204ENST00000565912 CHL1O00533 1208 aa14.96□□□□□ -0.02
CX3CL1-204ENST00000565912 DLATP10515 647 aaKnown RBP14.96□□□□□ -0.02
CX3CL1-204ENST00000565912 GYG1P46976 350 aa14.96□□□□□ -0.02
CX3CL1-204ENST00000565912 CTSWP56202 376 aa14.96□□□□□ -0.02
CX3CL1-204ENST00000565912 PPP4R1Q8TF05 950 aa14.96□□□□□ -0.02
CX3CL1-204ENST00000565912 KIF11P52732 1056 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 PPFIA1Q13136 1202 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 MUM1L1Q5H9M0 696 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 TAB3Q8N5C8 712 aaPredicted RBP14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 HESX1Q9UBX0 185 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 YEATS2Q9ULM3 1422 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 LTKP29376 864 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 IGBP1P78318 339 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 PHLDB2Q86SQ0 1253 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 KIAA0825Q8IV33 1275 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 PANK4Q9NVE7 773 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 KDRP35968 1356 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 CFAP65Q6ZU64 1925 aaKnown RBP14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 SYNJ2BP-COX16A0A087WUM0 186 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 ESYT2A0FGR8 921 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 RNF40O75150 1001 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 SDR42E1Q8WUS8 393 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 SCYL1Q96KG9 808 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 XPO4Q9C0E2 1151 aaKnown RBP14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 COX16Q9P0S2 106 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 CLGNO14967 610 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 TROVE2P10155 538 aaKnown RBP eCLIP14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 SAT1P21673 171 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 SAR1BQ9Y6B6 198 aa14.95□□□□□ -0.02
CX3CL1-204ENST00000565912 KRIT1O00522 736 aa14.94□□□□□ -0.02
CX3CL1-204ENST00000565912 CTNNA1P35221 906 aaKnown RBP14.94□□□□□ -0.02
CX3CL1-204ENST00000565912 BAG6P46379 1132 aa14.94□□□□□ -0.02
CX3CL1-204ENST00000565912 CERKLQ49MI3 558 aaPredicted RBP14.94□□□□□ -0.02
CX3CL1-204ENST00000565912 NME8Q8N427 588 aa14.94□□□□□ -0.02
CX3CL1-204ENST00000565912 BUB1O43683 1085 aa14.94□□□□□ -0.02
CX3CL1-204ENST00000565912 ATP5JP18859 108 aa14.94□□□□□ -0.02
CX3CL1-204ENST00000565912 MORC3Q14149 939 aa14.94□□□□□ -0.02
CX3CL1-204ENST00000565912 GSTA1P08263 222 aa14.94□□□□□ -0.02
CX3CL1-204ENST00000565912 GSTA2P09210 222 aa14.94□□□□□ -0.02
CX3CL1-204ENST00000565912 PHBP35232 272 aa14.94□□□□□ -0.02
CX3CL1-204ENST00000565912 CLNS1AP54105 237 aaKnown RBP14.94□□□□□ -0.02
CX3CL1-204ENST00000565912 CCDC13Q8IYE1 715 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms