RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 PCDHA11Q9Y5I1 949 aa13.65□□□□□ -0.22
CAPN3-215ENST00000565559 ELP1O95163 1332 aa13.64□□□□□ -0.23
CAPN3-215ENST00000565559 CACNA1AO00555 2505 aa13.64□□□□□ -0.23
CAPN3-215ENST00000565559 NUDT7P0C024 238 aa13.64□□□□□ -0.23
CAPN3-215ENST00000565559 FCER1AP12319 257 aa13.64□□□□□ -0.23
CAPN3-215ENST00000565559 POU3F3P20264 500 aaPredicted RBP13.64□□□□□ -0.23
CAPN3-215ENST00000565559 TIMM10P62072 90 aa13.64□□□□□ -0.23
CAPN3-215ENST00000565559 PLS1Q14651 629 aa13.64□□□□□ -0.23
CAPN3-215ENST00000565559 MB21D1Q8N884 522 aa13.64□□□□□ -0.23
CAPN3-215ENST00000565559 SPATA5Q8NB90 893 aa13.64□□□□□ -0.23
CAPN3-215ENST00000565559 OXER1Q8TDS5 423 aa13.64□□□□□ -0.23
CAPN3-215ENST00000565559 VTI1AQ96AJ9 217 aa13.64□□□□□ -0.23
CAPN3-215ENST00000565559 TANGO6Q9C0B7 1094 aa13.64□□□□□ -0.23
CAPN3-215ENST00000565559 AKAP2Q9Y2D5 859 aa13.64□□□□□ -0.23
CAPN3-215ENST00000565559 SALL2Q9Y467 1007 aaPredicted RBP13.64□□□□□ -0.23
CAPN3-215ENST00000565559 MTCH2Q9Y6C9 303 aa13.64□□□□□ -0.23
CAPN3-215ENST00000565559 ADAMTS4O75173 837 aa13.63□□□□□ -0.23
CAPN3-215ENST00000565559 RABGGTBP53611 331 aa13.63□□□□□ -0.23
CAPN3-215ENST00000565559 EMP3P54852 163 aa13.63□□□□□ -0.23
CAPN3-215ENST00000565559 KCNA10Q16322 511 aa13.63□□□□□ -0.23
CAPN3-215ENST00000565559 GORABQ5T7V8 394 aa13.63□□□□□ -0.23
CAPN3-215ENST00000565559 TBC1D9Q6ZT07 1266 aa13.63□□□□□ -0.23
CAPN3-215ENST00000565559 OTOP2Q7RTS6 562 aa13.63□□□□□ -0.23
CAPN3-215ENST00000565559 XAGE2Q96GT9 111 aa13.63□□□□□ -0.23
CAPN3-215ENST00000565559 TINF2Q9BSI4 451 aa13.63□□□□□ -0.23
CAPN3-215ENST00000565559 CABP5Q9NP86 173 aa13.63□□□□□ -0.23
CAPN3-215ENST00000565559 HMG20BQ9P0W2 317 aa13.63□□□□□ -0.23
CAPN3-215ENST00000565559 SLC4A7Q9Y6M7 1214 aa13.63□□□□□ -0.23
CAPN3-215ENST00000565559 A0A0U1RQG5 324 aaPredicted RBP13.62□□□□□ -0.23
CAPN3-215ENST00000565559 A0A1B0GUL7 405 aa13.62□□□□□ -0.23
CAPN3-215ENST00000565559 POTEMA6NI47 508 aa13.62□□□□□ -0.23
CAPN3-215ENST00000565559 ALADP13716 330 aa13.62□□□□□ -0.23
CAPN3-215ENST00000565559 CAMK2BQ13554 666 aa13.62□□□□□ -0.23
CAPN3-215ENST00000565559 ABCB5Q2M3G0 1257 aa13.62□□□□□ -0.23
CAPN3-215ENST00000565559 NAA16Q6N069 864 aaPredicted RBP13.62□□□□□ -0.23
CAPN3-215ENST00000565559 POTEGQ6S5H5 508 aa13.62□□□□□ -0.23
CAPN3-215ENST00000565559 PCSK9Q8NBP7 692 aaKnown RBP13.62□□□□□ -0.23
CAPN3-215ENST00000565559 ACER1Q8TDN7 264 aa13.62□□□□□ -0.23
CAPN3-215ENST00000565559 LENG1Q96BZ8 264 aaPredicted RBP13.62□□□□□ -0.23
CAPN3-215ENST00000565559 SAP30BPQ9UHR5 308 aaKnown RBP13.62□□□□□ -0.23
CAPN3-215ENST00000565559 SYNRGQ9UMZ2 1314 aa13.62□□□□□ -0.23
CAPN3-215ENST00000565559 LRRC37A2A6NM11 1700 aa13.61□□□□□ -0.23
CAPN3-215ENST00000565559 CHD7Q9P2D1 2997 aa13.61□□□□□ -0.23
CAPN3-215ENST00000565559 CYP2C18P33260 490 aa13.61□□□□□ -0.23
CAPN3-215ENST00000565559 CDK7P50613 346 aa13.61□□□□□ -0.23
CAPN3-215ENST00000565559 KCTD2Q14681 263 aa13.61□□□□□ -0.23
CAPN3-215ENST00000565559 E2F4Q16254 413 aa13.61□□□□□ -0.23
CAPN3-215ENST00000565559 CERKLQ49MI3 558 aaPredicted RBP13.61□□□□□ -0.23
CAPN3-215ENST00000565559 TATDN1Q6P1N9 297 aa13.61□□□□□ -0.23
CAPN3-215ENST00000565559 MMP19Q99542 508 aa13.61□□□□□ -0.23
CAPN3-215ENST00000565559 SPC25Q9HBM1 224 aa13.61□□□□□ -0.23
CAPN3-215ENST00000565559 FAM184BQ9ULE4 1060 aa13.61□□□□□ -0.23
CAPN3-215ENST00000565559 PTPRCP08575 1304 aa13.61□□□□□ -0.23
CAPN3-215ENST00000565559 SIPA1L1O43166 1804 aa13.6□□□□□ -0.23
CAPN3-215ENST00000565559 ZBBXA8MT70 800 aa13.6□□□□□ -0.23
CAPN3-215ENST00000565559 ARVCFO00192 962 aa13.6□□□□□ -0.23
CAPN3-215ENST00000565559 SLC25A27O95847 323 aa13.6□□□□□ -0.23
CAPN3-215ENST00000565559 ZNF865P0CJ78 1059 aaPredicted RBP13.6□□□□□ -0.23
CAPN3-215ENST00000565559 MYOGP15173 224 aa13.6□□□□□ -0.23
CAPN3-215ENST00000565559 ATP2A2P16615 1042 aaKnown RBP13.6□□□□□ -0.23
CAPN3-215ENST00000565559 TAL1P17542 331 aaPredicted RBP13.6□□□□□ -0.23
CAPN3-215ENST00000565559 PPP4CP60510 307 aa13.6□□□□□ -0.23
CAPN3-215ENST00000565559 TMEM67Q5HYA8 995 aa13.6□□□□□ -0.23
CAPN3-215ENST00000565559 PI16Q6UXB8 463 aa13.6□□□□□ -0.23
CAPN3-215ENST00000565559 FAM126BQ8IXS8 530 aa13.6□□□□□ -0.23
CAPN3-215ENST00000565559 KLHDC9Q8NEP7 349 aa13.6□□□□□ -0.23
CAPN3-215ENST00000565559 FBXL18Q96ME1 805 aa13.6□□□□□ -0.23
CAPN3-215ENST00000565559 NEUROD6Q96NK8 337 aa13.6□□□□□ -0.23
CAPN3-215ENST00000565559 SERPINB13Q9UIV8 391 aa13.6□□□□□ -0.23
CAPN3-215ENST00000565559 DIS3Q9Y2L1 958 aaKnown RBP13.6□□□□□ -0.23
CAPN3-215ENST00000565559 FAM205CA6NFA0 338 aa13.59□□□□□ -0.23
CAPN3-215ENST00000565559 RFXAPO00287 272 aa13.59□□□□□ -0.23
CAPN3-215ENST00000565559 UBTFL1P0CB47 393 aaPredicted RBP13.59□□□□□ -0.23
CAPN3-215ENST00000565559 SSTR3P32745 418 aaPredicted RBP13.59□□□□□ -0.23
CAPN3-215ENST00000565559 RPUSD2Q8IZ73 545 aaKnown RBP13.59□□□□□ -0.23
CAPN3-215ENST00000565559 GJD3Q8N144 294 aa13.59□□□□□ -0.23
CAPN3-215ENST00000565559 CDCA7LQ96GN5 454 aa13.59□□□□□ -0.23
CAPN3-215ENST00000565559 HIPK3Q9H422 1215 aa13.59□□□□□ -0.23
CAPN3-215ENST00000565559 COPRSQ9NQ92 184 aa13.59□□□□□ -0.23
CAPN3-215ENST00000565559 PA2G4Q9UQ80 394 aaKnown RBP13.59□□□□□ -0.23
CAPN3-215ENST00000565559 HDAC5Q9UQL6 1122 aa13.59□□□□□ -0.23
CAPN3-215ENST00000565559 PRRC2BQ5JSZ5 2229 aaKnown RBP13.59□□□□□ -0.23
CAPN3-215ENST00000565559 PGK2P07205 417 aa13.58□□□□□ -0.24
CAPN3-215ENST00000565559 ASGR1P07306 291 aa13.58□□□□□ -0.24
CAPN3-215ENST00000565559 CA3P07451 260 aa13.58□□□□□ -0.24
CAPN3-215ENST00000565559 C6orf222P0C671 652 aaPredicted RBP13.58□□□□□ -0.24
CAPN3-215ENST00000565559 CST5P28325 142 aaPredicted RBP13.58□□□□□ -0.24
CAPN3-215ENST00000565559 FOXK2Q01167 660 aa13.58□□□□□ -0.24
CAPN3-215ENST00000565559 CCSAPQ6IQ19 270 aaPredicted RBP13.58□□□□□ -0.24
CAPN3-215ENST00000565559 EHD4Q9H223 541 aa13.58□□□□□ -0.24
CAPN3-215ENST00000565559 CERS4Q9HA82 394 aa13.58□□□□□ -0.24
CAPN3-215ENST00000565559 CD320Q9NPF0 282 aa13.58□□□□□ -0.24
CAPN3-215ENST00000565559 ZHX1Q9UKY1 873 aaPredicted RBP13.58□□□□□ -0.24
CAPN3-215ENST00000565559 DUSP11O75319 330 aaKnown RBP13.57□□□□□ -0.24
CAPN3-215ENST00000565559 FLOT1O75955 427 aa13.57□□□□□ -0.24
CAPN3-215ENST00000565559 ARID4AP29374 1257 aaPredicted RBP13.57□□□□□ -0.24
CAPN3-215ENST00000565559 TTC6Q86TZ1 520 aa13.57□□□□□ -0.24
CAPN3-215ENST00000565559 MSL3Q8N5Y2 521 aaKnown RBP13.57□□□□□ -0.24
CAPN3-215ENST00000565559 ARNTL2Q8WYA1 636 aa13.57□□□□□ -0.24
CAPN3-215ENST00000565559 POTEB3A0JP26 581 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms