RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 EPHB3P54753 998 aa7.03□□□□□ -1.28
CHD9-215ENST00000565442 TEKQ02763 1124 aa7.03□□□□□ -1.28
CHD9-215ENST00000565442 PDE4BQ07343 736 aa7.03□□□□□ -1.28
CHD9-215ENST00000565442 CCDC84Q86UT8 332 aaPredicted RBP7.03□□□□□ -1.28
CHD9-215ENST00000565442 VPS37DQ86XT2 251 aa7.03□□□□□ -1.28
CHD9-215ENST00000565442 SIRT2Q8IXJ6 389 aa7.03□□□□□ -1.28
CHD9-215ENST00000565442 SP8Q8IXZ3 490 aa7.03□□□□□ -1.28
CHD9-215ENST00000565442 SREK1Q8WXA9 508 aaKnown RBP7.03□□□□□ -1.28
CHD9-215ENST00000565442 LINC01599Q8WXQ3 324 aa7.03□□□□□ -1.28
CHD9-215ENST00000565442 ACSF2Q96CM8 615 aaPredicted RBP7.03□□□□□ -1.28
CHD9-215ENST00000565442 NT5C1AQ9BXI3 368 aa7.03□□□□□ -1.28
CHD9-215ENST00000565442 SIRT5Q9NXA8 310 aa7.03□□□□□ -1.28
CHD9-215ENST00000565442 ARID5AQ03989 594 aa7.02□□□□□ -1.29
CHD9-215ENST00000565442 SEZ6Q53EL9 994 aa7.02□□□□□ -1.29
CHD9-215ENST00000565442 NLRX1Q86UT6 975 aa7.02□□□□□ -1.29
CHD9-215ENST00000565442 ZDHHC14Q8IZN3 488 aa7.02□□□□□ -1.29
CHD9-215ENST00000565442 CYB5D2Q8WUJ1 264 aa7.02□□□□□ -1.29
CHD9-215ENST00000565442 TANGO6Q9C0B7 1094 aa7.02□□□□□ -1.29
CHD9-215ENST00000565442 ADAM30Q9UKF2 790 aa7.02□□□□□ -1.29
CHD9-215ENST00000565442 NOTOA8MTQ0 251 aa7.01□□□□□ -1.29
CHD9-215ENST00000565442 N4BP3O15049 544 aa7.01□□□□□ -1.29
CHD9-215ENST00000565442 CILPO75339 1184 aa7.01□□□□□ -1.29
CHD9-215ENST00000565442 BPNT1O95861 308 aa7.01□□□□□ -1.29
CHD9-215ENST00000565442 ATF4P18848 351 aaPredicted RBP7.01□□□□□ -1.29
CHD9-215ENST00000565442 RASGRP4Q8TDF6 673 aa7.01□□□□□ -1.29
CHD9-215ENST00000565442 RNF141Q8WVD5 230 aa7.01□□□□□ -1.29
CHD9-215ENST00000565442 NKD1Q969G9 470 aa7.01□□□□□ -1.29
CHD9-215ENST00000565442 EPB41L4AQ9HCS5 686 aaPredicted RBP7.01□□□□□ -1.29
CHD9-215ENST00000565442 GINM1Q9NU53 330 aa7.01□□□□□ -1.29
CHD9-215ENST00000565442 EFR3BQ9Y2G0 817 aa7.01□□□□□ -1.29
CHD9-215ENST00000565442 LRRN2O75325 713 aa7□□□□□ -1.29
CHD9-215ENST00000565442 EFEMP2O95967 443 aa7□□□□□ -1.29
CHD9-215ENST00000565442 NASPP49321 788 aaPredicted RBP7□□□□□ -1.29
CHD9-215ENST00000565442 MPP2Q14168 576 aa7□□□□□ -1.29
CHD9-215ENST00000565442 SF3A1Q15459 793 aaKnown RBP7□□□□□ -1.29
CHD9-215ENST00000565442 VMACQ2NL98 169 aa7□□□□□ -1.29
CHD9-215ENST00000565442 DIEXFQ68CQ4 756 aaKnown RBP7□□□□□ -1.29
CHD9-215ENST00000565442 SYT8Q8NBV8 401 aa7□□□□□ -1.29
CHD9-215ENST00000565442 DRC1Q96MC2 740 aa7□□□□□ -1.29
CHD9-215ENST00000565442 TEPSINQ96N21 525 aa7□□□□□ -1.29
CHD9-215ENST00000565442 G6PC3Q9BUM1 346 aa7□□□□□ -1.29
CHD9-215ENST00000565442 ROBO2Q9HCK4 1378 aa6.99□□□□□ -1.29
CHD9-215ENST00000565442 VIPR1P32241 457 aa6.99□□□□□ -1.29
CHD9-215ENST00000565442 MCM4P33991 863 aa6.99□□□□□ -1.29
CHD9-215ENST00000565442 RPL6Q02878 288 aaKnown RBP6.99□□□□□ -1.29
CHD9-215ENST00000565442 ZXDCQ2QGD7 858 aaPredicted RBP6.99□□□□□ -1.29
CHD9-215ENST00000565442 CWF19L2Q2TBE0 894 aaKnown RBP6.99□□□□□ -1.29
CHD9-215ENST00000565442 SPATS1Q496A3 300 aa6.99□□□□□ -1.29
CHD9-215ENST00000565442 REC114Q7Z4M0 266 aa6.99□□□□□ -1.29
CHD9-215ENST00000565442 SPATA32Q96LK8 384 aa6.99□□□□□ -1.29
CHD9-215ENST00000565442 GMLQ99445 158 aa6.99□□□□□ -1.29
CHD9-215ENST00000565442 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.99□□□□□ -1.29
CHD9-215ENST00000565442 ADAM7Q9H2U9 754 aa6.99□□□□□ -1.29
CHD9-215ENST00000565442 CNTD2Q9H8S5 307 aa6.99□□□□□ -1.29
CHD9-215ENST00000565442 ZNF281Q9Y2X9 895 aa6.99□□□□□ -1.29
CHD9-215ENST00000565442 SHISA3A0PJX4 238 aa6.98□□□□□ -1.29
CHD9-215ENST00000565442 ZC3H12DA2A288 527 aaKnown RBP6.98□□□□□ -1.29
CHD9-215ENST00000565442 IRS4O14654 1257 aaPredicted RBP6.98□□□□□ -1.29
CHD9-215ENST00000565442 EFEMP1Q12805 493 aa6.98□□□□□ -1.29
CHD9-215ENST00000565442 MCF2L2Q86YR7 1114 aa6.98□□□□□ -1.29
CHD9-215ENST00000565442 SLITRK4Q8IW52 837 aa6.98□□□□□ -1.29
CHD9-215ENST00000565442 LRRC3Q9BY71 257 aa6.98□□□□□ -1.29
CHD9-215ENST00000565442 BRMS1Q9HCU9 246 aa6.98□□□□□ -1.29
CHD9-215ENST00000565442 LUC7LQ9NQ29 371 aaKnown RBP6.98□□□□□ -1.29
CHD9-215ENST00000565442 CRTAC1Q9NQ79 661 aa6.98□□□□□ -1.29
CHD9-215ENST00000565442 GRIN3BO60391 1043 aa6.97□□□□□ -1.29
CHD9-215ENST00000565442 USP2O75604 605 aaPredicted RBP6.97□□□□□ -1.29
CHD9-215ENST00000565442 FGRP09769 529 aa6.97□□□□□ -1.29
CHD9-215ENST00000565442 ATP2B1P20020 1258 aa6.97□□□□□ -1.29
CHD9-215ENST00000565442 CNKSR3Q6P9H4 555 aa6.97□□□□□ -1.29
CHD9-215ENST00000565442 GK5Q6ZS86 529 aa6.97□□□□□ -1.29
CHD9-215ENST00000565442 FAM13CQ8NE31 585 aa6.97□□□□□ -1.29
CHD9-215ENST00000565442 SEC16BQ96JE7 1060 aa6.97□□□□□ -1.29
CHD9-215ENST00000565442 PPT2Q9UMR5 302 aa6.97□□□□□ -1.29
CHD9-215ENST00000565442 POLR3KQ9Y2Y1 108 aaPredicted RBP6.97□□□□□ -1.29
CHD9-215ENST00000565442 NRDCO43847 1150 aa6.96□□□□□ -1.3
CHD9-215ENST00000565442 GTF2F1P35269 517 aaKnown RBP eCLIP6.96□□□□□ -1.3
CHD9-215ENST00000565442 SOX9P48436 509 aa6.96□□□□□ -1.3
CHD9-215ENST00000565442 CLCQ05315 142 aa6.96□□□□□ -1.3
CHD9-215ENST00000565442 CLEC16AQ2KHT3 1053 aa6.96□□□□□ -1.3
CHD9-215ENST00000565442 OLFML2BQ68BL8 750 aa6.96□□□□□ -1.3
CHD9-215ENST00000565442 CCDC81Q6ZN84 652 aa6.96□□□□□ -1.3
CHD9-215ENST00000565442 FAM129CQ86XR2 697 aa6.96□□□□□ -1.3
CHD9-215ENST00000565442 TMEFF1Q8IYR6 380 aa6.96□□□□□ -1.3
CHD9-215ENST00000565442 PCDHB14Q9Y5E9 798 aa6.96□□□□□ -1.3
CHD9-215ENST00000565442 CORINQ9Y5Q5 1042 aa6.96□□□□□ -1.3
CHD9-215ENST00000565442 UPK3BL1B0FP48 263 aa6.95□□□□□ -1.3
CHD9-215ENST00000565442 UPK3BL2E5RIL1 263 aa6.95□□□□□ -1.3
CHD9-215ENST00000565442 SSBP05455 408 aaKnown RBP eCLIP6.95□□□□□ -1.3
CHD9-215ENST00000565442 ZNF165P49910 485 aa6.95□□□□□ -1.3
CHD9-215ENST00000565442 CDR1P51861 262 aa6.95□□□□□ -1.3
CHD9-215ENST00000565442 YARSP54577 528 aaKnown RBP6.95□□□□□ -1.3
CHD9-215ENST00000565442 YBX1P67809 324 aaKnown RBP6.95□□□□□ -1.3
CHD9-215ENST00000565442 PLP2Q04941 152 aa6.95□□□□□ -1.3
CHD9-215ENST00000565442 FBXW10Q5XX13 1052 aa6.95□□□□□ -1.3
CHD9-215ENST00000565442 FRMD5Q7Z6J6 570 aa6.95□□□□□ -1.3
CHD9-215ENST00000565442 MZB1Q8WU39 189 aa6.95□□□□□ -1.3
CHD9-215ENST00000565442 CPLX3Q8WVH0 158 aa6.95□□□□□ -1.3
CHD9-215ENST00000565442 KREMEN1Q96MU8 473 aa6.95□□□□□ -1.3
CHD9-215ENST00000565442 ASPNQ9BXN1 380 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms