RNA–Protein interactions for RNA: ENST00000565296.5

CCNDBP1-206, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-206ENST00000565296 BRF1Q92994 677 aa16.21■□□□□ 0.19
CCNDBP1-206ENST00000565296 KIFC2Q96AC6 838 aa16.21■□□□□ 0.19
CCNDBP1-206ENST00000565296 CPVLQ9H3G5 476 aa16.21■□□□□ 0.19
CCNDBP1-206ENST00000565296 MAD2L2Q9UI95 211 aa16.21■□□□□ 0.19
CCNDBP1-206ENST00000565296 ISY1Q9ULR0 285 aaKnown RBP16.21■□□□□ 0.19
CCNDBP1-206ENST00000565296 PALM3A6NDB9 673 aaPredicted RBP16.2■□□□□ 0.18
CCNDBP1-206ENST00000565296 CCDC69A6NI79 296 aa16.2■□□□□ 0.18
CCNDBP1-206ENST00000565296 VWA5AO00534 786 aa16.2■□□□□ 0.18
CCNDBP1-206ENST00000565296 RXRAP19793 462 aa16.2■□□□□ 0.18
CCNDBP1-206ENST00000565296 GRM4Q14833 912 aa16.2■□□□□ 0.18
CCNDBP1-206ENST00000565296 Q3C1V9 767 aa16.2■□□□□ 0.18
CCNDBP1-206ENST00000565296 APOA5Q6Q788 366 aa16.2■□□□□ 0.18
CCNDBP1-206ENST00000565296 RAB11FIP4Q86YS3 637 aa16.2■□□□□ 0.18
CCNDBP1-206ENST00000565296 REPS2Q8NFH8 660 aa16.2■□□□□ 0.18
CCNDBP1-206ENST00000565296 ZNF296Q8WUU4 475 aaPredicted RBP16.2■□□□□ 0.18
CCNDBP1-206ENST00000565296 MORF4L1Q9UBU8 362 aa16.2■□□□□ 0.18
CCNDBP1-206ENST00000565296 SLC12A7Q9Y666 1083 aa16.2■□□□□ 0.18
CCNDBP1-206ENST00000565296 DDAH1O94760 285 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 PARP1P09874 1014 aaKnown RBP16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 CTCFP49711 727 aaPredicted RBP16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 APOBRQ0VD83 1088 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 SLC35G1Q2M3R5 365 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 ASPRV1Q53RT3 343 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 GPATCH4Q5T3I0 446 aaKnown RBP16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 FAM160B2Q86V87 743 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 PDRG1Q9NUG6 133 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 PRR12Q9ULL5 1215 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 HTTP42858 3142 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 LBX1P52954 281 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 EVCP57679 992 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 FGD1P98174 961 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 TMEM132BQ14DG7 1078 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 FAM110CQ1W6H9 321 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 CHURC1Q8WUH1 139 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 NUP133Q8WUM0 1156 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 MAP3K14Q99558 947 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 PAGR1Q9BTK6 254 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 UBA5Q9GZZ9 404 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 SLKQ9H2G2 1235 aaPredicted RBP16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 SLC38A10Q9HBR0 1119 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 RABGAP1Q9Y3P9 1069 aa16.19■□□□□ 0.18
CCNDBP1-206ENST00000565296 KLF18A0A0U1RQI7 1052 aa16.18■□□□□ 0.18
CCNDBP1-206ENST00000565296 CTGFP29279 349 aa16.18■□□□□ 0.18
CCNDBP1-206ENST00000565296 SNAP25P60880 206 aa16.18■□□□□ 0.18
CCNDBP1-206ENST00000565296 ERVK-9P63128 1117 aa16.18■□□□□ 0.18
CCNDBP1-206ENST00000565296 ERVK-24P63145 666 aa16.18■□□□□ 0.18
CCNDBP1-206ENST00000565296 SP3Q02447 781 aa16.18■□□□□ 0.18
CCNDBP1-206ENST00000565296 IKQ13123 557 aaPredicted RBP16.18■□□□□ 0.18
CCNDBP1-206ENST00000565296 NBPF11Q86T75 865 aa16.18■□□□□ 0.18
CCNDBP1-206ENST00000565296 MICU3Q86XE3 530 aa16.18■□□□□ 0.18
CCNDBP1-206ENST00000565296 CCDC144CPQ8IYA2 1237 aa16.18■□□□□ 0.18
CCNDBP1-206ENST00000565296 GPRC5AQ8NFJ5 357 aa16.18■□□□□ 0.18
CCNDBP1-206ENST00000565296 GTF3C2Q8WUA4 911 aaPredicted RBP16.18■□□□□ 0.18
CCNDBP1-206ENST00000565296 LARP6Q9BRS8 491 aaKnown RBP16.18■□□□□ 0.18
CCNDBP1-206ENST00000565296 ZNF214Q9UL59 606 aaPredicted RBP16.18■□□□□ 0.18
CCNDBP1-206ENST00000565296 HPS5Q9UPZ3 1129 aa16.18■□□□□ 0.18
CCNDBP1-206ENST00000565296 KLRF2D3W0D1 207 aa16.17■□□□□ 0.18
CCNDBP1-206ENST00000565296 SYDE2Q5VT97 1194 aa16.17■□□□□ 0.18
CCNDBP1-206ENST00000565296 HSCBQ8IWL3 235 aa16.17■□□□□ 0.18
CCNDBP1-206ENST00000565296 MB21D1Q8N884 522 aa16.17■□□□□ 0.18
CCNDBP1-206ENST00000565296 ARHGAP39Q9C0H5 1083 aa16.17■□□□□ 0.18
CCNDBP1-206ENST00000565296 ALDH8A1Q9H2A2 487 aaPredicted RBP16.17■□□□□ 0.18
CCNDBP1-206ENST00000565296 PARP14Q460N5 1801 aa16.17■□□□□ 0.18
CCNDBP1-206ENST00000565296 A0A0G2JMZ2 1700 aa16.17■□□□□ 0.18
CCNDBP1-206ENST00000565296 FKTNO75072 461 aa16.17■□□□□ 0.18
CCNDBP1-206ENST00000565296 NEK4P51957 841 aa16.17■□□□□ 0.18
CCNDBP1-206ENST00000565296 LACTBP83111 547 aaPredicted RBP16.17■□□□□ 0.18
CCNDBP1-206ENST00000565296 FANCBQ8NB91 859 aa16.17■□□□□ 0.18
CCNDBP1-206ENST00000565296 FAM217BQ9NTX9 383 aaPredicted RBP16.17■□□□□ 0.18
CCNDBP1-206ENST00000565296 ZNF536O15090 1300 aa16.16■□□□□ 0.18
CCNDBP1-206ENST00000565296 ZBTB43O43298 467 aa16.16■□□□□ 0.18
CCNDBP1-206ENST00000565296 CYTH3O43739 400 aa16.16■□□□□ 0.18
CCNDBP1-206ENST00000565296 CALM1P0DP23 149 aa16.16■□□□□ 0.18
CCNDBP1-206ENST00000565296 CALM2P0DP24 149 aa16.16■□□□□ 0.18
CCNDBP1-206ENST00000565296 CALM3P0DP25 149 aa16.16■□□□□ 0.18
CCNDBP1-206ENST00000565296 ADGRF4Q8IZF3 695 aa16.16■□□□□ 0.18
CCNDBP1-206ENST00000565296 SPATC1LQ9H0A9 340 aa16.16■□□□□ 0.18
CCNDBP1-206ENST00000565296 PORCNQ9H237 461 aa16.16■□□□□ 0.18
CCNDBP1-206ENST00000565296 RANBP17Q9H2T7 1088 aaKnown RBP16.16■□□□□ 0.18
CCNDBP1-206ENST00000565296 ECM2O94769 699 aaPredicted RBP16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 PLEKHA8P1O95397 391 aa16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 PDIA3P30101 505 aaKnown RBP16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 AK2P54819 239 aa16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 CMTR1Q8N1G2 835 aaKnown RBP16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 CTCFLQ8NI51 663 aaPredicted RBP16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 CD99L2Q8TCZ2 262 aa16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 SNX21Q969T3 373 aa16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 MOV10L1Q9BXT6 1211 aaKnown RBP16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 JMJD4Q9H9V9 463 aa16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 GOLGA8BA8MQT2 603 aa16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 ATP2A1O14983 1001 aa16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 ZBED4O75132 1171 aa16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 CDC27P30260 824 aa16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 RCAN1P53805 252 aa16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 SYNE3Q6ZMZ3 975 aa16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 SRBD1Q8N5C6 995 aaKnown RBP16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 TRIM47Q96LD4 638 aa16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 RAVER2Q9HCJ3 691 aaKnown RBP16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 TPCN1Q9ULQ1 816 aa16.15■□□□□ 0.18
CCNDBP1-206ENST00000565296 RIPK3Q9Y572 518 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms