RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 RLFQ13129 1914 aa16.97■□□□□ 0.31
COMMD4-211ENST00000564815 SYNGAP1Q96PV0 1343 aa16.96■□□□□ 0.31
COMMD4-211ENST00000564815 BAZ2AQ9UIF9 1905 aaKnown RBP16.96■□□□□ 0.31
COMMD4-211ENST00000564815 MOXD2PA6NHM9 499 aa16.96■□□□□ 0.31
COMMD4-211ENST00000564815 GSG1L2A8MUP6 293 aa16.96■□□□□ 0.31
COMMD4-211ENST00000564815 SMIM22K7EJ46 135 aa16.96■□□□□ 0.31
COMMD4-211ENST00000564815 ATP2A1O14983 1001 aa16.96■□□□□ 0.31
COMMD4-211ENST00000564815 SMARCA5O60264 1052 aaPredicted RBP16.96■□□□□ 0.31
COMMD4-211ENST00000564815 ZNF865P0CJ78 1059 aaPredicted RBP16.96■□□□□ 0.31
COMMD4-211ENST00000564815 FDX1P10109 184 aa16.96■□□□□ 0.31
COMMD4-211ENST00000564815 RASA1P20936 1047 aa16.96■□□□□ 0.31
COMMD4-211ENST00000564815 C9orf50Q5SZB4 431 aa16.96■□□□□ 0.31
COMMD4-211ENST00000564815 SH3RF1Q7Z6J0 888 aa16.96■□□□□ 0.31
COMMD4-211ENST00000564815 ZNF467Q7Z7K2 595 aaPredicted RBP16.96■□□□□ 0.31
COMMD4-211ENST00000564815 CPXCR1Q8N123 301 aa16.96■□□□□ 0.31
COMMD4-211ENST00000564815 STK11IPQ8N1F8 1099 aa16.96■□□□□ 0.31
COMMD4-211ENST00000564815 ANKRD35Q8N283 1001 aa16.96■□□□□ 0.31
COMMD4-211ENST00000564815 REPS2Q8NFH8 660 aa16.96■□□□□ 0.31
COMMD4-211ENST00000564815 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.96■□□□□ 0.31
COMMD4-211ENST00000564815 STARD7Q9NQZ5 370 aa16.96■□□□□ 0.31
COMMD4-211ENST00000564815 COL6A3P12111 3177 aa16.96■□□□□ 0.31
COMMD4-211ENST00000564815 A0A1W2PQ45 241 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-211ENST00000564815 A0A1W2PQY0 241 aa16.95■□□□□ 0.3
COMMD4-211ENST00000564815 PATL2C9JE40 543 aaKnown RBP16.95■□□□□ 0.3
COMMD4-211ENST00000564815 KIAA0355O15063 1070 aa16.95■□□□□ 0.3
COMMD4-211ENST00000564815 PQBP1O60828 265 aaKnown RBP16.95■□□□□ 0.3
COMMD4-211ENST00000564815 DUSP11O75319 330 aaKnown RBP16.95■□□□□ 0.3
COMMD4-211ENST00000564815 NDUFB10O96000 172 aa16.95■□□□□ 0.3
COMMD4-211ENST00000564815 CHGBP05060 677 aa16.95■□□□□ 0.3
COMMD4-211ENST00000564815 TAL1P17542 331 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-211ENST00000564815 PDE4BQ07343 736 aa16.95■□□□□ 0.3
COMMD4-211ENST00000564815 PPP4R3BQ5MIZ7 849 aa16.95■□□□□ 0.3
COMMD4-211ENST00000564815 CCDC174Q6PII3 467 aa16.95■□□□□ 0.3
COMMD4-211ENST00000564815 MAMDC4Q6UXC1 1216 aa16.95■□□□□ 0.3
COMMD4-211ENST00000564815 PCSK9Q8NBP7 692 aaKnown RBP16.95■□□□□ 0.3
COMMD4-211ENST00000564815 MKL1Q969V6 931 aa16.95■□□□□ 0.3
COMMD4-211ENST00000564815 VTI1AQ96AJ9 217 aa16.95■□□□□ 0.3
COMMD4-211ENST00000564815 RNPC3Q96LT9 517 aaKnown RBP16.95■□□□□ 0.3
COMMD4-211ENST00000564815 CDX2Q99626 313 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-211ENST00000564815 TTLL1O95922 423 aa16.94■□□□□ 0.3
COMMD4-211ENST00000564815 ACLYP53396 1101 aa16.94■□□□□ 0.3
COMMD4-211ENST00000564815 OAZ1P54368 228 aa16.94■□□□□ 0.3
COMMD4-211ENST00000564815 FPGSQ05932 587 aa16.94■□□□□ 0.3
COMMD4-211ENST00000564815 CHST13Q8NET6 341 aa16.94■□□□□ 0.3
COMMD4-211ENST00000564815 KIFC2Q96AC6 838 aa16.94■□□□□ 0.3
COMMD4-211ENST00000564815 GLT1D1Q96MS3 346 aa16.94■□□□□ 0.3
COMMD4-211ENST00000564815 NUP88Q99567 741 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-211ENST00000564815 ABHD16BQ9H3Z7 469 aa16.94■□□□□ 0.3
COMMD4-211ENST00000564815 DCTPP1Q9H773 170 aa16.94■□□□□ 0.3
COMMD4-211ENST00000564815 ZHX1Q9UKY1 873 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-211ENST00000564815 DNAH12Q6ZR08 3092 aa16.94■□□□□ 0.3
COMMD4-211ENST00000564815 MROH7Q68CQ1 1323 aa16.94■□□□□ 0.3
COMMD4-211ENST00000564815 A0A0G2JMZ2 1700 aa16.93■□□□□ 0.3
COMMD4-211ENST00000564815 TMEM265A0A087WTH1 108 aa16.93■□□□□ 0.3
COMMD4-211ENST00000564815 ERC2O15083 957 aa16.93■□□□□ 0.3
COMMD4-211ENST00000564815 GPAA1O43292 621 aa16.93■□□□□ 0.3
COMMD4-211ENST00000564815 ACVR2BQ13705 512 aa16.93■□□□□ 0.3
COMMD4-211ENST00000564815 KCNA10Q16322 511 aa16.93■□□□□ 0.3
COMMD4-211ENST00000564815 ANKRD33Q7Z3H0 272 aa16.93■□□□□ 0.3
COMMD4-211ENST00000564815 CHURC1Q8WUH1 139 aa16.93■□□□□ 0.3
COMMD4-211ENST00000564815 OSBP2Q969R2 916 aa16.93■□□□□ 0.3
COMMD4-211ENST00000564815 ISY1Q9ULR0 285 aaKnown RBP16.93■□□□□ 0.3
COMMD4-211ENST00000564815 A0A0C4DFX4 3053 aa16.93■□□□□ 0.3
COMMD4-211ENST00000564815 ELP1O95163 1332 aa16.93■□□□□ 0.3
COMMD4-211ENST00000564815 ROBO3Q96MS0 1386 aa16.92■□□□□ 0.3
COMMD4-211ENST00000564815 DNAJC25-GNG10A0A024R161 153 aa16.92■□□□□ 0.3
COMMD4-211ENST00000564815 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-211ENST00000564815 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-211ENST00000564815 ADAMTS4O75173 837 aa16.92■□□□□ 0.3
COMMD4-211ENST00000564815 SNAI1O95863 264 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-211ENST00000564815 C6orf222P0C671 652 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-211ENST00000564815 TSPY3P0CV98 308 aa16.92■□□□□ 0.3
COMMD4-211ENST00000564815 TSPY8P0CW00 308 aa16.92■□□□□ 0.3
COMMD4-211ENST00000564815 SLFN13Q68D06 897 aa16.92■□□□□ 0.3
COMMD4-211ENST00000564815 KLHDC9Q8NEP7 349 aa16.92■□□□□ 0.3
COMMD4-211ENST00000564815 SLC38A10Q9HBR0 1119 aa16.92■□□□□ 0.3
COMMD4-211ENST00000564815 RAVER2Q9HCJ3 691 aaKnown RBP16.92■□□□□ 0.3
COMMD4-211ENST00000564815 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-211ENST00000564815 MTMR4Q9NYA4 1195 aa16.92■□□□□ 0.3
COMMD4-211ENST00000564815 RIPK3Q9Y572 518 aa16.92■□□□□ 0.3
COMMD4-211ENST00000564815 BMP3P12645 472 aa16.91■□□□□ 0.3
COMMD4-211ENST00000564815 FAAP100Q0VG06 881 aa16.91■□□□□ 0.3
COMMD4-211ENST00000564815 GNASQ5JWF2 1037 aa16.91■□□□□ 0.3
COMMD4-211ENST00000564815 IFNL3Q8IZI9 196 aa16.91■□□□□ 0.3
COMMD4-211ENST00000564815 GMCL1P1Q8NEA9 526 aa16.91■□□□□ 0.3
COMMD4-211ENST00000564815 NEDD1Q8NHV4 660 aa16.91■□□□□ 0.3
COMMD4-211ENST00000564815 MAFAQ8NHW3 353 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-211ENST00000564815 CEP95Q96GE4 821 aa16.91■□□□□ 0.3
COMMD4-211ENST00000564815 SYNRGQ9UMZ2 1314 aa16.91■□□□□ 0.3
COMMD4-211ENST00000564815 IGKV6D-41A0A0C4DH26 115 aa16.9■□□□□ 0.3
COMMD4-211ENST00000564815 TLR3O15455 904 aaKnown RBP16.9■□□□□ 0.3
COMMD4-211ENST00000564815 PRDM1O75626 825 aa16.9■□□□□ 0.3
COMMD4-211ENST00000564815 TIMP1P01033 207 aa16.9■□□□□ 0.3
COMMD4-211ENST00000564815 IKQ13123 557 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-211ENST00000564815 NOL8Q76FK4 1167 aaKnown RBP16.9■□□□□ 0.3
COMMD4-211ENST00000564815 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.9■□□□□ 0.3
COMMD4-211ENST00000564815 FAM160B2Q86V87 743 aa16.9■□□□□ 0.3
COMMD4-211ENST00000564815 COL25A1Q9BXS0 654 aaPredicted RBP16.9■□□□□ 0.3
COMMD4-211ENST00000564815 NAPBQ9H115 298 aa16.9■□□□□ 0.3
COMMD4-211ENST00000564815 ZBTB47Q9UFB7 747 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms