RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 TMEM132EQ6IEE7 984 aa7.46□□□□□ -1.22
CHD9-212ENST00000564641 CEP128Q6ZU80 1094 aa7.46□□□□□ -1.22
CHD9-212ENST00000564641 ZNF605Q86T29 641 aa7.46□□□□□ -1.22
CHD9-212ENST00000564641 SMARCC1Q92922 1105 aaPredicted RBP7.46□□□□□ -1.22
CHD9-212ENST00000564641 SLC9A7Q96T83 725 aa7.46□□□□□ -1.22
CHD9-212ENST00000564641 TM9SF2Q99805 663 aa7.46□□□□□ -1.22
CHD9-212ENST00000564641 MCOLN1Q9GZU1 580 aa7.46□□□□□ -1.22
CHD9-212ENST00000564641 SUCOQ9UBS9 1254 aaKnown RBP7.46□□□□□ -1.22
CHD9-212ENST00000564641 USP2O75604 605 aaPredicted RBP7.45□□□□□ -1.22
CHD9-212ENST00000564641 DLG4P78352 724 aa7.45□□□□□ -1.22
CHD9-212ENST00000564641 OLFML2BQ68BL8 750 aa7.45□□□□□ -1.22
CHD9-212ENST00000564641 SPATA32Q96LK8 384 aa7.45□□□□□ -1.22
CHD9-212ENST00000564641 FERD3LQ96RJ6 166 aa7.45□□□□□ -1.22
CHD9-212ENST00000564641 ANTXR1Q9H6X2 564 aa7.45□□□□□ -1.22
CHD9-212ENST00000564641 KCNK12Q9HB15 430 aa7.45□□□□□ -1.22
CHD9-212ENST00000564641 FBXL21Q9UKT6 434 aa7.45□□□□□ -1.22
CHD9-212ENST00000564641 WTIPA6NIX2 430 aaPredicted RBP7.44□□□□□ -1.22
CHD9-212ENST00000564641 NOTOA8MTQ0 251 aa7.44□□□□□ -1.22
CHD9-212ENST00000564641 PNLIPP16233 465 aa7.44□□□□□ -1.22
CHD9-212ENST00000564641 RTP1P59025 263 aa7.44□□□□□ -1.22
CHD9-212ENST00000564641 LINC00310P59036 64 aa7.44□□□□□ -1.22
CHD9-212ENST00000564641 GALNT18Q6P9A2 607 aa7.44□□□□□ -1.22
CHD9-212ENST00000564641 RNF34Q969K3 372 aa7.44□□□□□ -1.22
CHD9-212ENST00000564641 HHIPL1Q96JK4 782 aa7.44□□□□□ -1.22
CHD9-212ENST00000564641 ZNF512BQ96KM6 892 aaPredicted RBP7.44□□□□□ -1.22
CHD9-212ENST00000564641 MYOCOSA0A1B0GUC4 107 aa7.43□□□□□ -1.22
CHD9-212ENST00000564641 ABLIM1O14639 778 aa7.43□□□□□ -1.22
CHD9-212ENST00000564641 NUAK1O60285 661 aa7.43□□□□□ -1.22
CHD9-212ENST00000564641 FKTNO75072 461 aa7.43□□□□□ -1.22
CHD9-212ENST00000564641 GSNP06396 782 aa7.43□□□□□ -1.22
CHD9-212ENST00000564641 ARL4AP40617 200 aa7.43□□□□□ -1.22
CHD9-212ENST00000564641 COL9A2Q14055 689 aaPredicted RBP7.43□□□□□ -1.22
CHD9-212ENST00000564641 ANKRD39Q53RE8 183 aa7.43□□□□□ -1.22
CHD9-212ENST00000564641 ADGRF1Q5T601 910 aa7.43□□□□□ -1.22
CHD9-212ENST00000564641 C7orf61Q8IZ16 206 aa7.43□□□□□ -1.22
CHD9-212ENST00000564641 RBBP8NLQ8NC74 664 aaPredicted RBP7.43□□□□□ -1.22
CHD9-212ENST00000564641 A0A1W2PQ45 241 aaPredicted RBP7.42□□□□□ -1.22
CHD9-212ENST00000564641 A0A1W2PQY0 241 aa7.42□□□□□ -1.22
CHD9-212ENST00000564641 ZNF205O95201 554 aa7.42□□□□□ -1.22
CHD9-212ENST00000564641 VAMP1P23763 118 aa7.42□□□□□ -1.22
CHD9-212ENST00000564641 PMS1P54277 932 aaKnown RBP7.42□□□□□ -1.22
CHD9-212ENST00000564641 MFAP1P55081 439 aaKnown RBP7.42□□□□□ -1.22
CHD9-212ENST00000564641 LAPTM5Q13571 262 aa7.42□□□□□ -1.22
CHD9-212ENST00000564641 LCNL1Q6ZST4 164 aa7.42□□□□□ -1.22
CHD9-212ENST00000564641 CCDC144CPQ8IYA2 1237 aa7.42□□□□□ -1.22
CHD9-212ENST00000564641 DSCC1Q9BVC3 393 aa7.42□□□□□ -1.22
CHD9-212ENST00000564641 GFOD1Q9NXC2 390 aa7.42□□□□□ -1.22
CHD9-212ENST00000564641 RAPGEFL1Q9UHV5 662 aa7.42□□□□□ -1.22
CHD9-212ENST00000564641 TAF6LQ9Y6J9 622 aa7.42□□□□□ -1.22
CHD9-212ENST00000564641 FADS2P1A8MWK0 482 aa7.41□□□□□ -1.22
CHD9-212ENST00000564641 RFXAPO00287 272 aa7.41□□□□□ -1.22
CHD9-212ENST00000564641 SCAMP3O14828 347 aaKnown RBP7.41□□□□□ -1.22
CHD9-212ENST00000564641 VAV1P15498 845 aa7.41□□□□□ -1.22
CHD9-212ENST00000564641 TMEM62Q0P6H9 643 aa7.41□□□□□ -1.22
CHD9-212ENST00000564641 CWF19L1Q69YN2 538 aaKnown RBP7.41□□□□□ -1.22
CHD9-212ENST00000564641 CDADC1Q9BWV3 514 aa7.41□□□□□ -1.22
CHD9-212ENST00000564641 DDX41Q9UJV9 622 aaKnown RBP7.41□□□□□ -1.22
CHD9-212ENST00000564641 ACRP10323 421 aa7.4□□□□□ -1.22
CHD9-212ENST00000564641 GUCY2CP25092 1073 aa7.4□□□□□ -1.22
CHD9-212ENST00000564641 CTSKP43235 329 aa7.4□□□□□ -1.22
CHD9-212ENST00000564641 ZNF394Q53GI3 561 aa7.4□□□□□ -1.22
CHD9-212ENST00000564641 ZNF385BQ569K4 471 aa7.4□□□□□ -1.22
CHD9-212ENST00000564641 SIRT2Q8IXJ6 389 aa7.4□□□□□ -1.22
CHD9-212ENST00000564641 ERVK13-1Q9NX77 482 aa7.4□□□□□ -1.22
CHD9-212ENST00000564641 SIRT5Q9NXA8 310 aa7.4□□□□□ -1.22
CHD9-212ENST00000564641 CNOT6Q9ULM6 557 aaKnown RBP7.4□□□□□ -1.22
CHD9-212ENST00000564641 MEIS1O00470 390 aa7.39□□□□□ -1.23
CHD9-212ENST00000564641 MPOP05164 745 aa7.39□□□□□ -1.23
CHD9-212ENST00000564641 ERVFRD-1P60508 538 aa7.39□□□□□ -1.23
CHD9-212ENST00000564641 NOL9Q5SY16 702 aaKnown RBP7.39□□□□□ -1.23
CHD9-212ENST00000564641 FBXW10Q5XX13 1052 aa7.39□□□□□ -1.23
CHD9-212ENST00000564641 TMEM151BQ8IW70 566 aa7.39□□□□□ -1.23
CHD9-212ENST00000564641 ZNF654Q8IZM8 581 aa7.39□□□□□ -1.23
CHD9-212ENST00000564641 NOP2P46087 812 aaKnown RBP7.38□□□□□ -1.23
CHD9-212ENST00000564641 GALK1P51570 392 aa7.38□□□□□ -1.23
CHD9-212ENST00000564641 YBX1P67809 324 aaKnown RBP7.38□□□□□ -1.23
CHD9-212ENST00000564641 SRSF3P84103 164 aaKnown RBP7.38□□□□□ -1.23
CHD9-212ENST00000564641 HSF5Q4G112 596 aaPredicted RBP7.38□□□□□ -1.23
CHD9-212ENST00000564641 ZPBP2Q6X784 338 aa7.38□□□□□ -1.23
CHD9-212ENST00000564641 SLCO6A1Q86UG4 719 aa7.38□□□□□ -1.23
CHD9-212ENST00000564641 CRBNQ96SW2 442 aa7.38□□□□□ -1.23
CHD9-212ENST00000564641 GCM1Q9NP62 436 aa7.38□□□□□ -1.23
CHD9-212ENST00000564641 MINPP1Q9UNW1 487 aa7.38□□□□□ -1.23
CHD9-212ENST00000564641 GPR55Q9Y2T6 319 aaPredicted RBP7.38□□□□□ -1.23
CHD9-212ENST00000564641 PCDHGB7Q9Y5F8 929 aa7.38□□□□□ -1.23
CHD9-212ENST00000564641 SLC12A7Q9Y666 1083 aa7.38□□□□□ -1.23
CHD9-212ENST00000564641 C9IYK1 514 aa7.37□□□□□ -1.23
CHD9-212ENST00000564641 SHOXO15266 292 aa7.37□□□□□ -1.23
CHD9-212ENST00000564641 CRTC3Q6UUV7 619 aa7.37□□□□□ -1.23
CHD9-212ENST00000564641 PLCD4Q9BRC7 762 aa7.37□□□□□ -1.23
CHD9-212ENST00000564641 SRRTQ9BXP5 876 aaKnown RBP7.37□□□□□ -1.23
CHD9-212ENST00000564641 IRF2BPLQ9H1B7 796 aa7.37□□□□□ -1.23
CHD9-212ENST00000564641 ACSL6Q9UKU0 697 aa7.37□□□□□ -1.23
CHD9-212ENST00000564641 SF3B6Q9Y3B4 125 aaKnown RBP7.37□□□□□ -1.23
CHD9-212ENST00000564641 FHOD1Q9Y613 1164 aa7.37□□□□□ -1.23
CHD9-212ENST00000564641 A0A087WZG4 1122 aa7.36□□□□□ -1.23
CHD9-212ENST00000564641 EFEMP2O95967 443 aa7.36□□□□□ -1.23
CHD9-212ENST00000564641 RACK1P63244 317 aaKnown RBP7.36□□□□□ -1.23
CHD9-212ENST00000564641 CYP4F8P98187 520 aa7.36□□□□□ -1.23
CHD9-212ENST00000564641 TCERG1LQ5VWI1 586 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms