RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 RNF20Q5VTR2 975 aa20.31■□□□□ 0.84
USB1-209ENST00000564387 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.31■□□□□ 0.84
USB1-209ENST00000564387 RAET1EQ8TD07 263 aa20.31■□□□□ 0.84
USB1-209ENST00000564387 IGDCC4Q8TDY8 1250 aa20.31■□□□□ 0.84
USB1-209ENST00000564387 ZNF333Q96JL9 665 aa20.31■□□□□ 0.84
USB1-209ENST00000564387 NUDT12Q9BQG2 462 aa20.31■□□□□ 0.84
USB1-209ENST00000564387 ZNF236Q9UL36 1845 aa20.31■□□□□ 0.84
USB1-209ENST00000564387 SLC15A5A6NIM6 579 aa20.3■□□□□ 0.84
USB1-209ENST00000564387 REC8O95072 547 aa20.3■□□□□ 0.84
USB1-209ENST00000564387 HOXC6P09630 235 aa20.3■□□□□ 0.84
USB1-209ENST00000564387 ERCC3P19447 782 aa20.3■□□□□ 0.84
USB1-209ENST00000564387 GRK4P32298 578 aa20.3■□□□□ 0.84
USB1-209ENST00000564387 COPB2P35606 906 aa20.3■□□□□ 0.84
USB1-209ENST00000564387 SLC9C1Q4G0N8 1177 aa20.3■□□□□ 0.84
USB1-209ENST00000564387 NBPF11Q86T75 865 aa20.3■□□□□ 0.84
USB1-209ENST00000564387 CCAR1Q8IX12 1150 aaKnown RBP20.3■□□□□ 0.84
USB1-209ENST00000564387 RASEFQ8IZ41 740 aa20.3■□□□□ 0.84
USB1-209ENST00000564387 ABRAQ8N0Z2 381 aa20.3■□□□□ 0.84
USB1-209ENST00000564387 SLAIN1Q8ND83 568 aa20.3■□□□□ 0.84
USB1-209ENST00000564387 KIFC2Q96AC6 838 aa20.3■□□□□ 0.84
USB1-209ENST00000564387 TEX13BQ9BXU2 312 aa20.3■□□□□ 0.84
USB1-209ENST00000564387 KAT14Q9H8E8 782 aa20.3■□□□□ 0.84
USB1-209ENST00000564387 PRR12Q9ULL5 1215 aa20.3■□□□□ 0.84
USB1-209ENST00000564387 ZNF536O15090 1300 aa20.29■□□□□ 0.84
USB1-209ENST00000564387 ADCY3O60266 1144 aa20.29■□□□□ 0.84
USB1-209ENST00000564387 ZBED4O75132 1171 aa20.29■□□□□ 0.84
USB1-209ENST00000564387 IGHA2P01877 340 aa20.29■□□□□ 0.84
USB1-209ENST00000564387 HSPA4P34932 840 aa20.29■□□□□ 0.84
USB1-209ENST00000564387 COL9A3Q14050 684 aaPredicted RBP20.29■□□□□ 0.84
USB1-209ENST00000564387 GPATCH4Q5T3I0 446 aaKnown RBP20.29■□□□□ 0.84
USB1-209ENST00000564387 IFIT1BQ5T764 474 aaKnown RBP20.29■□□□□ 0.84
USB1-209ENST00000564387 TTBK2Q6IQ55 1244 aa20.29■□□□□ 0.84
USB1-209ENST00000564387 SAMD1Q6SPF0 538 aaPredicted RBP20.28■□□□□ 0.84
USB1-209ENST00000564387 RANBP17Q9H2T7 1088 aaKnown RBP20.28■□□□□ 0.84
USB1-209ENST00000564387 IFIT3O14879 490 aaKnown RBP20.27■□□□□ 0.84
USB1-209ENST00000564387 MCM5P33992 734 aa20.27■□□□□ 0.84
USB1-209ENST00000564387 MAP2K5Q13163 448 aa20.27■□□□□ 0.84
USB1-209ENST00000564387 PLS1Q14651 629 aa20.27■□□□□ 0.84
USB1-209ENST00000564387 SART3Q15020 963 aaKnown RBP20.27■□□□□ 0.84
USB1-209ENST00000564387 CCDC96Q2M329 555 aa20.27■□□□□ 0.84
USB1-209ENST00000564387 SH3TC2Q8TF17 1288 aa20.27■□□□□ 0.84
USB1-209ENST00000564387 SENP2Q9HC62 589 aa20.27■□□□□ 0.84
USB1-209ENST00000564387 RIPK3Q9Y572 518 aa20.27■□□□□ 0.84
USB1-209ENST00000564387 IVNS1ABPQ9Y6Y0 642 aa20.27■□□□□ 0.84
USB1-209ENST00000564387 WDR19Q8NEZ3 1342 aa20.27■□□□□ 0.83
USB1-209ENST00000564387 CCDC85CA6NKD9 419 aa20.26■□□□□ 0.83
USB1-209ENST00000564387 RGS2P41220 211 aa20.26■□□□□ 0.83
USB1-209ENST00000564387 EXOSC10Q01780 885 aaKnown RBP20.26■□□□□ 0.83
USB1-209ENST00000564387 TROAPQ12815 778 aa20.26■□□□□ 0.83
USB1-209ENST00000564387 KRT32Q14532 448 aa20.26■□□□□ 0.83
USB1-209ENST00000564387 ASPRV1Q53RT3 343 aa20.26■□□□□ 0.83
USB1-209ENST00000564387 SYDE2Q5VT97 1194 aa20.26■□□□□ 0.83
USB1-209ENST00000564387 SNRNP48Q6IEG0 339 aaKnown RBP20.26■□□□□ 0.83
USB1-209ENST00000564387 CHST3Q7LGC8 479 aa20.26■□□□□ 0.83
USB1-209ENST00000564387 NCAPG2Q86XI2 1143 aa20.26■□□□□ 0.83
USB1-209ENST00000564387 TRMT44Q8IYL2 757 aaKnown RBP20.26■□□□□ 0.83
USB1-209ENST00000564387 CHMP4CQ96CF2 233 aa20.26■□□□□ 0.83
USB1-209ENST00000564387 TMEM87BQ96K49 555 aa20.26■□□□□ 0.83
USB1-209ENST00000564387 APBA2Q99767 749 aa20.26■□□□□ 0.83
USB1-209ENST00000564387 LY9Q9HBG7 655 aa20.26■□□□□ 0.83
USB1-209ENST00000564387 MTMR7Q9Y216 660 aa20.26■□□□□ 0.83
USB1-209ENST00000564387 FRMPD2Q68DX3 1309 aaPredicted RBP20.26■□□□□ 0.83
USB1-209ENST00000564387 ERICH2A1L162 156 aa20.25■□□□□ 0.83
USB1-209ENST00000564387 PRC1O43663 620 aa20.25■□□□□ 0.83
USB1-209ENST00000564387 ELNP15502 786 aa20.25■□□□□ 0.83
USB1-209ENST00000564387 ZKSCAN1P17029 563 aaPredicted RBP20.25■□□□□ 0.83
USB1-209ENST00000564387 SLC16A2P36021 539 aa20.25■□□□□ 0.83
USB1-209ENST00000564387 WTAPQ15007 396 aa20.25■□□□□ 0.83
USB1-209ENST00000564387 ADCK5Q3MIX3 580 aa20.25■□□□□ 0.83
USB1-209ENST00000564387 TMEM67Q5HYA8 995 aa20.25■□□□□ 0.83
USB1-209ENST00000564387 NEK1Q96PY6 1258 aa20.25■□□□□ 0.83
USB1-209ENST00000564387 USP26Q9BXU7 913 aa20.25■□□□□ 0.83
USB1-209ENST00000564387 RAVER2Q9HCJ3 691 aaKnown RBP20.25■□□□□ 0.83
USB1-209ENST00000564387 GPCPD1Q9NPB8 672 aa20.25■□□□□ 0.83
USB1-209ENST00000564387 RBBP6Q7Z6E9 1792 aaKnown RBP20.24■□□□□ 0.83
USB1-209ENST00000564387 PALM3A6NDB9 673 aaPredicted RBP20.24■□□□□ 0.83
USB1-209ENST00000564387 COBLO75128 1261 aa20.24■□□□□ 0.83
USB1-209ENST00000564387 FCER1AP12319 257 aa20.24■□□□□ 0.83
USB1-209ENST00000564387 CYP2B6P20813 491 aa20.24■□□□□ 0.83
USB1-209ENST00000564387 ADORA2AP29274 412 aa20.24■□□□□ 0.83
USB1-209ENST00000564387 LIFRP42702 1097 aa20.24■□□□□ 0.83
USB1-209ENST00000564387 IKQ13123 557 aaPredicted RBP20.24■□□□□ 0.83
USB1-209ENST00000564387 MAP3K21Q5TCX8 1036 aa20.24■□□□□ 0.83
USB1-209ENST00000564387 WDR78Q5VTH9 848 aa20.24■□□□□ 0.83
USB1-209ENST00000564387 CPXCR1Q8N123 301 aa20.24■□□□□ 0.83
USB1-209ENST00000564387 TMTC2Q8N394 836 aa20.24■□□□□ 0.83
USB1-209ENST00000564387 CHST13Q8NET6 341 aa20.24■□□□□ 0.83
USB1-209ENST00000564387 TRIB2Q92519 343 aa20.24■□□□□ 0.83
USB1-209ENST00000564387 MAP3K14Q99558 947 aa20.24■□□□□ 0.83
USB1-209ENST00000564387 BRCA2P51587 3418 aa20.24■□□□□ 0.83
USB1-209ENST00000564387 SH2B2O14492 632 aaPredicted RBP20.23■□□□□ 0.83
USB1-209ENST00000564387 HMGCRP04035 888 aa20.23■□□□□ 0.83
USB1-209ENST00000564387 ICAM1P05362 532 aa20.23■□□□□ 0.83
USB1-209ENST00000564387 PARP1P09874 1014 aaKnown RBP20.23■□□□□ 0.83
USB1-209ENST00000564387 GOLGA8HP0CJ92 632 aa20.23■□□□□ 0.83
USB1-209ENST00000564387 RGS19P49795 217 aa20.23■□□□□ 0.83
USB1-209ENST00000564387 TKFCQ3LXA3 575 aa20.23■□□□□ 0.83
USB1-209ENST00000564387 DHX32Q7L7V1 743 aaKnown RBP20.23■□□□□ 0.83
USB1-209ENST00000564387 SGMS1Q86VZ5 419 aa20.23■□□□□ 0.83
USB1-209ENST00000564387 NPLOC4Q8TAT6 608 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms