RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 SNRNP48Q6IEG0 339 aaKnown RBP23.64■■□□□ 1.37
SHCBP1-203ENST00000564272 RASGRP2Q7LDG7 609 aa23.64■■□□□ 1.37
SHCBP1-203ENST00000564272 NECAB2Q7Z6G3 386 aa23.64■■□□□ 1.37
SHCBP1-203ENST00000564272 TBC1D10CQ8IV04 446 aa23.64■■□□□ 1.37
SHCBP1-203ENST00000564272 TRPV1Q8NER1 839 aa23.64■■□□□ 1.37
SHCBP1-203ENST00000564272 TEX13BQ9BXU2 312 aa23.64■■□□□ 1.37
SHCBP1-203ENST00000564272 ZNFX1Q9P2E3 1918 aaKnown RBP23.64■■□□□ 1.37
SHCBP1-203ENST00000564272 CEP290O15078 2479 aa23.64■■□□□ 1.37
SHCBP1-203ENST00000564272 LAMA4Q16363 1823 aa23.63■■□□□ 1.37
SHCBP1-203ENST00000564272 ALPK3Q96L96 1907 aa23.63■■□□□ 1.37
SHCBP1-203ENST00000564272 PGK2P07205 417 aa23.63■■□□□ 1.37
SHCBP1-203ENST00000564272 PPP4R3BQ5MIZ7 849 aa23.63■■□□□ 1.37
SHCBP1-203ENST00000564272 TTC22Q5TAA0 569 aa23.63■■□□□ 1.37
SHCBP1-203ENST00000564272 SLC5A4Q9NY91 659 aa23.63■■□□□ 1.37
SHCBP1-203ENST00000564272 TMEM232C9JQI7 657 aa23.62■■□□□ 1.37
SHCBP1-203ENST00000564272 HIP1O00291 1037 aa23.62■■□□□ 1.37
SHCBP1-203ENST00000564272 ZBED4O75132 1171 aa23.62■■□□□ 1.37
SHCBP1-203ENST00000564272 CYBAP13498 195 aa23.62■■□□□ 1.37
SHCBP1-203ENST00000564272 MCCP23508 829 aa23.62■■□□□ 1.37
SHCBP1-203ENST00000564272 COPB2P35606 906 aa23.62■■□□□ 1.37
SHCBP1-203ENST00000564272 CPXCR1Q8N123 301 aa23.62■■□□□ 1.37
SHCBP1-203ENST00000564272 GMCL1Q96IK5 515 aa23.62■■□□□ 1.37
SHCBP1-203ENST00000564272 MAML3Q96JK9 1138 aa23.62■■□□□ 1.37
SHCBP1-203ENST00000564272 SLC38A10Q9HBR0 1119 aa23.62■■□□□ 1.37
SHCBP1-203ENST00000564272 RAVER2Q9HCJ3 691 aaKnown RBP23.62■■□□□ 1.37
SHCBP1-203ENST00000564272 MTMR7Q9Y216 660 aa23.62■■□□□ 1.37
SHCBP1-203ENST00000564272 RIPK3Q9Y572 518 aa23.62■■□□□ 1.37
SHCBP1-203ENST00000564272 CNGA1P29973 690 aa23.61■■□□□ 1.37
SHCBP1-203ENST00000564272 SLC1A4P43007 532 aa23.61■■□□□ 1.37
SHCBP1-203ENST00000564272 SLC4A3P48751 1232 aa23.61■■□□□ 1.37
SHCBP1-203ENST00000564272 KCTD2Q14681 263 aa23.61■■□□□ 1.37
SHCBP1-203ENST00000564272 CTDP1Q9Y5B0 961 aaPredicted RBP23.61■■□□□ 1.37
SHCBP1-203ENST00000564272 PLXNA1Q9UIW2 1896 aa23.61■■□□□ 1.37
SHCBP1-203ENST00000564272 NOVP48745 357 aa23.6■■□□□ 1.37
SHCBP1-203ENST00000564272 STAT2P52630 851 aa23.6■■□□□ 1.37
SHCBP1-203ENST00000564272 AKNAD1Q5T1N1 836 aa23.6■■□□□ 1.37
SHCBP1-203ENST00000564272 KCTD1Q719H9 257 aa23.6■■□□□ 1.37
SHCBP1-203ENST00000564272 STAG1Q8WVM7 1258 aa23.6■■□□□ 1.37
SHCBP1-203ENST00000564272 IL25Q9H293 177 aa23.6■■□□□ 1.37
SHCBP1-203ENST00000564272 C11orf49Q9H6J7 331 aa23.6■■□□□ 1.37
SHCBP1-203ENST00000564272 DDX20Q9UHI6 824 aaKnown RBP23.6■■□□□ 1.37
SHCBP1-203ENST00000564272 NEDD4P46934 1319 aa23.59■■□□□ 1.37
SHCBP1-203ENST00000564272 ATP2A1O14983 1001 aa23.59■■□□□ 1.37
SHCBP1-203ENST00000564272 IKQ13123 557 aaPredicted RBP23.59■■□□□ 1.37
SHCBP1-203ENST00000564272 MFSD6Q6ZSS7 791 aa23.59■■□□□ 1.37
SHCBP1-203ENST00000564272 ZNF792Q3KQV3 632 aa23.58■■□□□ 1.37
SHCBP1-203ENST00000564272 PRAMEF19Q5SWL8 479 aa23.58■■□□□ 1.37
SHCBP1-203ENST00000564272 FAM160B2Q86V87 743 aa23.58■■□□□ 1.37
SHCBP1-203ENST00000564272 PFASO15067 1338 aa23.58■■□□□ 1.36
SHCBP1-203ENST00000564272 EVI5O60447 810 aa23.57■■□□□ 1.36
SHCBP1-203ENST00000564272 CCDC96Q2M329 555 aa23.57■■□□□ 1.36
SHCBP1-203ENST00000564272 RCSD1Q6JBY9 416 aa23.57■■□□□ 1.36
SHCBP1-203ENST00000564272 CHURC1Q8WUH1 139 aa23.57■■□□□ 1.36
SHCBP1-203ENST00000564272 TMEM47Q9BQJ4 181 aa23.57■■□□□ 1.36
SHCBP1-203ENST00000564272 DSCC1Q9BVC3 393 aa23.57■■□□□ 1.36
SHCBP1-203ENST00000564272 TCP11L1Q9NUJ3 509 aa23.57■■□□□ 1.36
SHCBP1-203ENST00000564272 ZNF213O14771 459 aa23.56■■□□□ 1.36
SHCBP1-203ENST00000564272 MSCO60682 206 aa23.56■■□□□ 1.36
SHCBP1-203ENST00000564272 PCP11498 1178 aaKnown RBP23.56■■□□□ 1.36
SHCBP1-203ENST00000564272 OAZ1P54368 228 aa23.56■■□□□ 1.36
SHCBP1-203ENST00000564272 SNAP25P60880 206 aa23.56■■□□□ 1.36
SHCBP1-203ENST00000564272 DCAF4Q8WV16 495 aa23.56■■□□□ 1.36
SHCBP1-203ENST00000564272 RNF41Q9H4P4 317 aaPredicted RBP23.56■■□□□ 1.36
SHCBP1-203ENST00000564272 NR2E3Q9Y5X4 410 aa23.56■■□□□ 1.36
SHCBP1-203ENST00000564272 TOP1P11387 765 aaKnown RBP23.55■■□□□ 1.36
SHCBP1-203ENST00000564272 HABP4Q5JVS0 413 aaKnown RBP23.55■■□□□ 1.36
SHCBP1-203ENST00000564272 ANO1Q5XXA6 986 aa23.55■■□□□ 1.36
SHCBP1-203ENST00000564272 HOMER2Q9NSB8 354 aa23.55■■□□□ 1.36
SHCBP1-203ENST00000564272 COLQQ9Y215 455 aaPredicted RBP23.55■■□□□ 1.36
SHCBP1-203ENST00000564272 DIS3Q9Y2L1 958 aaKnown RBP23.55■■□□□ 1.36
SHCBP1-203ENST00000564272 ZNF536O15090 1300 aa23.55■■□□□ 1.36
SHCBP1-203ENST00000564272 PLA2G6O60733 806 aa23.54■■□□□ 1.36
SHCBP1-203ENST00000564272 COL6A1P12109 1028 aa23.54■■□□□ 1.36
SHCBP1-203ENST00000564272 C7orf61Q8IZ16 206 aa23.54■■□□□ 1.36
SHCBP1-203ENST00000564272 ESR2Q92731 530 aa23.54■■□□□ 1.36
SHCBP1-203ENST00000564272 DDX11Q96FC9 970 aa23.54■■□□□ 1.36
SHCBP1-203ENST00000564272 AGBL1Q96MI9 1066 aa23.54■■□□□ 1.36
SHCBP1-203ENST00000564272 TINF2Q9BSI4 451 aa23.54■■□□□ 1.36
SHCBP1-203ENST00000564272 PRR12Q9ULL5 1215 aa23.54■■□□□ 1.36
SHCBP1-203ENST00000564272 FRMPD2Q68DX3 1309 aaPredicted RBP23.54■■□□□ 1.36
SHCBP1-203ENST00000564272 SEPT4O43236 478 aa23.53■■□□□ 1.36
SHCBP1-203ENST00000564272 FDX1P10109 184 aa23.53■■□□□ 1.36
SHCBP1-203ENST00000564272 TTBK2Q6IQ55 1244 aa23.53■■□□□ 1.36
SHCBP1-203ENST00000564272 CCDC174Q6PII3 467 aa23.53■■□□□ 1.36
SHCBP1-203ENST00000564272 CHRDL2Q6WN34 429 aa23.53■■□□□ 1.36
SHCBP1-203ENST00000564272 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.53■■□□□ 1.36
SHCBP1-203ENST00000564272 CHST13Q8NET6 341 aa23.53■■□□□ 1.36
SHCBP1-203ENST00000564272 ZKSCAN3Q9BRR0 538 aa23.53■■□□□ 1.36
SHCBP1-203ENST00000564272 DNAJC25-GNG10A0A024R161 153 aa23.52■■□□□ 1.36
SHCBP1-203ENST00000564272 TAL1P17542 331 aaPredicted RBP23.52■■□□□ 1.36
SHCBP1-203ENST00000564272 SLC16A2P36021 539 aa23.52■■□□□ 1.36
SHCBP1-203ENST00000564272 ANKRD35Q8N283 1001 aa23.52■■□□□ 1.36
SHCBP1-203ENST00000564272 FBXO40Q9UH90 709 aa23.52■■□□□ 1.36
SHCBP1-203ENST00000564272 RAD50Q92878 1312 aa23.52■■□□□ 1.36
SHCBP1-203ENST00000564272 KDM4AO75164 1064 aa23.51■■□□□ 1.35
SHCBP1-203ENST00000564272 IMMTQ16891 758 aaKnown RBP23.51■■□□□ 1.35
SHCBP1-203ENST00000564272 ACAD9Q9H845 621 aa23.51■■□□□ 1.35
SHCBP1-203ENST00000564272 GPCPD1Q9NPB8 672 aa23.51■■□□□ 1.35
SHCBP1-203ENST00000564272 RNF146Q9NTX7 359 aa23.51■■□□□ 1.35
SHCBP1-203ENST00000564272 CTNNA3Q9UI47 895 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms