RNA–Protein interactions for RNA: ENST00000564111.5

SNX29-203, Transcript of sorting nexin 29, humanhuman

TSL 2

Gene SNX29, Length 2,248 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-203ENST00000564111 CTDSPL2Q05D32 466 aa17.51■□□□□ 0.39
SNX29-203ENST00000564111 CHST13Q8NET6 341 aa17.51■□□□□ 0.39
SNX29-203ENST00000564111 NBPF3Q9H094 633 aa17.51■□□□□ 0.39
SNX29-203ENST00000564111 ZNF214Q9UL59 606 aaPredicted RBP17.51■□□□□ 0.39
SNX29-203ENST00000564111 FAM47AQ5JRC9 791 aa17.5■□□□□ 0.39
SNX29-203ENST00000564111 AKNAD1Q5T1N1 836 aa17.5■□□□□ 0.39
SNX29-203ENST00000564111 TTC22Q5TAA0 569 aa17.5■□□□□ 0.39
SNX29-203ENST00000564111 VPS53Q5VIR6 699 aa17.5■□□□□ 0.39
SNX29-203ENST00000564111 MFSD6Q6ZSS7 791 aa17.5■□□□□ 0.39
SNX29-203ENST00000564111 LRRC47Q8N1G4 583 aaKnown RBP17.5■□□□□ 0.39
SNX29-203ENST00000564111 TTC14Q96N46 770 aa17.5■□□□□ 0.39
SNX29-203ENST00000564111 TOP1P11387 765 aaKnown RBP17.49■□□□□ 0.39
SNX29-203ENST00000564111 SLC1A4P43007 532 aa17.49■□□□□ 0.39
SNX29-203ENST00000564111 SAMD1Q6SPF0 538 aaPredicted RBP17.49■□□□□ 0.39
SNX29-203ENST00000564111 ESR2Q92731 530 aa17.49■□□□□ 0.39
SNX29-203ENST00000564111 DPF3Q92784 378 aa17.49■□□□□ 0.39
SNX29-203ENST00000564111 C11orf49Q9H6J7 331 aa17.49■□□□□ 0.39
SNX29-203ENST00000564111 SLC38A10Q9HBR0 1119 aa17.49■□□□□ 0.39
SNX29-203ENST00000564111 TOMM22Q9NS69 142 aa17.49■□□□□ 0.39
SNX29-203ENST00000564111 FBXO28Q9NVF7 368 aa17.49■□□□□ 0.39
SNX29-203ENST00000564111 STX8Q9UNK0 236 aa17.49■□□□□ 0.39
SNX29-203ENST00000564111 ZNF213O14771 459 aa17.49■□□□□ 0.39
SNX29-203ENST00000564111 IGHA2P01877 340 aa17.49■□□□□ 0.39
SNX29-203ENST00000564111 CCL14Q16627 93 aa17.49■□□□□ 0.39
SNX29-203ENST00000564111 DDX20Q9UHI6 824 aaKnown RBP17.49■□□□□ 0.39
SNX29-203ENST00000564111 TRIM32Q13049 653 aa17.48■□□□□ 0.39
SNX29-203ENST00000564111 SNRNP48Q6IEG0 339 aaKnown RBP17.48■□□□□ 0.39
SNX29-203ENST00000564111 ZNF467Q7Z7K2 595 aaPredicted RBP17.48■□□□□ 0.39
SNX29-203ENST00000564111 ZNF589Q86UQ0 364 aaPredicted RBP17.48■□□□□ 0.39
SNX29-203ENST00000564111 NPLOC4Q8TAT6 608 aa17.48■□□□□ 0.39
SNX29-203ENST00000564111 CNNM2Q9H8M5 875 aa17.48■□□□□ 0.39
SNX29-203ENST00000564111 CYBAP13498 195 aa17.48■□□□□ 0.39
SNX29-203ENST00000564111 IMMTQ16891 758 aaKnown RBP17.48■□□□□ 0.39
SNX29-203ENST00000564111 ISY1Q9ULR0 285 aaKnown RBP17.48■□□□□ 0.39
SNX29-203ENST00000564111 HTTP42858 3142 aa17.48■□□□□ 0.39
SNX29-203ENST00000564111 IKQ13123 557 aaPredicted RBP17.47■□□□□ 0.39
SNX29-203ENST00000564111 KIFC2Q96AC6 838 aa17.47■□□□□ 0.39
SNX29-203ENST00000564111 MAML3Q96JK9 1138 aa17.47■□□□□ 0.39
SNX29-203ENST00000564111 NUP88Q99567 741 aaPredicted RBP17.47■□□□□ 0.39
SNX29-203ENST00000564111 TNRC18O15417 2968 aaPredicted RBP17.47■□□□□ 0.39
SNX29-203ENST00000564111 CWC27Q6UX04 472 aaKnown RBP17.47■□□□□ 0.39
SNX29-203ENST00000564111 ARRDC4Q8NCT1 418 aa17.47■□□□□ 0.39
SNX29-203ENST00000564111 SYNGAP1Q96PV0 1343 aa17.46■□□□□ 0.39
SNX29-203ENST00000564111 CCND3P30281 292 aaPredicted RBP17.46■□□□□ 0.39
SNX29-203ENST00000564111 IQCA1Q86XH1 822 aa17.46■□□□□ 0.39
SNX29-203ENST00000564111 KRT23Q9C075 422 aa17.46■□□□□ 0.39
SNX29-203ENST00000564111 PFASO15067 1338 aa17.46■□□□□ 0.39
SNX29-203ENST00000564111 ALPK3Q96L96 1907 aa17.46■□□□□ 0.38
SNX29-203ENST00000564111 TMEM232C9JQI7 657 aa17.45■□□□□ 0.38
SNX29-203ENST00000564111 SEPT4O43236 478 aa17.45■□□□□ 0.38
SNX29-203ENST00000564111 EVI5O60447 810 aa17.45■□□□□ 0.38
SNX29-203ENST00000564111 COBLO75128 1261 aa17.45■□□□□ 0.38
SNX29-203ENST00000564111 ZNF792Q3KQV3 632 aa17.45■□□□□ 0.38
SNX29-203ENST00000564111 RRP12Q5JTH9 1297 aaKnown RBP17.45■□□□□ 0.38
SNX29-203ENST00000564111 DDX11Q96FC9 970 aa17.45■□□□□ 0.38
SNX29-203ENST00000564111 PAWRQ96IZ0 340 aaKnown RBP17.45■□□□□ 0.38
SNX29-203ENST00000564111 MAF1Q9H063 256 aa17.45■□□□□ 0.38
SNX29-203ENST00000564111 FLRT1Q9NZU1 646 aa17.45■□□□□ 0.38
SNX29-203ENST00000564111 CCDC96Q2M329 555 aa17.45■□□□□ 0.38
SNX29-203ENST00000564111 ACAD9Q9H845 621 aa17.45■□□□□ 0.38
SNX29-203ENST00000564111 IL17RBQ9NRM6 502 aa17.45■□□□□ 0.38
SNX29-203ENST00000564111 DNM1LO00429 736 aa17.44■□□□□ 0.38
SNX29-203ENST00000564111 CNGA1P29973 690 aa17.44■□□□□ 0.38
SNX29-203ENST00000564111 LHX8Q68G74 356 aa17.44■□□□□ 0.38
SNX29-203ENST00000564111 BTNL9Q6UXG8 535 aa17.44■□□□□ 0.38
SNX29-203ENST00000564111 DGKHQ86XP1 1220 aa17.44■□□□□ 0.38
SNX29-203ENST00000564111 PDE4AP27815 886 aa17.44■□□□□ 0.38
SNX29-203ENST00000564111 TINF2Q9BSI4 451 aa17.44■□□□□ 0.38
SNX29-203ENST00000564111 CNPY2Q9Y2B0 182 aa17.44■□□□□ 0.38
SNX29-203ENST00000564111 KBTBD13C9JR72 458 aa17.43■□□□□ 0.38
SNX29-203ENST00000564111 CYP2C19P33261 490 aa17.43■□□□□ 0.38
SNX29-203ENST00000564111 LOC102724159A0A0B4J2E5 919 aa17.43■□□□□ 0.38
SNX29-203ENST00000564111 MCCP23508 829 aa17.43■□□□□ 0.38
SNX29-203ENST00000564111 HAND2P61296 217 aa17.43■□□□□ 0.38
SNX29-203ENST00000564111 PWP2Q15269 919 aaKnown RBP17.43■□□□□ 0.38
SNX29-203ENST00000564111 HABP4Q5JVS0 413 aaKnown RBP17.43■□□□□ 0.38
SNX29-203ENST00000564111 GPATCH4Q5T3I0 446 aaKnown RBP17.43■□□□□ 0.38
SNX29-203ENST00000564111 TBC1D10CQ8IV04 446 aa17.43■□□□□ 0.38
SNX29-203ENST00000564111 TMEM47Q9BQJ4 181 aa17.43■□□□□ 0.38
SNX29-203ENST00000564111 DNAJC25-GNG10A0A024R161 153 aa17.42■□□□□ 0.38
SNX29-203ENST00000564111 A0A1W2PPC1 479 aa17.42■□□□□ 0.38
SNX29-203ENST00000564111 H0YGN5 161 aa17.42■□□□□ 0.38
SNX29-203ENST00000564111 COL6A1P12109 1028 aa17.42■□□□□ 0.38
SNX29-203ENST00000564111 MAMDC4Q6UXC1 1216 aa17.42■□□□□ 0.38
SNX29-203ENST00000564111 CPXCR1Q8N123 301 aa17.42■□□□□ 0.38
SNX29-203ENST00000564111 ANKRD35Q8N283 1001 aa17.42■□□□□ 0.38
SNX29-203ENST00000564111 RAVER2Q9HCJ3 691 aaKnown RBP17.42■□□□□ 0.38
SNX29-203ENST00000564111 U3KPZ7 1027 aaPredicted RBP17.42■□□□□ 0.38
SNX29-203ENST00000564111 SYDE2Q5VT97 1194 aa17.41■□□□□ 0.38
SNX29-203ENST00000564111 CENPQQ7L2Z9 268 aaPredicted RBP17.41■□□□□ 0.38
SNX29-203ENST00000564111 ANKS1AQ92625 1134 aa17.41■□□□□ 0.38
SNX29-203ENST00000564111 AKR1A1P14550 325 aa17.41■□□□□ 0.38
SNX29-203ENST00000564111 GSPT1P15170 499 aaKnown RBP17.41■□□□□ 0.38
SNX29-203ENST00000564111 RANBP17Q9H2T7 1088 aaKnown RBP17.41■□□□□ 0.38
SNX29-203ENST00000564111 PRR12Q9ULL5 1215 aa17.41■□□□□ 0.38
SNX29-203ENST00000564111 RARBP10826 455 aa17.4■□□□□ 0.38
SNX29-203ENST00000564111 MNX1P50219 401 aaPredicted RBP17.4■□□□□ 0.38
SNX29-203ENST00000564111 TRDNQ13061 729 aa17.4■□□□□ 0.38
SNX29-203ENST00000564111 DIS3LQ8TF46 1054 aaKnown RBP17.4■□□□□ 0.38
SNX29-203ENST00000564111 RNF146Q9NTX7 359 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms