RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 GMCL1Q96IK5 515 aa22.38■■□□□ 1.17
SPSB3-204ENST00000563741 C8orf76Q96K31 380 aa22.38■■□□□ 1.17
SPSB3-204ENST00000563741 SPZ1Q9BXG8 430 aa22.38■■□□□ 1.17
SPSB3-204ENST00000563741 CPVLQ9H3G5 476 aa22.38■■□□□ 1.17
SPSB3-204ENST00000563741 GJB4Q9NTQ9 266 aa22.38■■□□□ 1.17
SPSB3-204ENST00000563741 V9GY48 417 aaPredicted RBP22.38■■□□□ 1.17
SPSB3-204ENST00000563741 hCG_1642624A0A1W2PR95 340 aa22.37■■□□□ 1.17
SPSB3-204ENST00000563741 H3BQV1 296 aa22.37■■□□□ 1.17
SPSB3-204ENST00000563741 RAD21O60216 631 aa22.37■■□□□ 1.17
SPSB3-204ENST00000563741 CCDC96Q2M329 555 aa22.37■■□□□ 1.17
SPSB3-204ENST00000563741 GPATCH4Q5T3I0 446 aaKnown RBP22.37■■□□□ 1.17
SPSB3-204ENST00000563741 IFFO2Q5TF58 517 aa22.37■■□□□ 1.17
SPSB3-204ENST00000563741 CNKSR2Q8WXI2 1034 aa22.37■■□□□ 1.17
SPSB3-204ENST00000563741 OTUD5Q96G74 571 aa22.37■■□□□ 1.17
SPSB3-204ENST00000563741 F13A1P00488 732 aa22.37■■□□□ 1.17
SPSB3-204ENST00000563741 SLC1A4P43007 532 aa22.37■■□□□ 1.17
SPSB3-204ENST00000563741 AKAP17AQ02040 695 aaKnown RBP22.37■■□□□ 1.17
SPSB3-204ENST00000563741 NOL9Q5SY16 702 aaKnown RBP22.37■■□□□ 1.17
SPSB3-204ENST00000563741 FBXO18Q8NFZ0 1043 aa22.37■■□□□ 1.17
SPSB3-204ENST00000563741 SH2D4AQ9H788 454 aa22.37■■□□□ 1.17
SPSB3-204ENST00000563741 BAZ2BQ9UIF8 2168 aaKnown RBP22.36■■□□□ 1.17
SPSB3-204ENST00000563741 GUCY1B3Q02153 619 aa22.36■■□□□ 1.17
SPSB3-204ENST00000563741 KIAA1755Q5JYT7 1200 aa22.36■■□□□ 1.17
SPSB3-204ENST00000563741 OTUD7BQ6GQQ9 843 aa22.36■■□□□ 1.17
SPSB3-204ENST00000563741 KCTD1Q719H9 257 aa22.36■■□□□ 1.17
SPSB3-204ENST00000563741 GPCPD1Q9NPB8 672 aa22.36■■□□□ 1.17
SPSB3-204ENST00000563741 PTPRAP18433 802 aa22.35■■□□□ 1.17
SPSB3-204ENST00000563741 SMARCA1P28370 1054 aa22.35■■□□□ 1.17
SPSB3-204ENST00000563741 GTF2A2P52657 109 aa22.35■■□□□ 1.17
SPSB3-204ENST00000563741 IFNL1Q8IU54 200 aa22.35■■□□□ 1.17
SPSB3-204ENST00000563741 SPICE1Q8N0Z3 855 aa22.35■■□□□ 1.17
SPSB3-204ENST00000563741 UBA5Q9GZZ9 404 aa22.35■■□□□ 1.17
SPSB3-204ENST00000563741 VCPKMTQ9H867 229 aa22.35■■□□□ 1.17
SPSB3-204ENST00000563741 GOPCQ9HD26 462 aa22.35■■□□□ 1.17
SPSB3-204ENST00000563741 PICK1Q9NRD5 415 aa22.35■■□□□ 1.17
SPSB3-204ENST00000563741 RBM27Q9P2N5 1060 aaKnown RBP22.35■■□□□ 1.17
SPSB3-204ENST00000563741 TESPA1A2RU30 521 aaPredicted RBP22.34■■□□□ 1.17
SPSB3-204ENST00000563741 ALDH1A1P00352 501 aa22.34■■□□□ 1.17
SPSB3-204ENST00000563741 PPATQ06203 517 aa22.34■■□□□ 1.17
SPSB3-204ENST00000563741 PPIL2Q13356 520 aa22.34■■□□□ 1.17
SPSB3-204ENST00000563741 TTBK2Q6IQ55 1244 aa22.34■■□□□ 1.17
SPSB3-204ENST00000563741 FERMT3Q86UX7 667 aa22.34■■□□□ 1.17
SPSB3-204ENST00000563741 RGS22Q8NE09 1264 aa22.34■■□□□ 1.17
SPSB3-204ENST00000563741 PIBF1Q8WXW3 757 aa22.34■■□□□ 1.17
SPSB3-204ENST00000563741 MS4A4AQ96JQ5 239 aa22.34■■□□□ 1.17
SPSB3-204ENST00000563741 NUP88Q99567 741 aaPredicted RBP22.34■■□□□ 1.17
SPSB3-204ENST00000563741 FEZ1Q99689 392 aa22.34■■□□□ 1.17
SPSB3-204ENST00000563741 ZYXQ15942 572 aaKnown RBP22.34■■□□□ 1.17
SPSB3-204ENST00000563741 PFKFB3Q16875 520 aaPredicted RBP22.34■■□□□ 1.17
SPSB3-204ENST00000563741 SHISA4Q96DD7 197 aa22.34■■□□□ 1.17
SPSB3-204ENST00000563741 RIOX1Q9H6W3 641 aa22.34■■□□□ 1.17
SPSB3-204ENST00000563741 CASP8AP2Q9UKL3 1982 aa22.33■■□□□ 1.17
SPSB3-204ENST00000563741 SCG2P13521 617 aa22.33■■□□□ 1.17
SPSB3-204ENST00000563741 KRT40Q6A162 431 aa22.33■■□□□ 1.17
SPSB3-204ENST00000563741 CLEC17AQ6ZS10 378 aa22.33■■□□□ 1.17
SPSB3-204ENST00000563741 KIAA1683Q9H0B3 1180 aa22.33■■□□□ 1.17
SPSB3-204ENST00000563741 ISY1Q9ULR0 285 aaKnown RBP22.33■■□□□ 1.17
SPSB3-204ENST00000563741 WDR18Q9BV38 432 aa22.32■■□□□ 1.16
SPSB3-204ENST00000563741 IRF6O14896 467 aa22.31■■□□□ 1.16
SPSB3-204ENST00000563741 BMP3P12645 472 aa22.31■■□□□ 1.16
SPSB3-204ENST00000563741 SLC16A2P36021 539 aa22.31■■□□□ 1.16
SPSB3-204ENST00000563741 RESTQ13127 1097 aa22.31■■□□□ 1.16
SPSB3-204ENST00000563741 TRIM29Q14134 588 aa22.31■■□□□ 1.16
SPSB3-204ENST00000563741 CHAMP1Q96JM3 812 aa22.31■■□□□ 1.16
SPSB3-204ENST00000563741 VPS54Q9P1Q0 977 aa22.31■■□□□ 1.16
SPSB3-204ENST00000563741 MYH6P13533 1939 aa22.31■■□□□ 1.16
SPSB3-204ENST00000563741 IGF2BP3O00425 579 aaKnown RBP eCLIP22.31■■□□□ 1.16
SPSB3-204ENST00000563741 CETPP11597 493 aa22.31■■□□□ 1.16
SPSB3-204ENST00000563741 SNAPC2Q13487 334 aa22.31■■□□□ 1.16
SPSB3-204ENST00000563741 MTMR2Q13614 643 aa22.31■■□□□ 1.16
SPSB3-204ENST00000563741 ADGRF4Q8IZF3 695 aa22.31■■□□□ 1.16
SPSB3-204ENST00000563741 RRP36Q96EU6 259 aaKnown RBP22.31■■□□□ 1.16
SPSB3-204ENST00000563741 CFHR5Q9BXR6 569 aa22.31■■□□□ 1.16
SPSB3-204ENST00000563741 CCL15-CCL14A0A0B4J2E2 113 aa22.3■■□□□ 1.16
SPSB3-204ENST00000563741 USP17L10C9JJH3 530 aa22.3■■□□□ 1.16
SPSB3-204ENST00000563741 TBC1D8O95759 1140 aa22.3■■□□□ 1.16
SPSB3-204ENST00000563741 SPP2Q13103 211 aa22.3■■□□□ 1.16
SPSB3-204ENST00000563741 CCL15Q16663 113 aa22.3■■□□□ 1.16
SPSB3-204ENST00000563741 FAM83BQ5T0W9 1011 aa22.3■■□□□ 1.16
SPSB3-204ENST00000563741 HOMER1Q86YM7 354 aa22.3■■□□□ 1.16
SPSB3-204ENST00000563741 ZNF280CQ8ND82 737 aa22.3■■□□□ 1.16
SPSB3-204ENST00000563741 BRI3BPQ8WY22 251 aa22.3■■□□□ 1.16
SPSB3-204ENST00000563741 PIGSQ96S52 555 aa22.3■■□□□ 1.16
SPSB3-204ENST00000563741 PTPN18Q99952 460 aa22.3■■□□□ 1.16
SPSB3-204ENST00000563741 JMJD4Q9H9V9 463 aa22.3■■□□□ 1.16
SPSB3-204ENST00000563741 AS3MTQ9HBK9 375 aa22.3■■□□□ 1.16
SPSB3-204ENST00000563741 VAT1LQ9HCJ6 419 aa22.3■■□□□ 1.16
SPSB3-204ENST00000563741 ZHX2Q9Y6X8 837 aa22.3■■□□□ 1.16
SPSB3-204ENST00000563741 BAG4O95429 457 aaKnown RBP22.29■■□□□ 1.16
SPSB3-204ENST00000563741 MCTP1Q6DN14 999 aa22.29■■□□□ 1.16
SPSB3-204ENST00000563741 GPKOWQ92917 476 aaPredicted RBP eCLIP22.29■■□□□ 1.16
SPSB3-204ENST00000563741 KCNJ14Q9UNX9 436 aa22.29■■□□□ 1.16
SPSB3-204ENST00000563741 TMEM232C9JQI7 657 aa22.28■■□□□ 1.16
SPSB3-204ENST00000563741 MMP1P03956 469 aa22.28■■□□□ 1.16
SPSB3-204ENST00000563741 XBP1P17861 261 aa22.28■■□□□ 1.16
SPSB3-204ENST00000563741 FOXD4L6Q3SYB3 417 aaPredicted RBP22.28■■□□□ 1.16
SPSB3-204ENST00000563741 WWC2Q6AWC2 1192 aa22.28■■□□□ 1.16
SPSB3-204ENST00000563741 BTNL9Q6UXG8 535 aa22.28■■□□□ 1.16
SPSB3-204ENST00000563741 FOXD4L3Q6VB84 417 aaPredicted RBP22.28■■□□□ 1.16
SPSB3-204ENST00000563741 LPAR1Q92633 364 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms