RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 TBX2Q13207 712 aaPredicted RBP11.69□□□□□ -0.54
RNF40-204ENST00000563683 MSANTD4Q8NCY6 345 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 IGDCC4Q8TDY8 1250 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 TAF4BQ92750 862 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 MYCBPQ99417 103 aaPredicted RBP11.69□□□□□ -0.54
RNF40-204ENST00000563683 NAA15Q9BXJ9 866 aaKnown RBP11.69□□□□□ -0.54
RNF40-204ENST00000563683 COL15A1P39059 1388 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 ARHGAP23Q9P227 1491 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 KRT86O43790 486 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 NONOQ15233 471 aaKnown RBP eCLIP11.69□□□□□ -0.54
RNF40-204ENST00000563683 ZFYVE27Q5T4F4 411 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 SPATA1Q5VX52 437 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 RESP18Q5W5W9 173 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 TOGARAM2Q6ZUX3 1019 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 STAG1Q8WVM7 1258 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 ATP8A2Q9NTI2 1148 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 MINPP1Q9UNW1 487 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 FAN1Q9Y2M0 1017 aa11.69□□□□□ -0.54
RNF40-204ENST00000563683 SRPRBQ9Y5M8 271 aaKnown RBP11.69□□□□□ -0.54
RNF40-204ENST00000563683 PTPREP23469 700 aa11.68□□□□□ -0.54
RNF40-204ENST00000563683 GTF2IP78347 998 aa11.68□□□□□ -0.54
RNF40-204ENST00000563683 EFCAB13Q8IY85 973 aa11.68□□□□□ -0.54
RNF40-204ENST00000563683 ENAHQ8N8S7 591 aaPredicted RBP11.68□□□□□ -0.54
RNF40-204ENST00000563683 PLA2G12BQ9BX93 195 aa11.68□□□□□ -0.54
RNF40-204ENST00000563683 SLIT1O75093 1534 aa11.68□□□□□ -0.54
RNF40-204ENST00000563683 TECP42680 631 aa11.68□□□□□ -0.54
RNF40-204ENST00000563683 CORO7P57737 925 aa11.68□□□□□ -0.54
RNF40-204ENST00000563683 SV2BQ7L1I2 683 aa11.68□□□□□ -0.54
RNF40-204ENST00000563683 TRIML1Q8N9V2 468 aa11.68□□□□□ -0.54
RNF40-204ENST00000563683 L1RE1Q9UN81 338 aa11.68□□□□□ -0.54
RNF40-204ENST00000563683 BICDL2A1A5D9 508 aa11.68□□□□□ -0.54
RNF40-204ENST00000563683 CASP14P31944 242 aa11.68□□□□□ -0.54
RNF40-204ENST00000563683 MAP9Q49MG5 647 aa11.68□□□□□ -0.54
RNF40-204ENST00000563683 CABP7Q86V35 215 aa11.68□□□□□ -0.54
RNF40-204ENST00000563683 FBXL16Q8N461 479 aa11.68□□□□□ -0.54
RNF40-204ENST00000563683 LRWD1Q9UFC0 647 aa11.68□□□□□ -0.54
RNF40-204ENST00000563683 CPDO75976 1380 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 USP17L3A6NCW0 530 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 USP17L4A6NCW7 530 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 MCM3P25205 808 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 KRT83P78385 493 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 USP17L1Q7RTZ2 530 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 SGMS1Q86VZ5 419 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 TC2NQ8N9U0 490 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 EPB41L4AQ9HCS5 686 aaPredicted RBP11.67□□□□□ -0.54
RNF40-204ENST00000563683 TOPAZ1Q8N9V7 1692 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 TCP10Q12799 353 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 MORC3Q14149 939 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 DNAJC21Q5F1R6 531 aaKnown RBP11.67□□□□□ -0.54
RNF40-204ENST00000563683 CUL5Q93034 780 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 SPAG5Q96R06 1193 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 NCAPGQ9BPX3 1015 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 CPVLQ9H3G5 476 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 ABCB6Q9NP58 842 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 FRMPD2Q68DX3 1309 aaPredicted RBP11.67□□□□□ -0.54
RNF40-204ENST00000563683 FAM205CA6NFA0 338 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 KCNJ18B7U540 433 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 TRAF5O00463 557 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 PRR29P0C7W0 189 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 KCNJ12Q14500 433 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 CYP26C1Q6V0L0 522 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 USP49Q70CQ1 688 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 ALS2CR12Q96Q35 445 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 PANX2Q96RD6 677 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 ANKZF1Q9H8Y5 726 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 BSDC1Q9NW68 430 aaPredicted RBP11.67□□□□□ -0.54
RNF40-204ENST00000563683 TBC1D7Q9P0N9 293 aa11.67□□□□□ -0.54
RNF40-204ENST00000563683 UBR1Q8IWV7 1749 aa11.66□□□□□ -0.54
RNF40-204ENST00000563683 PPFIA4O75335 1185 aa11.66□□□□□ -0.54
RNF40-204ENST00000563683 DDAH1O94760 285 aa11.66□□□□□ -0.54
RNF40-204ENST00000563683 CASP8Q14790 479 aa11.66□□□□□ -0.54
RNF40-204ENST00000563683 ALX1Q15699 326 aa11.66□□□□□ -0.54
RNF40-204ENST00000563683 TMTC1Q8IUR5 882 aa11.66□□□□□ -0.54
RNF40-204ENST00000563683 REXO1Q8N1G1 1221 aaKnown RBP11.66□□□□□ -0.54
RNF40-204ENST00000563683 PSMB7Q99436 277 aa11.66□□□□□ -0.54
RNF40-204ENST00000563683 TMCO5BA8MYB1 307 aa11.66□□□□□ -0.54
RNF40-204ENST00000563683 NKX1-1Q15270 411 aaPredicted RBP11.66□□□□□ -0.54
RNF40-204ENST00000563683 WHAMMP3Q1A5X7 153 aa11.66□□□□□ -0.54
RNF40-204ENST00000563683 LRRC47Q8N1G4 583 aaKnown RBP11.66□□□□□ -0.54
RNF40-204ENST00000563683 GSDMAQ96QA5 445 aa11.66□□□□□ -0.54
RNF40-204ENST00000563683 USP21Q9UK80 565 aa11.66□□□□□ -0.54
RNF40-204ENST00000563683 HPSEQ9Y251 543 aa11.66□□□□□ -0.54
RNF40-204ENST00000563683 PRPF3O43395 683 aaKnown RBP11.66□□□□□ -0.54
RNF40-204ENST00000563683 BTDP43251 543 aa11.66□□□□□ -0.54
RNF40-204ENST00000563683 PACS2Q86VP3 889 aa11.66□□□□□ -0.54
RNF40-204ENST00000563683 EHBP1Q8NDI1 1231 aa11.66□□□□□ -0.54
RNF40-204ENST00000563683 ENOX1Q8TC92 643 aaKnown RBP11.66□□□□□ -0.54
RNF40-204ENST00000563683 SNX29Q8TEQ0 813 aa11.66□□□□□ -0.54
RNF40-204ENST00000563683 RBM17Q96I25 401 aaKnown RBP11.66□□□□□ -0.54
RNF40-204ENST00000563683 NAPGQ99747 312 aaPredicted RBP11.66□□□□□ -0.54
RNF40-204ENST00000563683 PPP1R12BO60237 982 aaPredicted RBP11.65□□□□□ -0.54
RNF40-204ENST00000563683 RPN1P04843 607 aaKnown RBP11.65□□□□□ -0.54
RNF40-204ENST00000563683 RBL2Q08999 1139 aa11.65□□□□□ -0.54
RNF40-204ENST00000563683 CCDC91Q7Z6B0 441 aa11.65□□□□□ -0.54
RNF40-204ENST00000563683 METTL16Q86W50 562 aaKnown RBP11.65□□□□□ -0.54
RNF40-204ENST00000563683 TEX2Q8IWB9 1127 aa11.65□□□□□ -0.54
RNF40-204ENST00000563683 ELOA2Q8IYF1 753 aaPredicted RBP11.65□□□□□ -0.54
RNF40-204ENST00000563683 ZNF34Q8IZ26 560 aa11.65□□□□□ -0.54
RNF40-204ENST00000563683 TTF2Q9UNY4 1162 aaKnown RBP11.65□□□□□ -0.54
RNF40-204ENST00000563683 MRC1P22897 1456 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms