RNA–Protein interactions for RNA: ENST00000563667.5

PDXDC1-209, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-209ENST00000563667 UBA5Q9GZZ9 404 aa17.91■□□□□ 0.46
PDXDC1-209ENST00000563667 CPVLQ9H3G5 476 aa17.91■□□□□ 0.46
PDXDC1-209ENST00000563667 VAT1LQ9HCJ6 419 aa17.91■□□□□ 0.46
PDXDC1-209ENST00000563667 CNTNAP5Q8WYK1 1306 aa17.91■□□□□ 0.46
PDXDC1-209ENST00000563667 MANSC4A6NHS7 340 aaPredicted RBP17.9■□□□□ 0.46
PDXDC1-209ENST00000563667 BRD1O95696 1058 aa17.9■□□□□ 0.46
PDXDC1-209ENST00000563667 PDIA4P13667 645 aaKnown RBP17.9■□□□□ 0.46
PDXDC1-209ENST00000563667 PTPRAP18433 802 aa17.9■□□□□ 0.46
PDXDC1-209ENST00000563667 GUCY1B3Q02153 619 aa17.9■□□□□ 0.46
PDXDC1-209ENST00000563667 TRIM29Q14134 588 aa17.9■□□□□ 0.46
PDXDC1-209ENST00000563667 OPTNQ96CV9 577 aa17.9■□□□□ 0.46
PDXDC1-209ENST00000563667 GMCL1Q96IK5 515 aa17.9■□□□□ 0.46
PDXDC1-209ENST00000563667 AIFM3Q96NN9 605 aa17.9■□□□□ 0.46
PDXDC1-209ENST00000563667 NUP88Q99567 741 aaPredicted RBP17.9■□□□□ 0.46
PDXDC1-209ENST00000563667 VCPKMTQ9H867 229 aa17.9■□□□□ 0.46
PDXDC1-209ENST00000563667 ZHX2Q9Y6X8 837 aa17.9■□□□□ 0.46
PDXDC1-209ENST00000563667 ATAD5Q96QE3 1844 aa17.9■□□□□ 0.46
PDXDC1-209ENST00000563667 ZSCAN22P10073 491 aaPredicted RBP17.89■□□□□ 0.45
PDXDC1-209ENST00000563667 BMP3P12645 472 aa17.89■□□□□ 0.45
PDXDC1-209ENST00000563667 TM4SF4P48230 202 aa17.89■□□□□ 0.45
PDXDC1-209ENST00000563667 SPP2Q13103 211 aa17.89■□□□□ 0.45
PDXDC1-209ENST00000563667 IKQ13123 557 aaPredicted RBP17.89■□□□□ 0.45
PDXDC1-209ENST00000563667 VGLL4Q14135 290 aa17.89■□□□□ 0.45
PDXDC1-209ENST00000563667 TTBK2Q6IQ55 1244 aa17.89■□□□□ 0.45
PDXDC1-209ENST00000563667 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.89■□□□□ 0.45
PDXDC1-209ENST00000563667 SPZ1Q9BXG8 430 aa17.89■□□□□ 0.45
PDXDC1-209ENST00000563667 RBM27Q9P2N5 1060 aaKnown RBP17.89■□□□□ 0.45
PDXDC1-209ENST00000563667 MTMR6Q9Y217 621 aa17.89■□□□□ 0.45
PDXDC1-209ENST00000563667 ZDHHC9Q9Y397 364 aa17.89■□□□□ 0.45
PDXDC1-209ENST00000563667 DOCK1Q14185 1865 aa17.88■□□□□ 0.45
PDXDC1-209ENST00000563667 TBC1D8O95759 1140 aa17.88■□□□□ 0.45
PDXDC1-209ENST00000563667 SMARCA1P28370 1054 aa17.88■□□□□ 0.45
PDXDC1-209ENST00000563667 SLC16A2P36021 539 aa17.88■□□□□ 0.45
PDXDC1-209ENST00000563667 OTUD7BQ6GQQ9 843 aa17.88■□□□□ 0.45
PDXDC1-209ENST00000563667 ZNF280CQ8ND82 737 aa17.88■□□□□ 0.45
PDXDC1-209ENST00000563667 RRP36Q96EU6 259 aaKnown RBP17.88■□□□□ 0.45
PDXDC1-209ENST00000563667 WDR18Q9BV38 432 aa17.88■□□□□ 0.45
PDXDC1-209ENST00000563667 KIAA1683Q9H0B3 1180 aa17.88■□□□□ 0.45
PDXDC1-209ENST00000563667 SNCAIPQ9Y6H5 919 aa17.88■□□□□ 0.45
PDXDC1-209ENST00000563667 TRIM75PA6NK02 468 aa17.87■□□□□ 0.45
PDXDC1-209ENST00000563667 USP17L10C9JJH3 530 aa17.87■□□□□ 0.45
PDXDC1-209ENST00000563667 TMEM232C9JQI7 657 aa17.87■□□□□ 0.45
PDXDC1-209ENST00000563667 CYTH3O43739 400 aa17.87■□□□□ 0.45
PDXDC1-209ENST00000563667 USP14P54578 494 aa17.87■□□□□ 0.45
PDXDC1-209ENST00000563667 INHBEP58166 350 aa17.87■□□□□ 0.45
PDXDC1-209ENST00000563667 MTMR2Q13614 643 aa17.87■□□□□ 0.45
PDXDC1-209ENST00000563667 PKN1Q16512 942 aa17.87■□□□□ 0.45
PDXDC1-209ENST00000563667 SLC35G1Q2M3R5 365 aa17.87■□□□□ 0.45
PDXDC1-209ENST00000563667 KIAA1755Q5JYT7 1200 aa17.87■□□□□ 0.45
PDXDC1-209ENST00000563667 FAM83BQ5T0W9 1011 aa17.87■□□□□ 0.45
PDXDC1-209ENST00000563667 MCTP1Q6DN14 999 aa17.87■□□□□ 0.45
PDXDC1-209ENST00000563667 HOMER1Q86YM7 354 aa17.87■□□□□ 0.45
PDXDC1-209ENST00000563667 TNPO1Q92973 898 aaKnown RBP17.87■□□□□ 0.45
PDXDC1-209ENST00000563667 OTUD5Q96G74 571 aa17.87■□□□□ 0.45
PDXDC1-209ENST00000563667 GJB4Q9NTQ9 266 aa17.87■□□□□ 0.45
PDXDC1-209ENST00000563667 SEC63Q9UGP8 760 aaKnown RBP17.87■□□□□ 0.45
PDXDC1-209ENST00000563667 SLC34A2O95436 690 aa17.86■□□□□ 0.45
PDXDC1-209ENST00000563667 SCG2P13521 617 aa17.86■□□□□ 0.45
PDXDC1-209ENST00000563667 XBP1P17861 261 aa17.86■□□□□ 0.45
PDXDC1-209ENST00000563667 GJA5P36382 358 aa17.86■□□□□ 0.45
PDXDC1-209ENST00000563667 KRT40Q6A162 431 aa17.86■□□□□ 0.45
PDXDC1-209ENST00000563667 ADGRF4Q8IZF3 695 aa17.86■□□□□ 0.45
PDXDC1-209ENST00000563667 FBXO18Q8NFZ0 1043 aa17.86■□□□□ 0.45
PDXDC1-209ENST00000563667 PIGSQ96S52 555 aa17.86■□□□□ 0.45
PDXDC1-209ENST00000563667 RIOX1Q9H6W3 641 aa17.86■□□□□ 0.45
PDXDC1-209ENST00000563667 ALDH1A1P00352 501 aa17.85■□□□□ 0.45
PDXDC1-209ENST00000563667 F13A1P00488 732 aa17.85■□□□□ 0.45
PDXDC1-209ENST00000563667 BACE1P56817 501 aa17.85■□□□□ 0.45
PDXDC1-209ENST00000563667 PFKFB3Q16875 520 aaPredicted RBP17.85■□□□□ 0.45
PDXDC1-209ENST00000563667 SYDE2Q5VT97 1194 aa17.85■□□□□ 0.45
PDXDC1-209ENST00000563667 SAMD1Q6SPF0 538 aaPredicted RBP17.85■□□□□ 0.45
PDXDC1-209ENST00000563667 FERMT3Q86UX7 667 aa17.85■□□□□ 0.45
PDXDC1-209ENST00000563667 IFNL1Q8IU54 200 aa17.85■□□□□ 0.45
PDXDC1-209ENST00000563667 CNKSR2Q8WXI2 1034 aa17.85■□□□□ 0.45
PDXDC1-209ENST00000563667 JMJD4Q9H9V9 463 aa17.85■□□□□ 0.45
PDXDC1-209ENST00000563667 C19orf81C9J6K1 198 aa17.84■□□□□ 0.45
PDXDC1-209ENST00000563667 WDR46O15213 610 aaKnown RBP17.84■□□□□ 0.45
PDXDC1-209ENST00000563667 DGKZQ13574 1117 aa17.84■□□□□ 0.45
PDXDC1-209ENST00000563667 FOXD4L6Q3SYB3 417 aaPredicted RBP17.84■□□□□ 0.45
PDXDC1-209ENST00000563667 FOXD4L3Q6VB84 417 aaPredicted RBP17.84■□□□□ 0.45
PDXDC1-209ENST00000563667 HEATR3Q7Z4Q2 680 aa17.84■□□□□ 0.45
PDXDC1-209ENST00000563667 CHURC1Q8WUH1 139 aa17.84■□□□□ 0.45
PDXDC1-209ENST00000563667 LPAR1Q92633 364 aa17.84■□□□□ 0.45
PDXDC1-209ENST00000563667 GPKOWQ92917 476 aaPredicted RBP eCLIP17.84■□□□□ 0.45
PDXDC1-209ENST00000563667 TMOD4Q9NZQ9 345 aa17.84■□□□□ 0.45
PDXDC1-209ENST00000563667 VPS54Q9P1Q0 977 aa17.84■□□□□ 0.45
PDXDC1-209ENST00000563667 KCNJ14Q9UNX9 436 aa17.84■□□□□ 0.45
PDXDC1-209ENST00000563667 STAT2P52630 851 aa17.83■□□□□ 0.44
PDXDC1-209ENST00000563667 GTF2A2P52657 109 aa17.83■□□□□ 0.44
PDXDC1-209ENST00000563667 HMGCS2P54868 508 aa17.83■□□□□ 0.44
PDXDC1-209ENST00000563667 GNL2Q13823 731 aaKnown RBP17.83■□□□□ 0.44
PDXDC1-209ENST00000563667 SAFBQ15424 915 aaKnown RBP eCLIP17.83■□□□□ 0.44
PDXDC1-209ENST00000563667 ERO1BQ86YB8 467 aa17.83■□□□□ 0.44
PDXDC1-209ENST00000563667 EMILIN3Q9NT22 766 aa17.83■□□□□ 0.44
PDXDC1-209ENST00000563667 AFG3L2Q9Y4W6 797 aa17.83■□□□□ 0.44
PDXDC1-209ENST00000563667 CCL15-CCL14A0A0B4J2E2 113 aa17.82■□□□□ 0.44
PDXDC1-209ENST00000563667 SPDYE5A6NIY4 337 aa17.82■□□□□ 0.44
PDXDC1-209ENST00000563667 IGF2BP3O00425 579 aaKnown RBP eCLIP17.82■□□□□ 0.44
PDXDC1-209ENST00000563667 NLRP5P59047 1200 aa17.82■□□□□ 0.44
PDXDC1-209ENST00000563667 PPATQ06203 517 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms