RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 AKNAD1Q5T1N1 836 aa14.45□□□□□ -0.1
NSMCE1-204ENST00000563273 TTC22Q5TAA0 569 aa14.45□□□□□ -0.1
NSMCE1-204ENST00000563273 LHX8Q68G74 356 aa14.45□□□□□ -0.1
NSMCE1-204ENST00000563273 CHURC1Q8WUH1 139 aa14.45□□□□□ -0.1
NSMCE1-204ENST00000563273 MMP19Q99542 508 aa14.45□□□□□ -0.1
NSMCE1-204ENST00000563273 STX8Q9UNK0 236 aa14.45□□□□□ -0.1
NSMCE1-204ENST00000563273 RAD50Q92878 1312 aa14.44□□□□□ -0.1
NSMCE1-204ENST00000563273 CCND3P30281 292 aaPredicted RBP14.44□□□□□ -0.1
NSMCE1-204ENST00000563273 SLC1A4P43007 532 aa14.44□□□□□ -0.1
NSMCE1-204ENST00000563273 STAT2P52630 851 aa14.44□□□□□ -0.1
NSMCE1-204ENST00000563273 KCTD2Q14681 263 aa14.44□□□□□ -0.1
NSMCE1-204ENST00000563273 RCSD1Q6JBY9 416 aa14.44□□□□□ -0.1
NSMCE1-204ENST00000563273 SAMD1Q6SPF0 538 aaPredicted RBP14.44□□□□□ -0.1
NSMCE1-204ENST00000563273 CWC27Q6UX04 472 aaKnown RBP14.44□□□□□ -0.1
NSMCE1-204ENST00000563273 MFSD6Q6ZSS7 791 aa14.44□□□□□ -0.1
NSMCE1-204ENST00000563273 MSL3Q8N5Y2 521 aaKnown RBP14.44□□□□□ -0.1
NSMCE1-204ENST00000563273 MAML3Q96JK9 1138 aa14.44□□□□□ -0.1
NSMCE1-204ENST00000563273 TTC14Q96N46 770 aa14.44□□□□□ -0.1
NSMCE1-204ENST00000563273 NBPF3Q9H094 633 aa14.44□□□□□ -0.1
NSMCE1-204ENST00000563273 INCENPQ9NQS7 918 aa14.44□□□□□ -0.1
NSMCE1-204ENST00000563273 ZNF213O14771 459 aa14.43□□□□□ -0.1
NSMCE1-204ENST00000563273 GSPT1P15170 499 aaKnown RBP14.43□□□□□ -0.1
NSMCE1-204ENST00000563273 CYP2C19P33261 490 aa14.43□□□□□ -0.1
NSMCE1-204ENST00000563273 ZNF792Q3KQV3 632 aa14.43□□□□□ -0.1
NSMCE1-204ENST00000563273 SNRNP48Q6IEG0 339 aaKnown RBP14.43□□□□□ -0.1
NSMCE1-204ENST00000563273 CHST13Q8NET6 341 aa14.43□□□□□ -0.1
NSMCE1-204ENST00000563273 DCAF4Q8WV16 495 aa14.43□□□□□ -0.1
NSMCE1-204ENST00000563273 KIFC2Q96AC6 838 aa14.43□□□□□ -0.1
NSMCE1-204ENST00000563273 PAWRQ96IZ0 340 aaKnown RBP14.43□□□□□ -0.1
NSMCE1-204ENST00000563273 FBXO40Q9UH90 709 aa14.43□□□□□ -0.1
NSMCE1-204ENST00000563273 DDX20Q9UHI6 824 aaKnown RBP14.43□□□□□ -0.1
NSMCE1-204ENST00000563273 CTNNA3Q9UI47 895 aa14.43□□□□□ -0.1
NSMCE1-204ENST00000563273 CTDP1Q9Y5B0 961 aaPredicted RBP14.43□□□□□ -0.1
NSMCE1-204ENST00000563273 NR2E3Q9Y5X4 410 aa14.43□□□□□ -0.1
NSMCE1-204ENST00000563273 DNAJC25-GNG10A0A024R161 153 aa14.42□□□□□ -0.1
NSMCE1-204ENST00000563273 TMEM232C9JQI7 657 aa14.42□□□□□ -0.1
NSMCE1-204ENST00000563273 NMT2O60551 498 aa14.42□□□□□ -0.1
NSMCE1-204ENST00000563273 TOP1P11387 765 aaKnown RBP14.42□□□□□ -0.1
NSMCE1-204ENST00000563273 COL6A1P12109 1028 aa14.42□□□□□ -0.1
NSMCE1-204ENST00000563273 MCCP23508 829 aa14.42□□□□□ -0.1
NSMCE1-204ENST00000563273 IRX6P78412 446 aaPredicted RBP14.42□□□□□ -0.1
NSMCE1-204ENST00000563273 TKFCQ3LXA3 575 aa14.42□□□□□ -0.1
NSMCE1-204ENST00000563273 CCDC178Q5BJE1 867 aa14.42□□□□□ -0.1
NSMCE1-204ENST00000563273 BTNL9Q6UXG8 535 aa14.42□□□□□ -0.1
NSMCE1-204ENST00000563273 TBC1D10CQ8IV04 446 aa14.42□□□□□ -0.1
NSMCE1-204ENST00000563273 ESR2Q92731 530 aa14.42□□□□□ -0.1
NSMCE1-204ENST00000563273 DPF3Q92784 378 aa14.42□□□□□ -0.1
NSMCE1-204ENST00000563273 TOMM22Q9NS69 142 aa14.42□□□□□ -0.1
NSMCE1-204ENST00000563273 PARP14Q460N5 1801 aa14.42□□□□□ -0.1
NSMCE1-204ENST00000563273 H0YGN5 161 aa14.41□□□□□ -0.1
NSMCE1-204ENST00000563273 SEPT4O43236 478 aa14.41□□□□□ -0.1
NSMCE1-204ENST00000563273 HAND2P61296 217 aa14.41□□□□□ -0.1
NSMCE1-204ENST00000563273 RRP12Q5JTH9 1297 aaKnown RBP14.41□□□□□ -0.1
NSMCE1-204ENST00000563273 ZNF467Q7Z7K2 595 aaPredicted RBP14.41□□□□□ -0.1
NSMCE1-204ENST00000563273 TRPV1Q8NER1 839 aa14.41□□□□□ -0.1
NSMCE1-204ENST00000563273 DIS3LQ8TF46 1054 aaKnown RBP14.41□□□□□ -0.1
NSMCE1-204ENST00000563273 RUFY2Q8WXA3 655 aa14.41□□□□□ -0.1
NSMCE1-204ENST00000563273 C11orf49Q9H6J7 331 aa14.41□□□□□ -0.1
NSMCE1-204ENST00000563273 RIPK3Q9Y572 518 aa14.41□□□□□ -0.1
NSMCE1-204ENST00000563273 SNHG28P0DPA3 235 aa14.4□□□□□ -0.1
NSMCE1-204ENST00000563273 IMMTQ16891 758 aaKnown RBP14.4□□□□□ -0.1
NSMCE1-204ENST00000563273 MAMDC4Q6UXC1 1216 aa14.4□□□□□ -0.1
NSMCE1-204ENST00000563273 DGKHQ86XP1 1220 aa14.4□□□□□ -0.1
NSMCE1-204ENST00000563273 TMEM47Q9BQJ4 181 aa14.4□□□□□ -0.1
NSMCE1-204ENST00000563273 TINF2Q9BSI4 451 aa14.4□□□□□ -0.1
NSMCE1-204ENST00000563273 RAVER2Q9HCJ3 691 aaKnown RBP14.4□□□□□ -0.1
NSMCE1-204ENST00000563273 PNMA2Q9UL42 364 aa14.4□□□□□ -0.1
NSMCE1-204ENST00000563273 ZNF536O15090 1300 aa14.4□□□□□ -0.1
NSMCE1-204ENST00000563273 SYNGAP1Q96PV0 1343 aa14.4□□□□□ -0.1
NSMCE1-204ENST00000563273 DNM1LO00429 736 aa14.39□□□□□ -0.11
NSMCE1-204ENST00000563273 EVI5O60447 810 aa14.39□□□□□ -0.11
NSMCE1-204ENST00000563273 KCTD1Q719H9 257 aa14.39□□□□□ -0.11
NSMCE1-204ENST00000563273 IQCA1Q86XH1 822 aa14.39□□□□□ -0.11
NSMCE1-204ENST00000563273 CPXCR1Q8N123 301 aa14.39□□□□□ -0.11
NSMCE1-204ENST00000563273 ANKS1AQ92625 1134 aa14.39□□□□□ -0.11
NSMCE1-204ENST00000563273 CNNM2Q9H8M5 875 aa14.39□□□□□ -0.11
NSMCE1-204ENST00000563273 PRR12Q9ULL5 1215 aa14.39□□□□□ -0.11
NSMCE1-204ENST00000563273 PFASO15067 1338 aa14.39□□□□□ -0.11
NSMCE1-204ENST00000563273 NEDD4P46934 1319 aa14.39□□□□□ -0.11
NSMCE1-204ENST00000563273 PGK2P07205 417 aa14.38□□□□□ -0.11
NSMCE1-204ENST00000563273 PDHBP11177 359 aa14.38□□□□□ -0.11
NSMCE1-204ENST00000563273 CHMLP26374 656 aa14.38□□□□□ -0.11
NSMCE1-204ENST00000563273 CNGA1P29973 690 aa14.38□□□□□ -0.11
NSMCE1-204ENST00000563273 IKQ13123 557 aaPredicted RBP14.38□□□□□ -0.11
NSMCE1-204ENST00000563273 ARRDC4Q8NCT1 418 aa14.38□□□□□ -0.11
NSMCE1-204ENST00000563273 DDX11Q96FC9 970 aa14.38□□□□□ -0.11
NSMCE1-204ENST00000563273 KRT23Q9C075 422 aa14.38□□□□□ -0.11
NSMCE1-204ENST00000563273 RANBP17Q9H2T7 1088 aaKnown RBP14.38□□□□□ -0.11
NSMCE1-204ENST00000563273 ACAD9Q9H845 621 aa14.38□□□□□ -0.11
NSMCE1-204ENST00000563273 SLC34A2O95436 690 aa14.37□□□□□ -0.11
NSMCE1-204ENST00000563273 CCDC96Q2M329 555 aa14.37□□□□□ -0.11
NSMCE1-204ENST00000563273 HABP4Q5JVS0 413 aaKnown RBP14.37□□□□□ -0.11
NSMCE1-204ENST00000563273 GPATCH4Q5T3I0 446 aaKnown RBP14.37□□□□□ -0.11
NSMCE1-204ENST00000563273 ANKRD35Q8N283 1001 aa14.37□□□□□ -0.11
NSMCE1-204ENST00000563273 IL25Q9H293 177 aa14.37□□□□□ -0.11
NSMCE1-204ENST00000563273 ISY1Q9ULR0 285 aaKnown RBP14.37□□□□□ -0.11
NSMCE1-204ENST00000563273 MYH4Q9Y623 1939 aa14.37□□□□□ -0.11
NSMCE1-204ENST00000563273 SGSM2O43147 1006 aa14.36□□□□□ -0.11
NSMCE1-204ENST00000563273 KDM4AO75164 1064 aa14.36□□□□□ -0.11
NSMCE1-204ENST00000563273 ICAM1P05362 532 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms