RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 AXDND1Q5T1B0 1012 aaPredicted RBP20.72■□□□□ 0.91
COMMD4-208ENST00000563220 C9orf131Q5VYM1 1079 aa20.72■□□□□ 0.91
COMMD4-208ENST00000563220 DICER1Q9UPY3 1922 aaKnown RBP20.71■□□□□ 0.91
COMMD4-208ENST00000563220 MYH4Q9Y623 1939 aa20.71■□□□□ 0.91
COMMD4-208ENST00000563220 GOLGA6L3A6NEY3 463 aa20.71■□□□□ 0.91
COMMD4-208ENST00000563220 NBPF12Q5TAG4 269 aaPredicted RBP20.71■□□□□ 0.91
COMMD4-208ENST00000563220 CCDC148Q8NFR7 591 aa20.71■□□□□ 0.91
COMMD4-208ENST00000563220 NUP88Q99567 741 aaPredicted RBP20.71■□□□□ 0.91
COMMD4-208ENST00000563220 USP17L10C9JJH3 530 aa20.71■□□□□ 0.91
COMMD4-208ENST00000563220 WNT7AO00755 349 aa20.71■□□□□ 0.91
COMMD4-208ENST00000563220 PPP6R2O75170 966 aa20.71■□□□□ 0.91
COMMD4-208ENST00000563220 NAPAP54920 295 aa20.71■□□□□ 0.91
COMMD4-208ENST00000563220 DAGLBQ8NCG7 672 aa20.71■□□□□ 0.91
COMMD4-208ENST00000563220 RASGRP4Q8TDF6 673 aa20.71■□□□□ 0.91
COMMD4-208ENST00000563220 MTMR8Q96EF0 704 aa20.71■□□□□ 0.91
COMMD4-208ENST00000563220 GMCL1Q96IK5 515 aa20.71■□□□□ 0.91
COMMD4-208ENST00000563220 ZMYND12Q9H0C1 365 aa20.71■□□□□ 0.91
COMMD4-208ENST00000563220 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.71■□□□□ 0.91
COMMD4-208ENST00000563220 ISY1Q9ULR0 285 aaKnown RBP20.71■□□□□ 0.91
COMMD4-208ENST00000563220 SYNPO2Q9UMS6 1093 aa20.71■□□□□ 0.91
COMMD4-208ENST00000563220 TMX2Q9Y320 296 aa20.71■□□□□ 0.91
COMMD4-208ENST00000563220 A0A1W2PQ27 194 aa20.7■□□□□ 0.9
COMMD4-208ENST00000563220 A0A1W2PQ64 194 aa20.7■□□□□ 0.9
COMMD4-208ENST00000563220 A0A1W2PQD8 194 aa20.7■□□□□ 0.9
COMMD4-208ENST00000563220 KIAA1755Q5JYT7 1200 aa20.7■□□□□ 0.9
COMMD4-208ENST00000563220 GALNT17Q6IS24 598 aa20.7■□□□□ 0.9
COMMD4-208ENST00000563220 PIK3AP1Q6ZUJ8 805 aa20.7■□□□□ 0.9
COMMD4-208ENST00000563220 FAM177A1Q8N128 213 aaPredicted RBP20.7■□□□□ 0.9
COMMD4-208ENST00000563220 ARHGEF10LQ9HCE6 1279 aa20.7■□□□□ 0.9
COMMD4-208ENST00000563220 PNMA6FA0A0J9YX94 578 aa20.69■□□□□ 0.9
COMMD4-208ENST00000563220 PPP1R11O60927 126 aaPredicted RBP20.69■□□□□ 0.9
COMMD4-208ENST00000563220 PRAMEF18Q5VWM3 479 aa20.69■□□□□ 0.9
COMMD4-208ENST00000563220 LRSAM1Q6UWE0 723 aa20.69■□□□□ 0.9
COMMD4-208ENST00000563220 FSIP1Q8NA03 581 aa20.69■□□□□ 0.9
COMMD4-208ENST00000563220 COA7Q96BR5 231 aa20.69■□□□□ 0.9
COMMD4-208ENST00000563220 PCDHA6Q9UN73 950 aa20.69■□□□□ 0.9
COMMD4-208ENST00000563220 PCDHA8Q9Y5H6 950 aa20.69■□□□□ 0.9
COMMD4-208ENST00000563220 SMCO2A6NFE2 343 aa20.69■□□□□ 0.9
COMMD4-208ENST00000563220 SNW1Q13573 536 aaKnown RBP20.69■□□□□ 0.9
COMMD4-208ENST00000563220 CCDC84Q86UT8 332 aaPredicted RBP20.69■□□□□ 0.9
COMMD4-208ENST00000563220 SPICE1Q8N0Z3 855 aa20.69■□□□□ 0.9
COMMD4-208ENST00000563220 ENGASEQ8NFI3 743 aa20.69■□□□□ 0.9
COMMD4-208ENST00000563220 GGA3Q9NZ52 723 aa20.69■□□□□ 0.9
COMMD4-208ENST00000563220 ASNSP08243 561 aa20.68■□□□□ 0.9
COMMD4-208ENST00000563220 BMP3P12645 472 aa20.68■□□□□ 0.9
COMMD4-208ENST00000563220 APOBEC3FQ8IUX4 373 aaKnown RBP20.68■□□□□ 0.9
COMMD4-208ENST00000563220 CCDC12Q8WUD4 166 aaPredicted RBP20.68■□□□□ 0.9
COMMD4-208ENST00000563220 MRPS27Q92552 414 aaKnown RBP20.68■□□□□ 0.9
COMMD4-208ENST00000563220 CLIC6Q96NY7 704 aa20.68■□□□□ 0.9
COMMD4-208ENST00000563220 GLIS2Q9BZE0 524 aaPredicted RBP20.68■□□□□ 0.9
COMMD4-208ENST00000563220 DDX19AQ9NUU7 478 aaKnown RBP20.68■□□□□ 0.9
COMMD4-208ENST00000563220 TRIM75PA6NK02 468 aa20.67■□□□□ 0.9
COMMD4-208ENST00000563220 hCG_1984214I3L0E3 225 aa20.67■□□□□ 0.9
COMMD4-208ENST00000563220 ZBTB5O15062 677 aa20.67■□□□□ 0.9
COMMD4-208ENST00000563220 CAMK4Q16566 473 aa20.67■□□□□ 0.9
COMMD4-208ENST00000563220 ZNF713Q8N859 430 aaPredicted RBP20.67■□□□□ 0.9
COMMD4-208ENST00000563220 JMYQ8N9B5 988 aa20.67■□□□□ 0.9
COMMD4-208ENST00000563220 NOL7Q9UMY1 257 aaKnown RBP20.67■□□□□ 0.9
COMMD4-208ENST00000563220 A0A1B0GVL5 298 aa20.67■□□□□ 0.9
COMMD4-208ENST00000563220 TMEM232C9JQI7 657 aa20.67■□□□□ 0.9
COMMD4-208ENST00000563220 LETM1O95202 739 aaPredicted RBP20.67■□□□□ 0.9
COMMD4-208ENST00000563220 NUP62CLQ9H1M0 184 aa20.67■□□□□ 0.9
COMMD4-208ENST00000563220 C6orf50Q9HD87 102 aa20.67■□□□□ 0.9
COMMD4-208ENST00000563220 MRVI1Q9Y6F6 885 aa20.67■□□□□ 0.9
COMMD4-208ENST00000563220 ESYT2A0FGR8 921 aa20.66■□□□□ 0.9
COMMD4-208ENST00000563220 CMA1P23946 247 aa20.66■□□□□ 0.9
COMMD4-208ENST00000563220 GNA11P29992 359 aa20.66■□□□□ 0.9
COMMD4-208ENST00000563220 ZNF174Q15697 407 aa20.66■□□□□ 0.9
COMMD4-208ENST00000563220 TTC38Q5R3I4 469 aa20.66■□□□□ 0.9
COMMD4-208ENST00000563220 CCDC73Q6ZRK6 1079 aa20.66■□□□□ 0.9
COMMD4-208ENST00000563220 CLSTN2Q9H4D0 955 aa20.66■□□□□ 0.9
COMMD4-208ENST00000563220 CTNND1O60716 968 aaKnown RBP20.65■□□□□ 0.9
COMMD4-208ENST00000563220 INPP5BP32019 993 aa20.65■□□□□ 0.9
COMMD4-208ENST00000563220 TRAPPC10P48553 1259 aa20.65■□□□□ 0.9
COMMD4-208ENST00000563220 NDUFA8P51970 172 aa20.65■□□□□ 0.9
COMMD4-208ENST00000563220 FAM160A1Q05DH4 1040 aa20.65■□□□□ 0.9
COMMD4-208ENST00000563220 QRICH1Q2TAL8 776 aa20.65■□□□□ 0.9
COMMD4-208ENST00000563220 SHC4Q6S5L8 630 aa20.65■□□□□ 0.9
COMMD4-208ENST00000563220 BTNL9Q6UXG8 535 aa20.65■□□□□ 0.9
COMMD4-208ENST00000563220 VCPKMTQ9H867 229 aa20.65■□□□□ 0.9
COMMD4-208ENST00000563220 ADARB2Q9NS39 739 aaKnown RBP20.65■□□□□ 0.9
COMMD4-208ENST00000563220 FBXO2Q9UK22 296 aaPredicted RBP20.65■□□□□ 0.9
COMMD4-208ENST00000563220 CEP131Q9UPN4 1083 aa20.65■□□□□ 0.9
COMMD4-208ENST00000563220 CUTAO60888 179 aa20.64■□□□□ 0.9
COMMD4-208ENST00000563220 PTPREP23469 700 aa20.64■□□□□ 0.9
COMMD4-208ENST00000563220 LMOD1P29536 600 aaPredicted RBP20.64■□□□□ 0.9
COMMD4-208ENST00000563220 GRIN1Q05586 938 aa20.64■□□□□ 0.9
COMMD4-208ENST00000563220 FMR1NBQ8N0W7 255 aaPredicted RBP20.64■□□□□ 0.9
COMMD4-208ENST00000563220 KRI1Q8N9T8 703 aaKnown RBP20.64■□□□□ 0.9
COMMD4-208ENST00000563220 GOPCQ9HD26 462 aa20.64■□□□□ 0.9
COMMD4-208ENST00000563220 CCDC194A0A1B0GVG4 234 aa20.64■□□□□ 0.89
COMMD4-208ENST00000563220 SNAP25P60880 206 aa20.64■□□□□ 0.89
COMMD4-208ENST00000563220 ZYXQ15942 572 aaKnown RBP20.64■□□□□ 0.89
COMMD4-208ENST00000563220 CDC37Q16543 378 aaPredicted RBP20.64■□□□□ 0.89
COMMD4-208ENST00000563220 SYDE2Q5VT97 1194 aa20.64■□□□□ 0.89
COMMD4-208ENST00000563220 FZD1Q9UP38 647 aa20.64■□□□□ 0.89
COMMD4-208ENST00000563220 GPR162Q16538 588 aa20.63■□□□□ 0.89
COMMD4-208ENST00000563220 FAM83BQ5T0W9 1011 aa20.63■□□□□ 0.89
COMMD4-208ENST00000563220 DCAF15Q66K64 600 aa20.63■□□□□ 0.89
COMMD4-208ENST00000563220 ZNF341Q9BYN7 854 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms