RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 EEF2P13639 858 aaKnown RBP10.75□□□□□ -0.69
LINC00838-201ENST00000562956 MCM7P33993 719 aa10.75□□□□□ -0.69
LINC00838-201ENST00000562956 TRAPPC10P48553 1259 aa10.75□□□□□ -0.69
LINC00838-201ENST00000562956 JAG1P78504 1218 aa10.75□□□□□ -0.69
LINC00838-201ENST00000562956 CXCL9Q07325 125 aa10.75□□□□□ -0.69
LINC00838-201ENST00000562956 TTBK2Q6IQ55 1244 aa10.75□□□□□ -0.69
LINC00838-201ENST00000562956 SIAH1Q8IUQ4 282 aa10.75□□□□□ -0.69
LINC00838-201ENST00000562956 ZMYND12Q9H0C1 365 aa10.75□□□□□ -0.69
LINC00838-201ENST00000562956 ZNF70Q9UC06 446 aaPredicted RBP10.75□□□□□ -0.69
LINC00838-201ENST00000562956 HDAC9Q9UKV0 1011 aa10.75□□□□□ -0.69
LINC00838-201ENST00000562956 BIN1O00499 593 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 ATP2C1P98194 919 aaPredicted RBP10.74□□□□□ -0.69
LINC00838-201ENST00000562956 RRP1BQ14684 758 aaKnown RBP10.74□□□□□ -0.69
LINC00838-201ENST00000562956 SEPT2Q15019 361 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 IQCB1Q15051 598 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 GALNT17Q6IS24 598 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 KRBA2Q6ZNG9 492 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 ANO10Q9NW15 660 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 SMCO2A6NFE2 343 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 NFKBIEO00221 500 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 POLR2DO15514 142 aaKnown RBP10.74□□□□□ -0.69
LINC00838-201ENST00000562956 CAVIN2O95810 425 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 BMP15O95972 392 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 MSNP26038 577 aaKnown RBP10.74□□□□□ -0.69
LINC00838-201ENST00000562956 PNOCQ13519 176 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 KCTD1Q719H9 257 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 ADGRF4Q8IZF3 695 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 CNNM3Q8NE01 707 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 TAOK3Q9H2K8 898 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 KANSL2Q9H9L4 492 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 PRDM4Q9UKN5 801 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 CCDC194A0A1B0GVG4 234 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 FOXN1O15353 648 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 SLC16A2P36021 539 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 ABCB5Q2M3G0 1257 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 DPCR1Q3MIW9 517 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 AGBL3Q8NEM8 1001 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 FERMT2Q96AC1 680 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 EPSTI1Q96J88 318 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 SGIP1Q9BQI5 828 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 JMJD4Q9H9V9 463 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 TMOD2Q9NZR1 351 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 NYAP2Q9P242 653 aa10.74□□□□□ -0.69
LINC00838-201ENST00000562956 GREB1LQ9C091 1923 aaPredicted RBP10.73□□□□□ -0.69
LINC00838-201ENST00000562956 SHTN1A0MZ66 631 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 VWA3AA6NCI4 1184 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 RAD21O60216 631 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 IL17AQ16552 155 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 INF2Q27J81 1249 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 CCDC96Q2M329 555 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 SPDYE2Q495Y8 402 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 TMEM179Q6ZVK1 233 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 FAM177A1Q8N128 213 aaPredicted RBP10.73□□□□□ -0.69
LINC00838-201ENST00000562956 PDILTQ8N807 584 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 CCDC12Q8WUD4 166 aaPredicted RBP10.73□□□□□ -0.69
LINC00838-201ENST00000562956 MKL1Q969V6 931 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 COA7Q96BR5 231 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 CNTNAP1P78357 1384 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 COL2A1P02458 1487 aaPredicted RBP10.73□□□□□ -0.69
LINC00838-201ENST00000562956 UTRNP46939 3433 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 PSME4Q14997 1843 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 A0A087X0B3 334 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 GH2P01242 217 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 MDM2Q00987 491 aaPredicted RBP10.73□□□□□ -0.69
LINC00838-201ENST00000562956 ICA1Q05084 483 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 PPP4R3BQ5MIZ7 849 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 GPATCH4Q5T3I0 446 aaKnown RBP10.73□□□□□ -0.69
LINC00838-201ENST00000562956 ISM2Q6H9L7 571 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 DHX40Q8IX18 779 aaKnown RBP10.73□□□□□ -0.69
LINC00838-201ENST00000562956 C4orf32Q8N8J7 132 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 SYMPKQ92797 1274 aaKnown RBP10.73□□□□□ -0.69
LINC00838-201ENST00000562956 VEZTQ9HBM0 779 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 SERTAD1Q9UHV2 236 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 TUBE1Q9UJT0 475 aa10.73□□□□□ -0.69
LINC00838-201ENST00000562956 PPP1R11O60927 126 aaPredicted RBP10.72□□□□□ -0.69
LINC00838-201ENST00000562956 CDAN1Q8IWY9 1227 aa10.72□□□□□ -0.69
LINC00838-201ENST00000562956 FAM151AQ8WW52 585 aa10.72□□□□□ -0.69
LINC00838-201ENST00000562956 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.72□□□□□ -0.69
LINC00838-201ENST00000562956 C6orf50Q9HD87 102 aa10.72□□□□□ -0.69
LINC00838-201ENST00000562956 BCS1LQ9Y276 419 aa10.72□□□□□ -0.69
LINC00838-201ENST00000562956 PSDA5PKW4 1024 aaPredicted RBP10.72□□□□□ -0.69
LINC00838-201ENST00000562956 USP17L10C9JJH3 530 aa10.72□□□□□ -0.69
LINC00838-201ENST00000562956 ACTN4O43707 911 aaKnown RBP10.72□□□□□ -0.69
LINC00838-201ENST00000562956 GNA11P29992 359 aa10.72□□□□□ -0.69
LINC00838-201ENST00000562956 ZRSR1Q15695 479 aaKnown RBP10.72□□□□□ -0.69
LINC00838-201ENST00000562956 HS1BP3Q53T59 392 aa10.72□□□□□ -0.69
LINC00838-201ENST00000562956 CIAPIN1Q6FI81 312 aa10.72□□□□□ -0.69
LINC00838-201ENST00000562956 CEP57L1Q8IYX8 460 aa10.72□□□□□ -0.69
LINC00838-201ENST00000562956 JDP2Q8WYK2 163 aa10.72□□□□□ -0.69
LINC00838-201ENST00000562956 MYH8P13535 1937 aa10.72□□□□□ -0.69
LINC00838-201ENST00000562956 PNMA6FA0A0J9YX94 578 aa10.71□□□□□ -0.69
LINC00838-201ENST00000562956 SLC1A4P43007 532 aa10.71□□□□□ -0.69
LINC00838-201ENST00000562956 NLRP12P59046 1061 aa10.71□□□□□ -0.69
LINC00838-201ENST00000562956 NBPF9Q3BBW0 867 aa10.71□□□□□ -0.69
LINC00838-201ENST00000562956 RBM26Q5T8P6 1007 aaKnown RBP10.71□□□□□ -0.69
LINC00838-201ENST00000562956 SLFN13Q68D06 897 aa10.71□□□□□ -0.69
LINC00838-201ENST00000562956 GRAMD1CQ8IYS0 662 aa10.71□□□□□ -0.69
LINC00838-201ENST00000562956 MTMR14Q8NCE2 650 aa10.71□□□□□ -0.69
LINC00838-201ENST00000562956 TMEM39BQ9GZU3 492 aa10.71□□□□□ -0.69
LINC00838-201ENST00000562956 HERC5Q9UII4 1024 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms