RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 MROH8Q9H579 483 aa11.21□□□□□ -0.61
NSMCE1-203ENST00000562039 ANAPC4Q9UJX5 808 aa11.21□□□□□ -0.61
NSMCE1-203ENST00000562039 ZNF214Q9UL59 606 aaPredicted RBP11.21□□□□□ -0.61
NSMCE1-203ENST00000562039 ADAMTS5Q9UNA0 930 aa11.21□□□□□ -0.61
NSMCE1-203ENST00000562039 PLIN4Q96Q06 1357 aa11.2□□□□□ -0.62
NSMCE1-203ENST00000562039 ZNFX1Q9P2E3 1918 aaKnown RBP11.2□□□□□ -0.62
NSMCE1-203ENST00000562039 ORC4O43929 436 aa11.2□□□□□ -0.62
NSMCE1-203ENST00000562039 ZBED4O75132 1171 aa11.2□□□□□ -0.62
NSMCE1-203ENST00000562039 FCER1AP12319 257 aa11.2□□□□□ -0.62
NSMCE1-203ENST00000562039 SLC16A2P36021 539 aa11.2□□□□□ -0.62
NSMCE1-203ENST00000562039 SLC1A4P43007 532 aa11.2□□□□□ -0.62
NSMCE1-203ENST00000562039 TTBK2Q6IQ55 1244 aa11.2□□□□□ -0.62
NSMCE1-203ENST00000562039 MFSD6Q6ZSS7 791 aa11.2□□□□□ -0.62
NSMCE1-203ENST00000562039 UBE2Q1Q7Z7E8 422 aa11.2□□□□□ -0.62
NSMCE1-203ENST00000562039 RIOX2Q8IUF8 465 aa11.2□□□□□ -0.62
NSMCE1-203ENST00000562039 TRMT44Q8IYL2 757 aaKnown RBP11.2□□□□□ -0.62
NSMCE1-203ENST00000562039 GPCPD1Q9NPB8 672 aa11.2□□□□□ -0.62
NSMCE1-203ENST00000562039 B4E1Z4 1266 aa11.19□□□□□ -0.62
NSMCE1-203ENST00000562039 ZNF213O14771 459 aa11.19□□□□□ -0.62
NSMCE1-203ENST00000562039 SLC25A27O95847 323 aa11.19□□□□□ -0.62
NSMCE1-203ENST00000562039 MNX1P50219 401 aaPredicted RBP11.19□□□□□ -0.62
NSMCE1-203ENST00000562039 KCTD2Q14681 263 aa11.19□□□□□ -0.62
NSMCE1-203ENST00000562039 AKNAD1Q5T1N1 836 aa11.19□□□□□ -0.62
NSMCE1-203ENST00000562039 LHX8Q68G74 356 aa11.19□□□□□ -0.62
NSMCE1-203ENST00000562039 NECAB2Q7Z6G3 386 aa11.19□□□□□ -0.62
NSMCE1-203ENST00000562039 C7orf61Q8IZ16 206 aa11.19□□□□□ -0.62
NSMCE1-203ENST00000562039 PRPF38AQ8NAV1 312 aaKnown RBP11.19□□□□□ -0.62
NSMCE1-203ENST00000562039 GMCL1P1Q8NEA9 526 aa11.19□□□□□ -0.62
NSMCE1-203ENST00000562039 LENG1Q96BZ8 264 aaPredicted RBP11.19□□□□□ -0.62
NSMCE1-203ENST00000562039 AGBL1Q96MI9 1066 aa11.19□□□□□ -0.62
NSMCE1-203ENST00000562039 TMEM47Q9BQJ4 181 aa11.19□□□□□ -0.62
NSMCE1-203ENST00000562039 HTATIP2Q9BUP3 242 aa11.19□□□□□ -0.62
NSMCE1-203ENST00000562039 FEM1BQ9UK73 627 aa11.19□□□□□ -0.62
NSMCE1-203ENST00000562039 DDX49Q9Y6V7 483 aaKnown RBP11.19□□□□□ -0.62
NSMCE1-203ENST00000562039 STRNO43815 780 aa11.18□□□□□ -0.62
NSMCE1-203ENST00000562039 EVI5O60447 810 aa11.18□□□□□ -0.62
NSMCE1-203ENST00000562039 HOXC6P09630 235 aa11.18□□□□□ -0.62
NSMCE1-203ENST00000562039 MFAP1P55081 439 aaKnown RBP11.18□□□□□ -0.62
NSMCE1-203ENST00000562039 GJC2Q5T442 439 aaPredicted RBP11.18□□□□□ -0.62
NSMCE1-203ENST00000562039 DDX11Q96FC9 970 aa11.18□□□□□ -0.62
NSMCE1-203ENST00000562039 MAML3Q96JK9 1138 aa11.18□□□□□ -0.62
NSMCE1-203ENST00000562039 TEX13BQ9BXU2 312 aa11.18□□□□□ -0.62
NSMCE1-203ENST00000562039 CPVLQ9H3G5 476 aa11.18□□□□□ -0.62
NSMCE1-203ENST00000562039 C11orf49Q9H6J7 331 aa11.18□□□□□ -0.62
NSMCE1-203ENST00000562039 DDX20Q9UHI6 824 aaKnown RBP11.18□□□□□ -0.62
NSMCE1-203ENST00000562039 OGDHLQ9ULD0 1010 aa11.18□□□□□ -0.62
NSMCE1-203ENST00000562039 ZMYND8Q9ULU4 1186 aaPredicted RBP11.18□□□□□ -0.62
NSMCE1-203ENST00000562039 COLQQ9Y215 455 aaPredicted RBP11.18□□□□□ -0.62
NSMCE1-203ENST00000562039 HIP1O00291 1037 aa11.17□□□□□ -0.62
NSMCE1-203ENST00000562039 KDM4AO75164 1064 aa11.17□□□□□ -0.62
NSMCE1-203ENST00000562039 FGRP09769 529 aa11.17□□□□□ -0.62
NSMCE1-203ENST00000562039 GOLGA8HP0CJ92 632 aa11.17□□□□□ -0.62
NSMCE1-203ENST00000562039 ALAS1P13196 640 aa11.17□□□□□ -0.62
NSMCE1-203ENST00000562039 CYBAP13498 195 aa11.17□□□□□ -0.62
NSMCE1-203ENST00000562039 SYN1P17600 705 aa11.17□□□□□ -0.62
NSMCE1-203ENST00000562039 STAT2P52630 851 aa11.17□□□□□ -0.62
NSMCE1-203ENST00000562039 ATN1P54259 1190 aaPredicted RBP11.17□□□□□ -0.62
NSMCE1-203ENST00000562039 PTH1RQ03431 593 aa11.17□□□□□ -0.62
NSMCE1-203ENST00000562039 ZNF792Q3KQV3 632 aa11.17□□□□□ -0.62
NSMCE1-203ENST00000562039 RCSD1Q6JBY9 416 aa11.17□□□□□ -0.62
NSMCE1-203ENST00000562039 CHRDL2Q6WN34 429 aa11.17□□□□□ -0.62
NSMCE1-203ENST00000562039 STAG1Q8WVM7 1258 aa11.17□□□□□ -0.62
NSMCE1-203ENST00000562039 SLC38A10Q9HBR0 1119 aa11.17□□□□□ -0.62
NSMCE1-203ENST00000562039 PRR12Q9ULL5 1215 aa11.17□□□□□ -0.62
NSMCE1-203ENST00000562039 ALPK3Q96L96 1907 aa11.17□□□□□ -0.62
NSMCE1-203ENST00000562039 PFASO15067 1338 aa11.16□□□□□ -0.62
NSMCE1-203ENST00000562039 TOP1P11387 765 aaKnown RBP11.16□□□□□ -0.62
NSMCE1-203ENST00000562039 CHMLP26374 656 aa11.16□□□□□ -0.62
NSMCE1-203ENST00000562039 MUM1L1Q5H9M0 696 aa11.16□□□□□ -0.62
NSMCE1-203ENST00000562039 OLFML2BQ68BL8 750 aa11.16□□□□□ -0.62
NSMCE1-203ENST00000562039 FAM160B2Q86V87 743 aa11.16□□□□□ -0.62
NSMCE1-203ENST00000562039 ANKRD35Q8N283 1001 aa11.16□□□□□ -0.62
NSMCE1-203ENST00000562039 CHURC1Q8WUH1 139 aa11.16□□□□□ -0.62
NSMCE1-203ENST00000562039 GMCL1Q96IK5 515 aa11.16□□□□□ -0.62
NSMCE1-203ENST00000562039 PURBQ96QR8 312 aaKnown RBP11.16□□□□□ -0.62
NSMCE1-203ENST00000562039 SENP6Q9GZR1 1112 aaPredicted RBP11.16□□□□□ -0.62
NSMCE1-203ENST00000562039 RNF41Q9H4P4 317 aaPredicted RBP11.16□□□□□ -0.62
NSMCE1-203ENST00000562039 RNF146Q9NTX7 359 aa11.16□□□□□ -0.62
NSMCE1-203ENST00000562039 SLC5A4Q9NY91 659 aa11.16□□□□□ -0.62
NSMCE1-203ENST00000562039 TAF6LQ9Y6J9 622 aa11.16□□□□□ -0.62
NSMCE1-203ENST00000562039 PLXNA1Q9UIW2 1896 aa11.16□□□□□ -0.62
NSMCE1-203ENST00000562039 SMCHD1A6NHR9 2005 aa11.16□□□□□ -0.62
NSMCE1-203ENST00000562039 ZNF536O15090 1300 aa11.15□□□□□ -0.62
NSMCE1-203ENST00000562039 ZMYM6O95789 1325 aa11.15□□□□□ -0.62
NSMCE1-203ENST00000562039 CNTN2Q02246 1040 aa11.15□□□□□ -0.62
NSMCE1-203ENST00000562039 IMMTQ16891 758 aaKnown RBP11.15□□□□□ -0.62
NSMCE1-203ENST00000562039 SYDE2Q5VT97 1194 aa11.15□□□□□ -0.62
NSMCE1-203ENST00000562039 ABRAQ8N0Z2 381 aa11.15□□□□□ -0.62
NSMCE1-203ENST00000562039 ANKLE1Q8NAG6 615 aa11.15□□□□□ -0.62
NSMCE1-203ENST00000562039 DCAF4Q8WV16 495 aa11.15□□□□□ -0.62
NSMCE1-203ENST00000562039 ESR2Q92731 530 aa11.15□□□□□ -0.62
NSMCE1-203ENST00000562039 FERMT2Q96AC1 680 aa11.15□□□□□ -0.62
NSMCE1-203ENST00000562039 TRERF1Q96PN7 1200 aa11.15□□□□□ -0.62
NSMCE1-203ENST00000562039 TINF2Q9BSI4 451 aa11.15□□□□□ -0.62
NSMCE1-203ENST00000562039 DSCC1Q9BVC3 393 aa11.15□□□□□ -0.62
NSMCE1-203ENST00000562039 UBA5Q9GZZ9 404 aa11.15□□□□□ -0.62
NSMCE1-203ENST00000562039 ZHX1Q9UKY1 873 aaPredicted RBP11.15□□□□□ -0.62
NSMCE1-203ENST00000562039 FRMPD3Q5JV73 1810 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 ZNF236Q9UL36 1845 aa11.14□□□□□ -0.63
NSMCE1-203ENST00000562039 SNAI1O95863 264 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms